ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_511263.1| PREDICTED: Pan troglodytes similar to hypotheti... 44 0.42
2gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, comp... 44 0.42
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.42
4gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 m... 44 0.42
5gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 44 0.42
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
8gb|AF283668.1|AF283668 Oryza sativa subsp. indica serine/threoni... 44 0.42
9dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
10dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
11gb|AY363665.1| Photoblepharon palpebratus mixed lineage leukemia... 44 0.42
12gb|DQ177325.1| Mus musculus strain BALB/c leucine rich repeat-co... 42 1.7
13gb|AC068662.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 1.7
14gb|AC124168.3| Mus musculus BAC clone RP23-143G9 from chromosome... 42 1.7
15emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on ch... 42 1.7
16emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chr... 42 1.7
17emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in... 42 1.7
18gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosom... 42 1.7
19gb|AC021063.16| Mus Musculus Chromosome 18 RP23-179K16, complet... 42 1.7
20gb|S84872.1| Solanum tuberosum type A phytochrome (c-phyA) mRNA,... 42 1.7
21dbj|AK046781.1| Mus musculus 10 days neonate medulla oblongata c... 42 1.7
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
23dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
24dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
25dbj|AK109495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
26dbj|AK100768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
27dbj|AK060154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
28gb|AC164074.5| Mus musculus chromosome 5, clone RP23-69E3, compl... 40 6.6
29ref|XM_468108.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
30gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete... 40 6.6
31ref|XM_960441.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
32gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosom... 40 6.6
33ref|XM_329092.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
34gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.6
35gb|AC166982.4| Mus musculus chromosome 18, clone RP24-377P23, co... 40 6.6
36gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, comp... 40 6.6
37gb|AF522197.1| Mus musculus scavenger receptor type F mRNA, comp... 40 6.6
38gb|AC121976.2| Mus musculus BAC clone RP24-286N17 from 8, comple... 40 6.6
39gb|BC060084.1| Mus musculus scavenger receptor class F, member 2... 40 6.6
40gb|BC059226.1| Mus musculus scavenger receptor class F, member 2... 40 6.6
41gb|AC121524.6| Mus musculus chromosome 18, clone RP24-342F19, co... 40 6.6
42gb|AC113004.13| Mus musculus chromosome 5, clone RP23-250M13, co... 40 6.6
43gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.6
44emb|AL136126.34| Human DNA sequence from clone RP1-89D4 on chrom... 40 6.6
45emb|AL603923.7| Mouse DNA sequence from clone RP23-180L15 on chr... 40 6.6
46emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.6
47gb|AY119037.1| Drosophila melanogaster LP06090 full insert cDNA 40 6.6
48gb|AY118767.1| Drosophila melanogaster GH10486 full insert cDNA 40 6.6
49gb|AC023686.4| Drosophila melanogaster X BAC RP98-30C1 (Roswell ... 40 6.6
50gb|AC010713.5| Drosophila melanogaster 3L BAC RP98-17E13 (Roswel... 40 6.6
51ref|NM_168554.1| Drosophila melanogaster CG32130-RD, transcript ... 40 6.6
52ref|NM_168553.1| Drosophila melanogaster CG32130-RB, transcript ... 40 6.6
53ref|NM_168552.1| Drosophila melanogaster CG32130-RC, transcript ... 40 6.6
54ref|NM_168551.1| Drosophila melanogaster CG32130-RA, transcript ... 40 6.6
55ref|NM_136501.1| Drosophila melanogaster CG11191-RA (CG11191), mRNA 40 6.6
56dbj|AK143208.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 6.6
57dbj|AK142378.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 40 6.6
58gb|AY059435.1| Drosophila melanogaster GH02003 full length cDNA 40 6.6
59dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
60dbj|AB024432.1| Mus musculus mRNA for NSR1, chromosome 16, compl... 40 6.6
61gb|AC073321.4| Homo sapiens BAC clone RP11-307A11 from 2, comple... 40 6.6
62ref|XM_237825.3| PREDICTED: Rattus norvegicus scavenger receptor... 40 6.6
63gb|AC079044.21| Mus musculus strain C57BL/6J chromosome 16 clone... 40 6.6
64gb|AC023701.4| Drosophila melanogaster X BAC RP98-29B16 (Roswell... 40 6.6
65dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
66dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
67gb|AC000096.17| Mus musculus Chromosome 16 BAC Clone bd3-6 Synte... 40 6.6
68dbj|AK120277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
69gb|AC003013.1|AC003013 Human PAC clone RP1-205E24 from Xq23, com... 40 6.6
70ref|XM_309091.2| Anopheles gambiae str. PEST ENSANGP00000003712 ... 40 6.6
71emb|AJ331660.1|HSA331660 Homo sapiens genomic sequence surroundi... 40 6.6
72gb|AF178977.1|AF178977 Cochliobolus heterostrophus mitogen-activ... 40 6.6
73dbj|AK060564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
74gb|U46856.2|APU46856 Anolis pulchellus vitellogenin mRNA, partia... 40 6.6
75gb|U46857.2|APU46857 Anolis pulchellus vitellogenin mRNA, partia... 40 6.6
76gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11... 40 6.6
77gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48... 40 6.6
78gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 ... 40 6.6
79emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chr... 40 6.6
80gb|AC005448.1|AC005448 Drosophila melanogaster, chromosome 2R, r... 40 6.6
81gb|AC122382.4| Mus musculus BAC clone RP23-479D11 from 13, compl... 40 6.6
82ref|NM_153790.1| Mus musculus scavenger receptor class F, member... 40 6.6
83emb|AL845277.11| Mouse DNA sequence from clone RP23-35J6 on chro... 40 6.6
84gb|AC087802.13| Mus musculus strain C57BL/6J chromosome 16 clone... 40 6.6
85gb|AC078895.34| Mus musculus strain C57BL/6J chromosome 16 clone... 40 6.6
86emb|AL627328.17| Mouse DNA sequence from clone RP23-299J22 on ch... 40 6.6
87emb|AL603709.14| Mouse DNA sequence from clone RP23-380H19 on ch... 40 6.6
88emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on ch... 40 6.6
89gb|M30933.1|EIMMAX E.tenella antigen LPMC61 mRNA, partial cds 40 6.6
90dbj|AB009568.1| Oryzias latipes mRNA for OlGRK-C, complete cds 40 6.6
91emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chr... 40 6.6 
>ref|XM_511263.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC454425), mRNA
          Length = 5721

