ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55e01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 357 bits (180), Expect = 2e-95 Identities = 273/304 (89%) Strand = Plus / Plus Query: 140 gaggccatggaggacgtgtgcgaggggaaggacttctccttcccggcggaggaggagcgg 199 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 25949447 gaggccatggaggacgtctgcgaggggaaggacttctccttccccgcggaggaggagcgc 25949506 Query: 200 gttctccagctgtgggccaagctggacgcgttccacgagcagctgcggcgcacggagggc 259 || ||| |||||||| | |||| ||||| |||||||||||||| || |||||| ||||| Sbjct: 25949507 gtgctcaagctgtggtcggagctcgacgccttccacgagcagctccgccgcacgaagggc 25949566 Query: 260 ggcgaggagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggc 319 |||||||||||||||||||||||||| || || ||||| ||||||||||| ||||| ||| Sbjct: 25949567 ggcgaggagttcatcttctacgacgggcccccgttcgccaccggcctcccgcactatggc 25949626 Query: 320 cacatcctcgccggcaccatcaaggacgtggtgacccggcaccagtcgatgcgcgggcgc 379 ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 25949627 cacatcctcgcgggcacaatcaaggacgtggtcacccgccaccagtcgatgcgcggccgc 25949686 Query: 380 cacgtgatgcggcgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgac 439 ||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 25949687 cacgtctcccgccgcttcgggtgggactgccatggcctccccgtcgagttcgagatcgac 25949746 Query: 440 aagc 443 |||| Sbjct: 25949747 aagc 25949750 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 14425123 cccttcttcccctcttcctctctc 14425146
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 357 bits (180), Expect = 2e-95 Identities = 273/304 (89%) Strand = Plus / Plus Query: 140 gaggccatggaggacgtgtgcgaggggaaggacttctccttcccggcggaggaggagcgg 199 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 104545 gaggccatggaggacgtctgcgaggggaaggacttctccttccccgcggaggaggagcgc 104604 Query: 200 gttctccagctgtgggccaagctggacgcgttccacgagcagctgcggcgcacggagggc 259 || ||| |||||||| | |||| ||||| |||||||||||||| || |||||| ||||| Sbjct: 104605 gtgctcaagctgtggtcggagctcgacgccttccacgagcagctccgccgcacgaagggc 104664 Query: 260 ggcgaggagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggc 319 |||||||||||||||||||||||||| || || ||||| ||||||||||| ||||| ||| Sbjct: 104665 ggcgaggagttcatcttctacgacgggcccccgttcgccaccggcctcccgcactatggc 104724 Query: 320 cacatcctcgccggcaccatcaaggacgtggtgacccggcaccagtcgatgcgcgggcgc 379 ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 104725 cacatcctcgcgggcacaatcaaggacgtggtcacccgccaccagtcgatgcgcggccgc 104784 Query: 380 cacgtgatgcggcgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgac 439 ||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 104785 cacgtctcccgccgcttcgggtgggactgccatggcctccccgtcgagttcgagatcgac 104844 Query: 440 aagc 443 |||| Sbjct: 104845 aagc 104848
>dbj|AK101482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041F01, full insert sequence Length = 4632 Score = 357 bits (180), Expect = 2e-95 Identities = 273/304 (89%) Strand = Plus / Plus Query: 140 gaggccatggaggacgtgtgcgaggggaaggacttctccttcccggcggaggaggagcgg 199 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 213 gaggccatggaggacgtctgcgaggggaaggacttctccttccccgcggaggaggagcgc 272 Query: 200 gttctccagctgtgggccaagctggacgcgttccacgagcagctgcggcgcacggagggc 259 || ||| |||||||| | |||| ||||| |||||||||||||| || |||||| ||||| Sbjct: 273 gtgctcaagctgtggtcggagctcgacgccttccacgagcagctccgccgcacgaagggc 332 Query: 260 ggcgaggagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggc 319 |||||||||||||||||||||||||| || || ||||| ||||||||||| ||||| ||| Sbjct: 333 ggcgaggagttcatcttctacgacgggcccccgttcgccaccggcctcccgcactatggc 392 Query: 320 cacatcctcgccggcaccatcaaggacgtggtgacccggcaccagtcgatgcgcgggcgc 379 ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 393 cacatcctcgcgggcacaatcaaggacgtggtcacccgccaccagtcgatgcgcggccgc 452 Query: 380 cacgtgatgcggcgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgac 439 ||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 453 cacgtctcccgccgcttcgggtgggactgccatggcctccccgtcgagttcgagatcgac 512 Query: 440 aagc 443 |||| Sbjct: 513 aagc 516
