ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479642.1| Oryza sativa (japonica cultivar-group), mRNA 70 7e-09
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
3dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
4ref|NM_001285.1| Homo sapiens chloride channel, calcium activate... 42 1.6
5gb|AY570630.1| Uncultured bacterium clone PL-37B6 16S ribosomal ... 42 1.6
6ref|NM_190435.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
7gb|AC115855.9| Mus musculus chromosome 3, clone RP24-277E17, com... 42 1.6
8ref|NM_017474.1| Mus musculus chloride channel calcium activated... 42 1.6
9gb|AY581306.1| Macaca mulatta calcium-activated chloride channel... 42 1.6
10ref|NM_001032912.1| Macaca mulatta calcium-activated chloride ch... 42 1.6
11gb|AY512583.1| Oryza sativa iron-phytosiderophore transporter pr... 42 1.6
12emb|CR339052.6| Zebrafish DNA sequence from clone CH211-218E6 in... 42 1.6
13gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome... 42 1.6
14gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.6
15emb|AL122002.16|HSJ651E10 Human DNA sequence from clone RP4-651E... 42 1.6
16gb|AC119749.2| Homo sapiens chromosome 1 clone RP11-444C12, comp... 42 1.6
17dbj|AB190926.1| Oryza sativa (japonica cultivar-group) osysl18 m... 42 1.6
18dbj|AK097057.1| Homo sapiens cDNA FLJ39738 fis, clone SMINT20164... 42 1.6
19dbj|AK136476.1| Mus musculus adult male colon cDNA, RIKEN full-l... 42 1.6
20dbj|AK008659.2| Mus musculus adult male stomach cDNA, RIKEN full... 42 1.6
21dbj|AK033560.1| Mus musculus adult male colon cDNA, RIKEN full-l... 42 1.6
22dbj|AK007466.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 42 1.6
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
26gb|AY953241.1| Uncultured anaerobic bacterium clone A-3P 16S rib... 42 1.6
27dbj|AK024970.1| Homo sapiens cDNA: FLJ21317 fis, clone COL02275,... 42 1.6
28dbj|AK070618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
29gb|AF127036.1|AF127036 Homo sapiens calcium-activated chloride c... 42 1.6
30gb|AF039401.1|AF039401 Homo sapiens calcium-dependent chloride c... 42 1.6
31gb|AF039400.1|AF039400 Homo sapiens calcium-dependent chloride c... 42 1.6
32emb|AJ488072.1|UBA488072 Uncultured bacterium partial 16S rRNA g... 42 1.6
33gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complet... 42 1.6
34gb|BC028343.1| Mus musculus chloride channel calcium activated 3... 42 1.6
35dbj|AB017156.1| Mus musculus gob-5 mRNA, complete cds 42 1.6
36ref|NM_197626.1| Oryza sativa (japonica cultivar-group) putative... 40 6.4
37emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in ... 40 6.4
38gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.4
39gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen... 40 6.4
40dbj|AK157592.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.4
41emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chro... 40 6.4
42dbj|AB126869.1| Danio rerio INF-g gene for interferon gamma, com... 40 6.4
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
44dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
45gb|AC092843.4| Homo sapiens BAC clone RP11-419O4 from 2, complet... 40 6.4
46dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
47emb|BX005382.6| Zebrafish DNA sequence from clone DKEY-242E14, c... 40 6.4
48ref|XM_318953.2| Anopheles gambiae str. PEST ENSANGP00000015142 ... 40 6.4
49dbj|AK070040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
50emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in... 40 6.4
51dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.4
52dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 6.4
53dbj|AP004442.1| Cottus reinii mitochondrial DNA, complete genome 40 6.4
54gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
55emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on ch... 40 6.4
56emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1... 40 6.4 
>ref|XM_479642.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 246

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 8   caatttccaatttgagcgtcatgtagctcgtcttgaatctagacagcagca 58
           |||| |||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 162 caatgtccaatttgaacgtcaagtagctcgtcttgaatcaagacagcagca 212
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
             complete sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 24    cgtcatgtagctcgtcttgaatctagacagcagca 58
             ||||| ||||||||||||||||| |||||||||||
Sbjct: 41727 cgtcaagtagctcgtcttgaatcaagacagcagca 41761



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 127   catctccagaagatagccttgac 149
             |||||||||||||||||||||||
Sbjct: 42050 catctccagaagatagccttgac 42072
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>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1147B12
          Length = 127902