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 59   agcagcagcagcagagggcacgggcc 84
            |||||||||||||||||||| |||||
Sbjct: 5229 agcagcagcagcagagggcaggggcc 5254
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>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence
          Length = 180370

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 51    aaagccagagcagcagcagcag 72
             ||||||||||||||||||||||
Sbjct: 91862 aaagccagagcagcagcagcag 91883
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 51      aaagccagagcagcagcagcag 72
               ||||||||||||||||||||||
Sbjct: 3643213 aaagccagagcagcagcagcag 3643234
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>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete
             sequence
          Length = 137003

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 55    ccagagcagcagcagcagaggg 76
             ||||||||||||||||||||||
Sbjct: 88444 ccagagcagcagcagcagaggg 88465
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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
              sequence
          Length = 160738

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     aaagccagagcagcagcagcag 72
              ||||||||||||||||||||||
Sbjct: 138164 aaagccagagcagcagcagcag 138143
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 60      gcagcagcagcagagggcacgg 81
               ||||||||||||||||||||||
Sbjct: 5581372 gcagcagcagcagagggcacgg 5581351



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 393      cttccttccttccgcctcgc 412
                ||||||||||||||||||||
Sbjct: 20069497 cttccttccttccgcctcgc 20069478
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 51      aaagccagagcagcagcagcag 72
               ||||||||||||||||||||||
Sbjct: 3643324 aaagccagagcagcagcagcag 3643345
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>gb|AF283668.1|AF283668 Oryza sativa subsp. indica serine/threonine protein phosphatase
          PP2A-5 catalytic subunit (PP2A) gene, complete cds
          Length = 5618