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 242 bits (122), Expect = 8e-61 Identities = 242/282 (85%) Strand = Plus / Minus Query: 146 atggaggacgtgtgcgaggggaaggacttctccttcccggcggaggaggagcgggttctc 205 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4679922 atggacgaggtgtgcgaggggaaggacttctccttcccggcggaggaggagcgggtcctc 4679863 Query: 206 cagctgtgggccaagctggacgcgttccacgagcagctgcggcgcacggagggcggcgag 265 | || |||| |||| ||||| |||||||||||||| || ||||||| |||||||||| Sbjct: 4679862 cgcctctgggaggagctcgacgccttccacgagcagctccgccgcacggcgggcggcgag 4679803 Query: 266 gagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatc 325 |||||| ||||||||||||| || |||||||| || |||||||| |||||||||||| || Sbjct: 4679802 gagttcgtcttctacgacgggccccccttcgccacgggcctcccgcactacggccacctc 4679743 Query: 326 ctcgccggcaccatcaaggacgtggtgacccggcaccagtcgatgcgcgggcgccacgtg 385 ||||| |||| ||||||||||| || |||| ||||| | |||||||| |||||||| Sbjct: 4679742 ctcgcgggcagcatcaaggacgccgtcgcccgccaccacgccatgcgcggccgccacgtc 4679683 Query: 386 atgcggcgcttcgggtgggactgccacggcctgcccgtcgag 427 || |||||||| ||||||||||||||| | ||||||||| Sbjct: 4679682 gcccgccgcttcggctgggactgccacggcgtccccgtcgag 4679641 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 18923746 cccttcttcccctcttcctctctc 18923723 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 17391273 cccttcttcccctcttcctctctc 17391250 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 |||||||||| ||||||||||||| Sbjct: 8060371 cccttcttcctctctccctctctc 8060394
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 242 bits (122), Expect = 8e-61 Identities = 242/282 (85%) Strand = Plus / Minus Query: 146 atggaggacgtgtgcgaggggaaggacttctccttcccggcggaggaggagcgggttctc 205 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 51994 atggacgaggtgtgcgaggggaaggacttctccttcccggcggaggaggagcgggtcctc 51935 Query: 206 cagctgtgggccaagctggacgcgttccacgagcagctgcggcgcacggagggcggcgag 265 | || |||| |||| ||||| |||||||||||||| || ||||||| |||||||||| Sbjct: 51934 cgcctctgggaggagctcgacgccttccacgagcagctccgccgcacggcgggcggcgag 51875 Query: 266 gagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatc 325 |||||| ||||||||||||| || |||||||| || |||||||| |||||||||||| || Sbjct: 51874 gagttcgtcttctacgacgggccccccttcgccacgggcctcccgcactacggccacctc 51815 Query: 326 ctcgccggcaccatcaaggacgtggtgacccggcaccagtcgatgcgcgggcgccacgtg 385 ||||| |||| ||||||||||| || |||| ||||| | |||||||| |||||||| Sbjct: 51814 ctcgcgggcagcatcaaggacgccgtcgcccgccaccacgccatgcgcggccgccacgtc 51755 Query: 386 atgcggcgcttcgggtgggactgccacggcctgcccgtcgag 427 || |||||||| ||||||||||||||| | ||||||||| Sbjct: 51754 gcccgccgcttcggctgggactgccacggcgtccccgtcgag 51713
>gb|AF326935.2|AF326935 Leishmania donovani isoleucine tRNA synthetase (IleRS) gene, complete cds Length = 3690 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 268 gttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcct 327 ||||| ||||||||||||||| || |||||||| ||||| || ||||||||||||||| | Sbjct: 452 gttcagcttctacgacggcccaccgttcgcgactggcctgccgcactacggccacatctt 511 Query: 328 cgccggcaccatcaaggacgtggt 351 || ||||||||||||||| |||| Sbjct: 512 ggctggcaccatcaaggacatggt 535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 379 ccacgtgatgcggcgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcga 438 |||||| || || |||||||| |||||||||||||| ||||| || |||| ||| ||||| Sbjct: 563 ccacgtcatccgtcgcttcggctgggactgccacggtctgccggtggagtacgaaatcga 622 Query: 439 caag 442 |||| Sbjct: 623 caag 626
>ref|XM_322832.1| Neurospora crassa OR74A hypothetical protein (NCU03575.1) partial mRNA Length = 3240 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 274 cttctacgacggcccgcccttcgcgaccggcctcccccactacggccac 322 ||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 108 cttctacgatggcccgcccttcgccaccggcctcccccactacggccac 156 Score = 46.1 bits (23), Expect = 0.097 Identities = 44/51 (86%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaag 442 |||||||| |||||| |||||||||||| ||||| ||||||||||||| Sbjct: 226 cgcttcggctgggacacgcacggcctgcccatcgagcacgagatcgacaag 276
>ref|XM_950921.1| Neurospora crassa OR74A hypothetical protein (NCU03575.1) partial mRNA Length = 3240 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 274 cttctacgacggcccgcccttcgcgaccggcctcccccactacggccac 322 ||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 108 cttctacgatggcccgcccttcgccaccggcctcccccactacggccac 156 Score = 46.1 bits (23), Expect = 0.097 Identities = 44/51 (86%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaag 442 |||||||| |||||| |||||||||||| ||||| ||||||||||||| Sbjct: 226 cgcttcggctgggacacgcacggcctgcccatcgagcacgagatcgacaag 276
