ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55e02 |
|---|---|
| Clone Library Name | barley_pub |
>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 237 bits (605), Expect = 1e-62 Identities = 118/127 (92%), Positives = 118/127 (92%) Frame = +1 Query: 103 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEE 282 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTP KNGYGDYLIEEEE Sbjct: 1 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASAAAGAKNGYGDYLIEEEE 60 Query: 283 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 462 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP Sbjct: 61 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 120 Query: 463 CTYSKGT 483 CTYSKGT Sbjct: 121 CTYSKGT 127
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 179 bits (453), Expect = 4e-45 Identities = 89/125 (71%), Positives = 100/125 (80%), Gaps = 1/125 (0%) Frame = +1 Query: 106 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXX-XXXXKNGYGDYLIEEEE 282 AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++ KNGY DYLIEEEE Sbjct: 3 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEE 62 Query: 283 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 462 G+NDHNVVVKCAEIQ AISEGATSFLFT Y+YVG+FMV FA +IFLFLGS+EGFST Q Sbjct: 63 GINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQA 122 Query: 463 CTYSK 477 C+Y K Sbjct: 123 CSYDK 127
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 174 bits (442), Expect = 8e-44 Identities = 84/128 (65%), Positives = 102/128 (79%), Gaps = 4/128 (3%) Frame = +1 Query: 100 AMAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXX----KNGYGDYL 267 A A+L EL TEIL+P+C VIGI F++ QW++VS+VK+T KNGYGDYL Sbjct: 3 APALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGDYL 62 Query: 268 IEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFS 447 IEEEEG+ND +VV KCAEIQTAISEGATSFLFT Y+YVG+FM+ FAA+IF+FLGS+EGFS Sbjct: 63 IEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFS 122 Query: 448 TKGQPCTY 471 T +PCTY Sbjct: 123 TDNKPCTY 130
>HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 37.0 bits (84), Expect = 0.027 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 310 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGFS 447 K EI +AISEGA +FL Y+ + +F+ A +I L L + EGF+ Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFN 89
>HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 37.0 bits (84), Expect = 0.027 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 310 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGFS 447 K EI +AISEGA +FL Y+ + +F+ A +I L L + EGF+ Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFN 89
>HPPA2_RHOPA (Q8KY01) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 725 Score = 33.1 bits (74), Expect = 0.40 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSI 435 EI AI +GA ++L Y+ + + V A +IF FLG + Sbjct: 40 EIAGAIQQGAAAYLARQYKTIAIVGAVLAILIFFFLGGL 78
>HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 673 Score = 32.3 bits (72), Expect = 0.67 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429 EI I +GA +FL T Y+Y+ F+V+ I+ +F+G Sbjct: 38 EIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVG 74
>HPPA_BRAJA (Q89K83) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 706 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429 EI A+ EGA ++L Y +G+ +V ++ FLG Sbjct: 37 EIAAAVREGAQAYLRRQYTTIGIVGIVIFVLLVYFLG 73
>PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-containing| protein 1) (Beta-interferon gene positive-regulatory domain I-binding factor) (BLIMP-1) (Positive regulatory domain I-binding factor 1) (PRDI-binding factor 1) (PRDI-BF1) Length = 789 Score = 29.3 bits (64), Expect = 5.7 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -2 Query: 458 WPFVLNPSIDPRKRKIIAAKTTMNIPTYWYMVKRNDVAPSEMAVW 324 W +NP+ PR++ + A + MNI Y+Y +K A E+ VW Sbjct: 122 WMRYVNPAHSPREQNLAACQNGMNI--YFYTIKPIP-ANQELLVW 163
>HPPA_RHORT (O68460) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 702 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGF 444 EI A+ EGA++FL Y+ + + V I+ LG GF Sbjct: 38 EISGAVQEGASAFLNRQYKTIAVVGAVVFVILTALLGISVGF 79
>HPPA1_RHOPA (P60363) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 706 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429 EI A+ EGA ++L Y + + VV A++ FLG Sbjct: 37 EIAGAVREGAQAYLKRQYMTIAIVGVVIFALLAYFLG 73
>HPPA1_METAC (Q8TJA9) Pyrophosphate-energized proton pump 1 (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase 1) (H+-PPase 1) (Membrane-bound proton-translocating pyrophosphatase 1) Length = 676 Score = 28.5 bits (62), Expect = 9.7 Identities = 25/97 (25%), Positives = 39/97 (40%) Frame = +1 Query: 136 LIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEEGLNDHNVVVKC 315 L P+C +IG++FA + V G G+ LI+ Sbjct: 7 LAPICALIGLIFAGISYKNVQ---------------NEGAGNDLIK-------------- 37 Query: 316 AEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFL 426 +I +I GA +L Y+ + +F+V A II L L Sbjct: 38 -KITASIHGGAMVYLNRQYRAIAVFVVFLAIIIALIL 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,355,154 Number of Sequences: 219361 Number of extensions: 550947 Number of successful extensions: 1971 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1918 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1965 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