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 51 aaagccagagcagcagcagcag 72
          ||||||||||||||||||||||
Sbjct: 96 aaagccagagcagcagcagcag 75
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0081K20
          Length = 117287

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 60    gcagcagcagcagagggcacgg 81
             ||||||||||||||||||||||
Sbjct: 94457 gcagcagcagcagagggcacgg 94436
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>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0431A02
          Length = 165038

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 60    gcagcagcagcagagggcacgg 81
             ||||||||||||||||||||||
Sbjct: 43064 gcagcagcagcagagggcacgg 43043
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>gb|AY363665.1| Photoblepharon palpebratus mixed lineage leukemia-like protein
           (MLL) gene, exons 25, 26 and partial cds
          Length = 792

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 58  gagcagcagcagcagagggcac 79
           ||||||||||||||||||||||
Sbjct: 301 gagcagcagcagcagagggcac 322
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>gb|DQ177325.1| Mus musculus strain BALB/c leucine rich repeat-containing 4 protein
            (Lrrc4) mRNA, complete cds
          Length = 3615

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 56   cagagcagcagcagcagaggg 76
            |||||||||||||||||||||
Sbjct: 2941 cagagcagcagcagcagaggg 2961
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>gb|AC068662.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-251N15, complete
             sequence
          Length = 141783

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    cagagcagcagcagcagaggg 76
             |||||||||||||||||||||
Sbjct: 85457 cagagcagcagcagcagaggg 85437
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>gb|AC124168.3| Mus musculus BAC clone RP23-143G9 from chromosome 18, complete sequence
          Length = 203187

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    ccctaaggcttccttccttcc 405
              |||||||||||||||||||||
Sbjct: 150509 ccctaaggcttccttccttcc 150489
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>emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on chromosome Xq26.1-26.3,
              complete sequence
          Length = 162739

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 258    acactttcccttctcctctcc 278
              |||||||||||||||||||||
Sbjct: 113221 acactttcccttctcctctcc 113241
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>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a
              novel gene and a casein kinase II alpha 1 polypeptide
              (Csnk2a1) pseudogene, complete sequence
          Length = 134053

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     ccagagcagcagcagcagagg 75
              |||||||||||||||||||||
Sbjct: 110668 ccagagcagcagcagcagagg 110648
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>emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in linkage group 4 Contains
              the gene for a novel protein similar to vertebrate calcium
              channel voltage-dependent alpha 2/delta subunit 1
              (CACNA2D1) and a CpG island, complete sequence
          Length = 172228

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     aagccagagcagcagcagcag 72
              |||||||||||||||||||||
Sbjct: 148781 aagccagagcagcagcagcag 148761
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>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete sequence
          Length = 209583

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    ctttcctcttgcccctggcct 318
              |||||||||||||||||||||
Sbjct: 112301 ctttcctcttgcccctggcct 112321
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>gb|AC021063.16| Mus Musculus Chromosome 18  RP23-179K16, complete sequence
          Length = 202807

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 385   ccctaaggcttccttccttcc 405
             |||||||||||||||||||||
Sbjct: 20719 ccctaaggcttccttccttcc 20699
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>gb|S84872.1| Solanum tuberosum type A phytochrome (c-phyA) mRNA, complete cds
          Length = 3614

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 290  ctacctttctttcctcttgcccctg 314
            |||| ||||||||||||||||||||
Sbjct: 2235 ctacatttctttcctcttgcccctg 2211
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>dbj|AK046781.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830005D03
            product:leucine rich repeat containing 4, full insert
            sequence
          Length = 2833

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 56   cagagcagcagcagcagaggg 76
            |||||||||||||||||||||
Sbjct: 2148 cagagcagcagcagcagaggg 2168
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 393      cttccttccttccgcctcgcc 413
                |||||||||||||||||||||
Sbjct: 28963925 cttccttccttccgcctcgcc 28963945
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>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0047E11
          Length = 148109