>emb|BX284746.1|NCB23I4 Neurospora crassa DNA linkage group II BAC contig B23I4 Length = 71047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 274 cttctacgacggcccgcccttcgcgaccggcctcccccactacggccac 322 ||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 34676 cttctacgatggcccgcccttcgccaccggcctcccccactacggccac 34724 Score = 46.1 bits (23), Expect = 0.097 Identities = 44/51 (86%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaag 442 |||||||| |||||| |||||||||||| ||||| ||||||||||||| Sbjct: 34794 cgcttcggctgggacacgcacggcctgcccatcgagcacgagatcgacaag 34844
>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence Length = 138838 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 271 catcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgc 330 ||||||||||||||| || |||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 59018 catcttctacgacggtccacccttcgccaccggtctccctcactacggccacatccttgc 59077 Query: 331 cggcaccatcaa 342 ||| || ||||| Sbjct: 59078 cggtactatcaa 59089
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 273 tcttctacgacggcccgcccttcgcgaccggcctcccccactacggccac 322 ||||||||||||||||||||||||| | |||||| || |||||||||||| Sbjct: 804892 tcttctacgacggcccgcccttcgccaacggcctgccgcactacggccac 804941 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 2118881 tcgagttcgagatcgacaagc 2118861
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||||||||| |||||||| ||||| || || ||||||||||| || || ||||| Sbjct: 224545 ttctacgacggcccccccttcgccaccgggcttccgcactacggccatattcttgccgga 224486 Query: 335 accatcaagg 344 |||||||||| Sbjct: 224485 accatcaagg 224476 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaag 442 ||||||||||||||||||||||| |||| |||||||| || || |||||| Sbjct: 223814 cgcttcgggtgggactgccacgggttgcctgtcgagtttgaaattgacaag 223764
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagct 444 |||||||| ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 32572 cgcttcggctgggattgccacggactgcccgtggagttcgagattgacaagct 32624 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||| || |||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 32455 ttctacgatggaccgccctttgcaaccgggctgccccactacggacacattcttgctggc 32514 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 32515 accatcaaggac 32526
>gb|AY118538.1| Drosophila melanogaster LD27166 full insert cDNA Length = 3908 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagct 444 |||||||| ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 390 cgcttcggctgggattgccacggactgcccgtggagttcgagattgacaagct 442 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||| || |||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 273 ttctacgatggaccgccctttgcaaccgggctgccccactacggacacattcttgctggc 332 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 333 accatcaaggac 344
>ref|NM_176387.1| Drosophila melanogaster Isoleucyl-tRNA synthetase CG11471-RD, transcript variant D (Aats-ile), mRNA Length = 3848 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagct 444 |||||||| ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 349 cgcttcggctgggattgccacggactgcccgtggagttcgagattgacaagct 401 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||| || |||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 232 ttctacgatggaccgccctttgcaaccgggctgccccactacggacacattcttgctggc 291 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 292 accatcaaggac 303
>ref|NM_168952.2| Drosophila melanogaster Isoleucyl-tRNA synthetase CG11471-RA, transcript variant A (Aats-ile), mRNA Length = 3910 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagct 444 |||||||| ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 403 cgcttcggctgggattgccacggactgcccgtggagttcgagattgacaagct 455 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||| || |||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 286 ttctacgatggaccgccctttgcaaccgggctgccccactacggacacattcttgctggc 345 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 346 accatcaaggac 357