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 24    cgtcatgtagctcgtcttgaatctagacagcagca 58
             ||||| ||||||||||||||||| |||||||||||
Sbjct: 41727 cgtcaagtagctcgtcttgaatcaagacagcagca 41761



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 127   catctccagaagatagccttgac 149
             |||||||||||||||||||||||
Sbjct: 42050 catctccagaagatagccttgac 42072
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>ref|NM_001285.1| Homo sapiens chloride channel, calcium activated, family member 1
            (CLCA1), mRNA
          Length = 3311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1552 ccaactgatggatctgaaatt 1572
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>gb|AY570630.1| Uncultured bacterium clone PL-37B6 16S ribosomal RNA gene, partial
           sequence
          Length = 1483

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 191 tgtggcagatgaacctctcag 211
           |||||||||||||||||||||
Sbjct: 323 tgtggcagatgaacctctcag 303
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>ref|NM_190435.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 20   tgagcgtcatgtagctcgtcttgaa 44
            ||||||||| |||||||||||||||
Sbjct: 1459 tgagcgtcaggtagctcgtcttgaa 1435
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>gb|AC115855.9| Mus musculus chromosome 3, clone RP24-277E17, complete sequence
          Length = 182349

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   ccaactgatggatctgaaatt 404
             |||||||||||||||||||||
Sbjct: 36125 ccaactgatggatctgaaatt 36145
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>ref|NM_017474.1| Mus musculus chloride channel calcium activated 3 (Clca3), mRNA
          Length = 2937

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1218 ccaactgatggatctgaaatt 1238
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>gb|AY581306.1| Macaca mulatta calcium-activated chloride channel family member 1
            (CLCA1) mRNA, complete cds
          Length = 2776

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1217 ccaactgatggatctgaaatt 1237
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>ref|NM_001032912.1| Macaca mulatta calcium-activated chloride channel family member 1
            (CLCA1), mRNA
          Length = 2776

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1217 ccaactgatggatctgaaatt 1237
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>gb|AY512583.1| Oryza sativa iron-phytosiderophore transporter protein yellow stripe
            1 mRNA, complete cds
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 20   tgagcgtcatgtagctcgtcttgaa 44
            ||||||||| |||||||||||||||
Sbjct: 1459 tgagcgtcaggtagctcgtcttgaa 1435
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>emb|CR339052.6| Zebrafish DNA sequence from clone CH211-218E6 in linkage group 10,
             complete sequence
          Length = 127879

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   agaaaatattcagctaattaa 230
             |||||||||||||||||||||
Sbjct: 45566 agaaaatattcagctaattaa 45546
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>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence
          Length = 159785

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   ttcaggtttctcagacaatac 295
             |||||||||||||||||||||
Sbjct: 68996 ttcaggtttctcagacaatac 69016
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>gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-160L19, complete
             sequence
          Length = 165686

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   cagatgaacctctcagaaaat 216
             |||||||||||||||||||||
Sbjct: 46378 cagatgaacctctcagaaaat 46358
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>emb|AL122002.16|HSJ651E10 Human DNA sequence from clone RP4-651E10 on chromosome 1p22.3-31.1
             Contains the CLCA1 gene for chloride channel calcium
             activated family member 1, the CLCA4 gene for chloride
             channel calcium activated family member 4, a cell division
             cycle associated 4 (CDCA4) pseudogene and the 3' end of a
             novel gene, complete sequence
          Length = 113764

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   ccaactgatggatctgaaatt 404
             |||||||||||||||||||||
Sbjct: 21984 ccaactgatggatctgaaatt 22004
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>gb|AC119749.2| Homo sapiens chromosome 1 clone RP11-444C12, complete sequence
          Length = 152000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    ccaactgatggatctgaaatt 404
              |||||||||||||||||||||
Sbjct: 104692 ccaactgatggatctgaaatt 104712
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>dbj|AB190926.1| Oryza sativa (japonica cultivar-group) osysl18 mRNA for hypothetical
            protein, complete cds
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 20   tgagcgtcatgtagctcgtcttgaa 44
            ||||||||| |||||||||||||||
Sbjct: 1459 tgagcgtcaggtagctcgtcttgaa 1435
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>dbj|AK097057.1| Homo sapiens cDNA FLJ39738 fis, clone SMINT2016412, highly similar to
            Homo sapiens calcium-dependent chloride channel-1
            (hCLCA1) mRNA
          Length = 2615