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 393  cttccttccttccgcctcgcc 413
            |||||||||||||||||||||
Sbjct: 8283 cttccttccttccgcctcgcc 8303
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>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454A11
          Length = 152240

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 393   cttccttccttccgcctcgcc 413
             |||||||||||||||||||||
Sbjct: 76548 cttccttccttccgcctcgcc 76568
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>dbj|AK109495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B10, full
           insert sequence
          Length = 1395

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 393 cttccttccttccgcctcgcc 413
           |||||||||||||||||||||
Sbjct: 29  cttccttccttccgcctcgcc 49
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>dbj|AK100768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119M09, full
           insert sequence
          Length = 1373

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 393 cttccttccttccgcctcgcc 413
           |||||||||||||||||||||
Sbjct: 6   cttccttccttccgcctcgcc 26
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>dbj|AK060154.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F01, full
           insert sequence
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 393 cttccttccttccgcctcgcc 413
           |||||||||||||||||||||
Sbjct: 37  cttccttccttccgcctcgcc 57
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>gb|AC164074.5| Mus musculus chromosome 5, clone RP23-69E3, complete sequence
          Length = 210871

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tactacctttctttcctctt 307
             ||||||||||||||||||||
Sbjct: 46669 tactacctttctttcctctt 46650
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>ref|XM_468108.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 300

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  gcagcagcagcagagggcac 79
           ||||||||||||||||||||
Sbjct: 178 gcagcagcagcagagggcac 197
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>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence
          Length = 167107

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 24194 agccagagcagcagcagcag 24175
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>ref|XM_960441.1| Neurospora crassa OR74A hypothetical protein (NCU01903.1) partial
           mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 431 agccagagcagcagcagcag 450
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>gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosome 14, complete sequence
          Length = 210128

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    ctacactttcccttctcctc 275
              ||||||||||||||||||||
Sbjct: 128739 ctacactttcccttctcctc 128720
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>ref|XM_329092.1| Neurospora crassa OR74A hypothetical protein (NCU01903.1) partial
           mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 431 agccagagcagcagcagcag 450
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     ccgcgctcgccggatcgccg 163
               ||||||||||||||||||||
Sbjct: 2443345 ccgcgctcgccggatcgccg 2443364
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>gb|AC166982.4| Mus musculus chromosome 18, clone RP24-377P23, complete sequence
          Length = 154269

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     agccagagcagcagcagcagaggg 76
              ||||| ||||||||||||||||||
Sbjct: 114639 agccatagcagcagcagcagaggg 114616
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>gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, complete sequence
          Length = 239102

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   tactacctttctttcctctt 307
             ||||||||||||||||||||
Sbjct: 23187 tactacctttctttcctctt 23206
to top
>gb|AF522197.1| Mus musculus scavenger receptor type F mRNA, complete cds
          Length = 3310

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 181 agccagagcagcagcagcag 162
to top
>gb|AC121976.2| Mus musculus BAC clone RP24-286N17 from 8, complete sequence
          Length = 161146

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 48499 agccagagcagcagcagcag 48480
to top
>gb|BC060084.1| Mus musculus scavenger receptor class F, member 2, mRNA (cDNA clone
           IMAGE:6402375), partial cds
          Length = 3531

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 112 agccagagcagcagcagcag 93
to top
>gb|BC059226.1| Mus musculus scavenger receptor class F, member 2, mRNA (cDNA clone
           IMAGE:6402375), partial cds
          Length = 3493

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 112 agccagagcagcagcagcag 93
to top
>gb|AC121524.6| Mus musculus chromosome 18, clone RP24-342F19, complete sequence
          Length = 148255

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    agccagagcagcagcagcagaggg 76
             ||||| ||||||||||||||||||
Sbjct: 51551 agccatagcagcagcagcagaggg 51574
to top
>gb|AC113004.13| Mus musculus chromosome 5, clone RP23-250M13, complete sequence
          Length = 198820