>ref|NM_080101.3| Drosophila melanogaster Isoleucyl-tRNA synthetase CG11471-RC, transcript variant C (Aats-ile), mRNA Length = 3823 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagct 444 |||||||| ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 324 cgcttcggctgggattgccacggactgcccgtggagttcgagattgacaagct 376 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||| || |||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 207 ttctacgatggaccgccctttgcaaccgggctgccccactacggacacattcttgctggc 266 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 267 accatcaaggac 278
>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete sequence Length = 365612 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagct 444 |||||||| ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 165464 cgcttcggctgggattgccacggactgcccgtggagttcgagattgacaagct 165516 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 |||||||| || |||||||| || ||||| || ||||||||||| ||||| || || ||| Sbjct: 165347 ttctacgatggaccgccctttgcaaccgggctgccccactacggacacattcttgctggc 165406 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 165407 accatcaaggac 165418
>ref|XM_756214.1| Ustilago maydis 521 hypothetical protein (UM05160.1) partial mRNA Length = 3264 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 392 cgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaagc 443 |||||||| ||||| ||||||||||| ||||||||| |||||||||||||| Sbjct: 277 cgcttcggttgggattgccacggccttcccgtcgagcacgagatcgacaagc 328 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 269 ttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggcca 321 |||| ||||||||||||||| |||||||| ||||| || || || |||||||| Sbjct: 154 ttcagcttctacgacggccctcccttcgccaccggtctgccgcattacggcca 206
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctc 328 ||||||||||||||||| ||||||| ||| || || |||||||||||| ||||| Sbjct: 55565 ttctacgacggcccgccgttcgcgaacgggctgccgcactacggccacctcctc 55618
>gb|AY993941.1| Microbacterium arborescens strain SE 14 cosmid MAS10D5, complete sequence Length = 33203 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 273 tcttctacgacggcccgcccttcgcgaccggcctcccccactacggccac 322 ||||||||||||||||||||||||| | ||| || || |||||||||||| Sbjct: 7191 tcttctacgacggcccgcccttcgccaacggtctgccgcactacggccac 7142
>gb|BC056826.1| Danio rerio zgc:63790, mRNA (cDNA clone MGC:63790 IMAGE:2644687), complete cds Length = 3972 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 379 ccacgtgatgcggcgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcga 438 ||||||| |||||||||||| ||||||||||| |||||||| || |||| |||||||| Sbjct: 277 ccacgtggagcggcgcttcggctgggactgccatggcctgccggtggagtatgagatcga 336 Score = 40.1 bits (20), Expect = 6.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 ||||||||||| ||||||||||| || || || || ||||| || || || || || || Sbjct: 173 ttctacgacgggccgcccttcgccacaggtctgcctcactatggtcatattctggcggga 232 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 233 accatcaaggac 244
>ref|NM_199896.1| Danio rerio zgc:63790 (zgc:63790), mRNA Length = 3972 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 379 ccacgtgatgcggcgcttcgggtgggactgccacggcctgcccgtcgagttcgagatcga 438 ||||||| |||||||||||| ||||||||||| |||||||| || |||| |||||||| Sbjct: 277 ccacgtggagcggcgcttcggctgggactgccatggcctgccggtggagtatgagatcga 336 Score = 40.1 bits (20), Expect = 6.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 ||||||||||| ||||||||||| || || || || ||||| || || || || || || Sbjct: 173 ttctacgacgggccgcccttcgccacaggtctgcctcactatggtcatattctggcggga 232 Query: 335 accatcaaggac 346 |||||||||||| Sbjct: 233 accatcaaggac 244
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 397 cgggtgggactgccacggcctgcccgt 423 ||||||||||||||||||||||||||| Sbjct: 1308151 cgggtgggactgccacggcctgcccgt 1308125
>gb|AC122873.5| Mus musculus BAC clone RP23-110K10 from 8, complete sequence Length = 199474 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctccc 35 |||||||||||||||||||||||||| Sbjct: 90240 cccttcttcccctctccctctctccc 90265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 90266 tcttcccctctccctctctc 90285
>gb|AC127258.4| Mus musculus BAC clone RP24-302G16 from 8, complete sequence Length = 163028 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctccc 35 |||||||||||||||||||||||||| Sbjct: 2249 cccttcttcccctctccctctctccc 2224 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 2223 tcttcccctctccctctctc 2204