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1063 ccaactgatggatctgaaatt 1083
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>dbj|AK136476.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
            library, clone:9030614H17 product:chloride channel
            calcium activated 3, full insert sequence
          Length = 2914

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1232 ccaactgatggatctgaaatt 1252
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>dbj|AK008659.2| Mus musculus adult male stomach cDNA, RIKEN full-length enriched
            library, clone:2210006G11 product:chloride channel
            calcium activated 3, full insert sequence
          Length = 2933

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1232 ccaactgatggatctgaaatt 1252
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>dbj|AK033560.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
            library, clone:9030623F02 product:chloride channel
            calcium activated 3, full insert sequence
          Length = 3658

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1236 ccaactgatggatctgaaatt 1256
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>dbj|AK007466.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
            enriched library, clone:1810012P03 product:chloride
            channel calcium activated 3, full insert sequence
          Length = 2915

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1232 ccaactgatggatctgaaatt 1252
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 20       tgagcgtcatgtagctcgtcttgaa 44
                ||||||||| |||||||||||||||
Sbjct: 35496008 tgagcgtcaggtagctcgtcttgaa 35496032
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>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446G04
          Length = 143515

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 20    tgagcgtcatgtagctcgtcttgaa 44
             ||||||||| |||||||||||||||
Sbjct: 26195 tgagcgtcaggtagctcgtcttgaa 26219
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088C09
          Length = 154084

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 20     tgagcgtcatgtagctcgtcttgaa 44
              ||||||||| |||||||||||||||
Sbjct: 119957 tgagcgtcaggtagctcgtcttgaa 119981
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>gb|AY953241.1| Uncultured anaerobic bacterium clone A-3P 16S ribosomal RNA gene,
           partial sequence
          Length = 1355

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 191 tgtggcagatgaacctctcag 211
           |||||||||||||||||||||
Sbjct: 290 tgtggcagatgaacctctcag 270
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>dbj|AK024970.1| Homo sapiens cDNA: FLJ21317 fis, clone COL02275, highly similar to
           AF127036 Homo sapiens calcium-activated chloride channel
           protein 1 (CaCC1) mRNA
          Length = 2022

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 384 ccaactgatggatctgaaatt 404
           |||||||||||||||||||||
Sbjct: 414 ccaactgatggatctgaaatt 434
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>dbj|AK070618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063A19, full
            insert sequence
          Length = 2506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 20   tgagcgtcatgtagctcgtcttgaa 44
            ||||||||| |||||||||||||||
Sbjct: 1753 tgagcgtcaggtagctcgtcttgaa 1729
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>gb|AF127036.1|AF127036 Homo sapiens calcium-activated chloride channel protein 1 (CaCC1)
            mRNA, complete cds
          Length = 2826

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1205 ccaactgatggatctgaaatt 1225
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>gb|AF039401.1|AF039401 Homo sapiens calcium-dependent chloride channel-1 (hCLCA1) gene,
             complete cds
          Length = 35278

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   ccaactgatggatctgaaatt 404
             |||||||||||||||||||||
Sbjct: 22271 ccaactgatggatctgaaatt 22291
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>gb|AF039400.1|AF039400 Homo sapiens calcium-dependent chloride channel-1 (hCLCA1) mRNA,
            complete cds
          Length = 3311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1552 ccaactgatggatctgaaatt 1572
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>emb|AJ488072.1|UBA488072 Uncultured bacterium partial 16S rRNA gene, clone IA-19
          Length = 1509

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 191 tgtggcagatgaacctctcag 211
           |||||||||||||||||||||
Sbjct: 322 tgtggcagatgaacctctcag 302
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>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence
          Length = 166132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 275  ttcaggtttctcagacaatac 295
            |||||||||||||||||||||
Sbjct: 2045 ttcaggtttctcagacaatac 2065
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>gb|BC028343.1| Mus musculus chloride channel calcium activated 3, mRNA (cDNA clone
            MGC:13795 IMAGE:4217548), complete cds
          Length = 2975

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1225 ccaactgatggatctgaaatt 1245
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>dbj|AB017156.1| Mus musculus gob-5 mRNA, complete cds
          Length = 2937

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  ccaactgatggatctgaaatt 404
            |||||||||||||||||||||
Sbjct: 1218 ccaactgatggatctgaaatt 1238
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>ref|NM_197626.1| Oryza sativa (japonica cultivar-group) putative anion transporter
           (OSJNBa0001O14.19), mRNA
          Length = 1458