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tactacctttctttcctctt 307
             ||||||||||||||||||||
Sbjct: 46669 tactacctttctttcctctt 46650
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     tttcctcttgcccctggcct 318
               ||||||||||||||||||||
Sbjct: 3001853 tttcctcttgcccctggcct 3001834
to top
>emb|AL136126.34| Human DNA sequence from clone RP1-89D4 on chromosome 11p12-14.1,
             complete sequence
          Length = 78947

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 19358 agccagagcagcagcagcag 19339
to top
>emb|AL603923.7| Mouse DNA sequence from clone RP23-180L15 on chromosome 11 Contains a
             plexin D1 (Plxnd1) pseudogene, the genes for olfactory
             receptors MOR135-9, -26 and -6 the gene for a novel
             olfactory receptor MOR135 family member, a ubiquitin (Ub)
             pseudogene, an olfactory receptor MOR135 pseudogene and
             the 3' end of the gene for a novel KRAB box domain
             containing protein, complete sequence
          Length = 141596

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 58747 agccagagcagcagcagcag 58766
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     ccgcgctcgccggatcgccg 163
               ||||||||||||||||||||
Sbjct: 1941213 ccgcgctcgccggatcgccg 1941194
to top
>gb|AY119037.1| Drosophila melanogaster LP06090 full insert cDNA
          Length = 1913

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gccagagcagcagcagcaga 73
           ||||||||||||||||||||
Sbjct: 750 gccagagcagcagcagcaga 769
to top
>gb|AY118767.1| Drosophila melanogaster GH10486 full insert cDNA
          Length = 1303

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 596 agccagagcagcagcagcag 615
to top
>gb|AC023686.4| Drosophila melanogaster X BAC RP98-30C1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170626

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 36327 agccagagcagcagcagcag 36346
to top
>gb|AC010713.5| Drosophila melanogaster 3L BAC RP98-17E13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 173714

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     gccagagcagcagcagcaga 73
              ||||||||||||||||||||
Sbjct: 110660 gccagagcagcagcagcaga 110679
to top
>ref|NM_168554.1| Drosophila melanogaster CG32130-RD, transcript variant D (CG32130),
           mRNA
          Length = 2497

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gccagagcagcagcagcaga 73
           ||||||||||||||||||||
Sbjct: 745 gccagagcagcagcagcaga 764
to top
>ref|NM_168553.1| Drosophila melanogaster CG32130-RB, transcript variant B (CG32130),
           mRNA
          Length = 2502

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gccagagcagcagcagcaga 73
           ||||||||||||||||||||
Sbjct: 750 gccagagcagcagcagcaga 769
to top
>ref|NM_168552.1| Drosophila melanogaster CG32130-RC, transcript variant C (CG32130),
           mRNA
          Length = 2576

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gccagagcagcagcagcaga 73
           ||||||||||||||||||||
Sbjct: 824 gccagagcagcagcagcaga 843
to top
>ref|NM_168551.1| Drosophila melanogaster CG32130-RA, transcript variant A (CG32130),
            mRNA
          Length = 3273

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   gccagagcagcagcagcaga 73
            ||||||||||||||||||||
Sbjct: 1521 gccagagcagcagcagcaga 1540
to top
>ref|NM_136501.1| Drosophila melanogaster CG11191-RA (CG11191), mRNA
          Length = 1300

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 614 agccagagcagcagcagcag 633
to top
>dbj|AK143208.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length
          enriched library, clone:E130308L09 product:scavenger
          receptor class F, member 2, full insert sequence
          Length = 3151

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 53 agccagagcagcagcagcag 72
          ||||||||||||||||||||
Sbjct: 22 agccagagcagcagcagcag 3
to top
>dbj|AK142378.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:D430027G05 product:scavenger receptor
           class F, member 2, full insert sequence
          Length = 3526

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 148 agccagagcagcagcagcag 129
to top
>gb|AY059435.1| Drosophila melanogaster GH02003 full length cDNA
          Length = 3286