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 265 ggagttcatcttctacgacggcccgcccttcgc 297 ||||||| ||||||||||||||||||| ||||| Sbjct: 1932268 ggagttcgtcttctacgacggcccgccgttcgc 1932300 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 cccgtcgagttcgagatcgac 439 ||||||||||||||||||||| Sbjct: 5949916 cccgtcgagttcgagatcgac 5949896
>ref|XM_320939.2| Anopheles gambiae str. PEST ENSANGP00000017588 (ENSANGG00000015099), partial mRNA Length = 3838 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 308 ccccactacggccacatcctcgccggcac 336 ||||||||||| ||||||||||||||||| Sbjct: 380 ccccactacggacacatcctcgccggcac 408
>ref|XM_390898.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG10722.1) partial mRNA Length = 3243 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacgg 318 ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 109 ttctacgacggacctcctttcgcgaccggcctccctcattacgg 152
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcccgtcgagt 428 ||||||||||||||||||||| |||||| Sbjct: 892849 tgggactgccacggcctgcccatcgagt 892876 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 cggccacatcctcgccggcaccatcaag 343 |||||||||||| ||||||| ||||||| Sbjct: 3093152 cggccacatcctggccggcaacatcaag 3093125
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcccgtcgagt 428 ||||||||||||||||||||| |||||| Sbjct: 3480765 tgggactgccacggcctgcccatcgagt 3480738
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 cgcttcgggtgggactgccacggcctgcccgt 423 ||||||||||||||||||||||| || ||||| Sbjct: 2701765 cgcttcgggtgggactgccacggtcttcccgt 2701734
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Minus Query: 255 agggcggcgaggagttcatcttctacgacggcccgccct 293 ||||| ||||| |||||||| || ||||||||||||||| Sbjct: 2483770 agggccgcgagcagttcatcctccacgacggcccgccct 2483732 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 2483624 tgggactgccacggcctgcc 2483605
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcccgtcgag 427 ||||||||||||||||||||| ||||| Sbjct: 3442265 tgggactgccacggcctgcccatcgag 3442239
>ref|XM_723545.1| Plasmodium yoelii yoelii str. 17XNL virulence factor MVIN (PY07692) partial mRNA Length = 3592 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcccgtcgag 427 ||||||||||||||||||||| ||||| Sbjct: 2317 tgggactgccacggcctgcccatcgag 2343
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcccgtcgag 427 |||||||||||||| |||||||||||| Sbjct: 1717677 tgggactgccacgggctgcccgtcgag 1717651
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcccgtcgag 427 ||||||||||||||||||||| ||||| Sbjct: 2442333 tgggactgccacggcctgcccatcgag 2442359
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcccgtcgag 427 ||||||||||||||||||||| ||||| Sbjct: 15064 tgggactgccacggcctgcccatcgag 15090
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 398 gggtgggactgccacggcctgcccgtcgag 427 |||||||||||||||||||| ||| ||||| Sbjct: 391144 gggtgggactgccacggcctccccatcgag 391173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 gggcgccacgtgatgcggcgc 394 ||||||||||||||||||||| Sbjct: 3604297 gggcgccacgtgatgcggcgc 3604277
>ref|XM_450634.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1815 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 acccctaaacccttcttcccct 22 |||||||||||||||||||||| Sbjct: 118 acccctaaacccttcttcccct 139
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 125632 tcttcccctctccctctctccc 125653
>gb|AC117723.8| Mus musculus chromosome 1, clone RP24-232C21, complete sequence Length = 213190 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctccc 35 ||||||||| |||||||||||||||| Sbjct: 126375 cccttcttctcctctccctctctccc 126400
>gb|AC133968.3| Mus musculus BAC clone RP23-60J24 from chromosome 18, complete sequence Length = 206569 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 153344 tcttcccctctccctctctccc 153323
>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete sequence Length = 180727 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 39835 tcttcccctctccctctctccc 39814
>gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome 18, complete sequence Length = 173614 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctccc 35 ||||||| |||||||||||||||||| Sbjct: 69126 cccttctccccctctccctctctccc 69101
>gb|AC122825.4| Mus musculus BAC clone RP23-209E13 from 10, complete sequence Length = 177676 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 166312 tcttcccctctccctctctccc 166291