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 ctcggcatcctccccgccat 168
           ||||||||||||||||||||
Sbjct: 544 ctcggcatcctccccgccat 563
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>emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in linkage group 11,
             complete sequence
          Length = 231837

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   caattattttcttgcatttt 188
             ||||||||||||||||||||
Sbjct: 75089 caattattttcttgcatttt 75070
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>gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-240H6, complete
              sequence
          Length = 197273

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    cagatgaacctctcagaaaa 215
              ||||||||||||||||||||
Sbjct: 134412 cagatgaacctctcagaaaa 134393
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>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
              sequence
          Length = 178022

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    ctcggcatcctccccgccat 168
              ||||||||||||||||||||
Sbjct: 161128 ctcggcatcctccccgccat 161147
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>dbj|AK157592.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830225E14 product:hypothetical protein,
            full insert sequence
          Length = 2485

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   agacagcagcagcaacccag 67
            ||||||||||||||||||||
Sbjct: 2152 agacagcagcagcaacccag 2133
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>emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chromosome 2, complete
              sequence
          Length = 201542

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     agacagcagcagcaacccag 67
              ||||||||||||||||||||
Sbjct: 158527 agacagcagcagcaacccag 158508
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>dbj|AB126869.1| Danio rerio INF-g gene for interferon gamma, complete cds
          Length = 2840

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  aattattttcttgcatttta 189
            ||||||||||||||||||||
Sbjct: 1798 aattattttcttgcatttta 1817
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 149      ctcggcatcctccccgccat 168
                ||||||||||||||||||||
Sbjct: 20898729 ctcggcatcctccccgccat 20898748
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       atctagacagcagcagcaac 63
                ||||||||||||||||||||
Sbjct: 20295259 atctagacagcagcagcaac 20295278
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>gb|AC092843.4| Homo sapiens BAC clone RP11-419O4 from 2, complete sequence
          Length = 83412

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   acagcagcagcaacccaggc 69
            ||||||||||||||||||||
Sbjct: 4618 acagcagcagcaacccaggc 4599
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>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006J22
          Length = 145271

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    atctagacagcagcagcaac 63
             ||||||||||||||||||||
Sbjct: 46064 atctagacagcagcagcaac 46083
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>emb|BX005382.6| Zebrafish DNA sequence from clone DKEY-242E14, complete sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   caattattttcttgcatttt 188
             ||||||||||||||||||||
Sbjct: 10944 caattattttcttgcatttt 10925
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>ref|XM_318953.2| Anopheles gambiae str. PEST ENSANGP00000015142 (ENSANGG00000012653),
            partial mRNA
          Length = 2459

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  tcggcatcctccccgccatc 169
            ||||||||||||||||||||
Sbjct: 2232 tcggcatcctccccgccatc 2251
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>dbj|AK070040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G13, full
           insert sequence
          Length = 2057

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 ctcggcatcctccccgccat 168
           ||||||||||||||||||||
Sbjct: 614 ctcggcatcctccccgccat 633
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>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4,
              complete sequence
          Length = 171708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aattattttcttgcatttta 189
              ||||||||||||||||||||
Sbjct: 110141 aattattttcttgcatttta 110160
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>dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, section 31/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    tcaattattttcttgcattt 187
              ||||||||||||||||||||
Sbjct: 175352 tcaattattttcttgcattt 175333
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>dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-42M17, complete
             sequence
          Length = 171863

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   tcaattattttcttgcattt 187
             ||||||||||||||||||||
Sbjct: 64271 tcaattattttcttgcattt 64252
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>dbj|AP004442.1| Cottus reinii mitochondrial DNA, complete genome
          Length = 16561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  gacaagggtggatgcaaggc 324
            ||||||||||||||||||||
Sbjct: 4523 gacaagggtggatgcaaggc 4504
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 149      ctcggcatcctccccgccat 168
                ||||||||||||||||||||
Sbjct: 20909993 ctcggcatcctccccgccat 20910012
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>emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on chromosome X, complete
             sequence
          Length = 131629

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   ttttcttgcattttagtgtg 194
             ||||||||||||||||||||
Sbjct: 85116 ttttcttgcattttagtgtg 85135
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>emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1769, complete sequence
          Length = 102619

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  tcaattattttcttgcattt 187
            ||||||||||||||||||||
Sbjct: 9390 tcaattattttcttgcattt 9409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,320,857
Number of Sequences: 3902068
Number of extensions: 4320857
Number of successful extensions: 84606
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84434
Number of HSP's gapped (non-prelim): 172
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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