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   gccagagcagcagcagcaga 73
            ||||||||||||||||||||
Sbjct: 1521 gccagagcagcagcagcaga 1540
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       gcagcagcagcagagggcac 79
                ||||||||||||||||||||
Sbjct: 33112262 gcagcagcagcagagggcac 33112281
to top
>dbj|AB024432.1| Mus musculus mRNA for NSR1, chromosome 16, complete cds
          Length = 3274

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 147 agccagagcagcagcagcag 128
to top
>gb|AC073321.4| Homo sapiens BAC clone RP11-307A11 from 2, complete sequence
          Length = 162208

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ctttctttcctcttgcccct 313
              ||||||||||||||||||||
Sbjct: 124166 ctttctttcctcttgcccct 124147
to top
>ref|XM_237825.3| PREDICTED: Rattus norvegicus scavenger receptor class F, member 2
           (predicted) (Scarf2_predicted), mRNA
          Length = 3316

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 180 agccagagcagcagcagcag 161
to top
>gb|AC079044.21| Mus musculus strain C57BL/6J chromosome 16 clone rp23-51l7, complete
              sequence
          Length = 228349

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     agccagagcagcagcagcag 72
              ||||||||||||||||||||
Sbjct: 193041 agccagagcagcagcagcag 193022
to top
>gb|AC023701.4| Drosophila melanogaster X BAC RP98-29B16 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 198245

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 89682 agccagagcagcagcagcag 89663
to top
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1657_A07
          Length = 125217

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   cttccttccttccgcctcgc 412
             ||||||||||||||||||||
Sbjct: 34100 cttccttccttccgcctcgc 34081
to top
>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gcagcagcagcagagggcac 79
             ||||||||||||||||||||
Sbjct: 27922 gcagcagcagcagagggcac 27941
to top
>gb|AC000096.17| Mus musculus Chromosome 16 BAC Clone bd3-6 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 127343

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 54968 agccagagcagcagcagcag 54949
to top
>dbj|AK120277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049C19, full
           insert sequence
          Length = 4229

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 393 cttccttccttccgcctcgc 412
           ||||||||||||||||||||
Sbjct: 20  cttccttccttccgcctcgc 39
to top
>gb|AC003013.1|AC003013 Human PAC clone RP1-205E24 from Xq23, complete sequence
          Length = 173452

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    agctacactttcccttctcc 273
              ||||||||||||||||||||
Sbjct: 168205 agctacactttcccttctcc 168186
to top
>ref|XM_309091.2| Anopheles gambiae str. PEST ENSANGP00000003712 (ENSANGG00000002970),
            partial mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  cctcgtcgctgcacagccgc 447
            ||||||||||||||||||||
Sbjct: 1124 cctcgtcgctgcacagccgc 1143
to top
>emb|AJ331660.1|HSA331660 Homo sapiens genomic sequence surrounding NotI site, clone
          NR3-AN6R
          Length = 698

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 53 agccagagcagcagcagcag 72
          ||||||||||||||||||||
Sbjct: 88 agccagagcagcagcagcag 69
to top
>gb|AF178977.1|AF178977 Cochliobolus heterostrophus mitogen-activated protein kinase (CHK1)
           gene, complete cds
          Length = 2160

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 285 agccagagcagcagcagcag 266
to top
>dbj|AK060564.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-G11, full
           insert sequence
          Length = 1427

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 261 ctttcccttctcctctccaccatc 284
           ||||||||||||||| ||||||||
Sbjct: 752 ctttcccttctcctcaccaccatc 729
to top
>gb|U46856.2|APU46856 Anolis pulchellus vitellogenin mRNA, partial cds
          Length = 2320

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 670 agccagagcagcagcagcag 689
to top
>gb|U46857.2|APU46857 Anolis pulchellus vitellogenin mRNA, partial cds
          Length = 2133

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 484 agccagagcagcagcagcag 503
to top
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete
              sequence
          Length = 254177