>gb|AC101659.12| Mus musculus chromosome 7, clone RP23-202M11, complete sequence Length = 244819 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 ccttcttcccctctccctctctccca 36 |||||||||||||| ||||||||||| Sbjct: 102338 ccttcttcccctcttcctctctccca 102313
>gb|AC109217.7| Mus musculus chromosome 18, clone RP23-406P18, complete sequence Length = 196301 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 134459 tcttcccctctccctctctccc 134480
>gb|AC026512.6| Homo sapiens chromosome 15, clone RP11-375D9, complete sequence Length = 90707 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 28726 tcttcccctctccctctctccc 28747
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 gctggacgcgttccacgagcag 241 |||||||||||||||||||||| Sbjct: 424949 gctggacgcgttccacgagcag 424928
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcccgtcga 426 ||||||||||||||||||||| |||| Sbjct: 1933091 tgggactgccacggcctgcccatcga 1933066
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 acccctaaacccttcttcccct 22 |||||||||||||||||||||| Sbjct: 11904477 acccctaaacccttcttcccct 11904498
>gb|AC074329.2|AC074329 Mus musculus strain C57BL/6J chromosome 12 clone RP23-257D2, complete sequence Length = 207872 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 122655 tcttcccctctccctctctccc 122634
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 acccctaaacccttcttcccct 22 |||||||||||||||||||||| Sbjct: 85967 acccctaaacccttcttcccct 85988
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 acccctaaacccttcttcccct 22 |||||||||||||||||||||| Sbjct: 8957 acccctaaacccttcttcccct 8978
>emb|AL670024.7| Mouse DNA sequence from clone RP23-254F7 on chromosome X, complete sequence Length = 199747 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 24961 tcttcccctctccctctctccc 24940
>emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chromosome 2, complete sequence Length = 124244 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 89952 tcttcccctctccctctctccc 89931
>ref|NM_207941.1| Eremothecium gossypii AAR047Cp (AAR047C), mRNA Length = 978 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 gctggacgcgttccacgagcag 241 |||||||||||||||||||||| Sbjct: 573 gctggacgcgttccacgagcag 594
>emb|CR391989.15| Zebrafish DNA sequence from clone DKEY-263H23 in linkage group 19, complete sequence Length = 154561 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 ttcttcccctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 29890 ttcttcccctctccctctctcc 29911
>gb|AC102466.11| Mus musculus chromosome 3, clone RP24-337A2, complete sequence Length = 164455 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 97451 tcttcccctctccctctctccc 97430
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 915932 tcttcccctctccctctctccc 915953
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcccgtcga 426 ||||||||||||||||||||| |||| Sbjct: 71597 tgggactgccacggcctgcccatcga 71622
>gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182105 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 4977 tcttcccctctccctctctccc 4956
>gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, complete sequence Length = 196529 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 134357 tcttcccctctccctctctccc 134378 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 134325 tcttcccctctccctctctc 134344
>gb|AC157951.2| Gallus gallus BAC clone CH261-173J5 from chromosome unknown, complete sequence Length = 206432 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 ttcttcccctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 54946 ttcttcccctctccctctctcc 54925
>gb|AC145914.4| Gallus gallus BAC clone CH261-78G10 from chromosome unknown, complete sequence Length = 228201 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 ttcttcccctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 9292 ttcttcccctctccctctctcc 9313
>emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on chromosome 17, complete sequence Length = 219682 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 105330 tcttcccctctccctctctccc 105351
>emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chromosome 2, complete sequence Length = 213549 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctccc 35 |||||||||| ||||||||||||||| Sbjct: 183117 cccttcttcctctctccctctctccc 183142
>ref|NM_117100.2| Arabidopsis thaliana ATP binding / isoleucine-tRNA ligase/ tRNA ligase AT4G10320 mRNA, complete cds Length = 3769 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 266 gagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatc 325 |||| ||||||||||||||| || || || || ||||| || || |||||||| || ||| Sbjct: 121 gagtacatcttctacgacggacctccttttgccaccggacttcctcactacggacatatc 180 Query: 326 ctcgc 330 ||||| Sbjct: 181 ctcgc 185
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 147060 cttcccctctccctctctccc 147040
>gb|AC125377.5| Mus musculus BAC clone RP23-27C10 from chromosome 1, complete sequence Length = 227511 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctcc 34 |||||||||| |||||||||||||| Sbjct: 193437 cccttcttcctctctccctctctcc 193461
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence Length = 160429 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 49694 cttcccctctccctctctccc 49674
>gb|AC138597.7| Mus musculus chromosome 1, clone RP24-340D21, complete sequence Length = 147164 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctcc 34 |||||||||| |||||||||||||| Sbjct: 137967 cccttcttcctctctccctctctcc 137943
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 47693 cttcccctctccctctctccc 47713
>gb|AC135121.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0089M05, complete sequence Length = 131308 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 atcctcgccggcaccatcaaggacg 347 |||||| |||||||||||||||||| Sbjct: 12451 atcctctccggcaccatcaaggacg 12475
>ref|XM_534572.2| PREDICTED: Canis familiaris similar to neurofilament, light polypeptide 68kDa, transcript variant 1 (LOC477378), mRNA Length = 3626 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 133 cttcccctctccctctctccc 153
>ref|XM_853574.1| PREDICTED: Canis familiaris similar to neurofilament, light polypeptide 68kDa, transcript variant 4 (LOC477378), mRNA Length = 3350 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 133 cttcccctctccctctctccc 153
>ref|XM_853533.1| PREDICTED: Canis familiaris similar to neurofilament, light polypeptide 68kDa, transcript variant 3 (LOC477378), mRNA Length = 3460 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 96 cttcccctctccctctctccc 116
>ref|XM_382720.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02544.1) partial mRNA Length = 2580 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 136 ggccgaggccatggaggacgtgtgcgagg 164 |||||||||| ||||||||||| |||||| Sbjct: 2446 ggccgaggccgtggaggacgtgggcgagg 2474
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 14144 cttcccctctccctctctccc 14124
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ttcttcccctctccctctctc 33 ||||||||||||||||||||| Sbjct: 130920 ttcttcccctctccctctctc 130900
>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete sequence Length = 225685 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctccc 35 |||||| |||||||||||||||||| Sbjct: 147252 ccttctccccctctccctctctccc 147276 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctccc 35 |||||| |||||||||||||||||| Sbjct: 147222 ccttctccccctctccctctctccc 147246
>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence Length = 194338 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 70510 cttcccctctccctctctccc 70490
>gb|AC124488.3| Mus musculus BAC clone RP23-452K20 from chromosome 1, complete sequence Length = 178446 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ccttcttcccctctccctctctccc 35 ||||||||||||||||| ||||||| Sbjct: 92342 ccttcttcccctctccccctctccc 92318
>gb|AC125177.4| Mus musculus BAC clone RP23-315H8 from chromosome 8, complete sequence Length = 217567 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 136320 cttcccctctccctctctccc 136340
>gb|AC116581.4| Mus musculus BAC clone RP23-295E15 from 1, complete sequence Length = 156332 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctcc 34 |||||||||| |||||||||||||| Sbjct: 43695 cccttcttcctctctccctctctcc 43719
>gb|AC118474.10| Mus musculus chromosome 8, clone RP23-288O12, complete sequence Length = 191490 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 177874 cttcccctctccctctctccc 177854