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     agccagagcagcagcagcag 72
              ||||||||||||||||||||
Sbjct: 212886 agccagagcagcagcagcag 212867
to top
>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete
             sequence
          Length = 282116

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gccagagcagcagcagcaga 73
             ||||||||||||||||||||
Sbjct: 32618 gccagagcagcagcagcaga 32637
to top
>gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 of 74 of the complete
              sequence
          Length = 319328

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     agccagagcagcagcagcag 72
              ||||||||||||||||||||
Sbjct: 271915 agccagagcagcagcagcag 271934
to top
>emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chromosome 2, complete
             sequence
          Length = 215139

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 26407 agccagagcagcagcagcag 26426
to top
>gb|AC005448.1|AC005448 Drosophila melanogaster, chromosome 2R, region 44A2-44A3, P1 clone
             DS06886, complete sequence
          Length = 86889

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 76060 agccagagcagcagcagcag 76041
to top
>gb|AC122382.4| Mus musculus BAC clone RP23-479D11 from 13, complete sequence
          Length = 190429

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gaaacaaatcaaatccacga 21
             ||||||||||||||||||||
Sbjct: 35314 gaaacaaatcaaatccacga 35295
to top
>ref|NM_153790.1| Mus musculus scavenger receptor class F, member 2 (Scarf2), mRNA
          Length = 3310

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 181 agccagagcagcagcagcag 162
to top
>emb|AL845277.11| Mouse DNA sequence from clone RP23-35J6 on chromosome 2, complete
              sequence
          Length = 225087

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     agagcagcagcagcagaggg 76
              ||||||||||||||||||||
Sbjct: 143183 agagcagcagcagcagaggg 143202
to top
>gb|AC087802.13| Mus musculus strain C57BL/6J chromosome 16 clone rp23-472f15, complete
              sequence
          Length = 187260

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     agccagagcagcagcagcag 72
              ||||||||||||||||||||
Sbjct: 179127 agccagagcagcagcagcag 179108
to top
>gb|AC078895.34| Mus musculus strain C57BL/6J chromosome 16 clone rp23-372h6, complete
              sequence
          Length = 211256

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     agccagagcagcagcagcag 72
              ||||||||||||||||||||
Sbjct: 189563 agccagagcagcagcagcag 189582
to top
>emb|AL627328.17| Mouse DNA sequence from clone RP23-299J22 on chromosome 4, complete
              sequence
          Length = 229494

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     agcagcagcagcagagggca 78
              ||||||||||||||||||||
Sbjct: 137106 agcagcagcagcagagggca 137125
to top
>emb|AL603709.14| Mouse DNA sequence from clone RP23-380H19 on chromosome 11, complete
              sequence
          Length = 156490

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     ctctcccaaccgtagggcaaagcc 56
              |||||||||||| |||||||||||
Sbjct: 122737 ctctcccaaccgcagggcaaagcc 122714
to top
>emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on chromosome 13, complete
             sequence
          Length = 221647

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    agccagagcagcagcagcag 72
             ||||||||||||||||||||
Sbjct: 66038 agccagagcagcagcagcag 66057
to top
>gb|M30933.1|EIMMAX E.tenella antigen LPMC61 mRNA, partial cds
          Length = 767

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  agccagagcagcagcagcag 72
           ||||||||||||||||||||
Sbjct: 467 agccagagcagcagcagcag 486
to top
>dbj|AB009568.1| Oryzias latipes mRNA for OlGRK-C, complete cds
          Length = 2954

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cagagcagcagcagcagagg 75
            ||||||||||||||||||||
Sbjct: 2473 cagagcagcagcagcagagg 2454
to top
>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete
             sequence
          Length = 95219

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 178   ggggctgagttcccgcccgtgctc 201
             ||||||||||||| ||||||||||
Sbjct: 60064 ggggctgagttccagcccgtgctc 60087


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,344,033
Number of Sequences: 3902068
Number of extensions: 5344033
Number of successful extensions: 276349
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 274710
Number of HSP's gapped (non-prelim): 1639
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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