>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence Length = 215975 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 49913 cttcccctctccctctctccc 49933
>emb|AL136964.8| Human DNA sequence from clone RP11-346C4 on chromosome 13 Contains the 5' end of a novel gene, a novel gene and 2 CpG islands,, complete sequence Length = 171991 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctcc 34 ||||||||||||||||||||| Sbjct: 153417 tcttcccctctccctctctcc 153437
>emb|AL008731.1|HS514K20 Human DNA sequence from clone RP3-514K20 on chromosome 6p22.3-24.3 Contains a CpG island, complete sequence Length = 100368 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctcc 34 ||||| ||||||||||||||||||| Sbjct: 76690 ccctttttcccctctccctctctcc 76666
>ref|XM_968491.1| PREDICTED: Tribolium castaneum similar to Isoleucyl-tRNA synthetase, cytoplasmic (Isoleucine--tRNA ligase) (IleRS) (IRS) (LOC662393), mRNA Length = 3624 Score = 42.1 bits (21), Expect = 1.5 Identities = 63/77 (81%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatcctcgccggc 334 ||||| ||||||||||| || |||||||| | ||||| || || ||||| || || || Sbjct: 139 ttctatgacggcccgccgtttgcgaccgggttgccccattatgggcacattctggcgggg 198 Query: 335 accatcaaggacgtggt 351 |||||||| |||||||| Sbjct: 199 accatcaaagacgtggt 215 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 395 ttcgggtgggactgccacggcctgcccgtcgagttcgagatcgacaag 442 ||||| ||||||||||| || || ||||| |||| |||||| |||||| Sbjct: 259 ttcggctgggactgccatgggctacccgtggagtacgagattgacaag 306
>gb|AC161816.5| Mus musculus BAC clone RP23-308L3 from chromosome 16, complete sequence Length = 213324 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 206188 cttcccctctccctctctccc 206168
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccca 36 ||||||||||||||||||||| Sbjct: 320534 ttcccctctccctctctccca 320554
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcccgtcgagtt 429 |||||||||||||| |||||| ||||||| Sbjct: 2892429 tgggactgccacggtctgcccatcgagtt 2892401
>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29 Length = 199861 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 266 gagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatc 325 |||| ||||||||||||||| || || || || ||||| || || |||||||| || ||| Sbjct: 36619 gagtacatcttctacgacggacctccttttgccaccggacttcctcactacggacatatc 36560 Query: 326 ctcgc 330 ||||| Sbjct: 36559 ctcgc 36555
>emb|AL049488.1|ATF24G24 Arabidopsis thaliana DNA chromosome 4, BAC clone F24G24 (ESSA project) Length = 99856 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 266 gagttcatcttctacgacggcccgcccttcgcgaccggcctcccccactacggccacatc 325 |||| ||||||||||||||| || || || || ||||| || || |||||||| || ||| Sbjct: 49951 gagtacatcttctacgacggacctccttttgccaccggacttcctcactacggacatatc 49892 Query: 326 ctcgc 330 ||||| Sbjct: 49891 ctcgc 49887
>gb|AY079084.1| Pseudomonas fluorescens NCIMB 10586 isoleucyl-tRNA synthetase gene, complete cds Length = 3540 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 281 gacggcccgcccttcgcgaccggcctcccccactacggcca 321 ||||||||||| || || |||||||| || ||||||||||| Sbjct: 498 gacggcccgccgtttgctaccggcctgccgcactacggcca 538
>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence Length = 174730 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ttcttcccctctccctctctc 33 ||||||||||||||||||||| Sbjct: 159980 ttcttcccctctccctctctc 160000
>gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosome 17, complete sequence Length = 202092 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctct 30 ||||||||||||||||||||| Sbjct: 89178 cccttcttcccctctccctct 89158
>gb|AF318063.2|AF318063S1 Pseudomonas fluorescens NCIMB 10586 mupirocin biosynthetic gene cluster Length = 75138 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 281 gacggcccgcccttcgcgaccggcctcccccactacggcca 321 ||||||||||| || || |||||||| || ||||||||||| Sbjct: 54576 gacggcccgccgtttgctaccggcctgccgcactacggcca 54616
>gb|AC182430.2| Pan troglodytes BAC clone CH251-398I16 from chromosome 4, complete sequence Length = 145600 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctccc 35 ||||||||||||||| ||||||||| Sbjct: 101680 ccttcttcccctctctctctctccc 101704
>gb|AC002060.4| Homo sapiens Chromosome 22q11.2 BAC Clone 142e2 In IGLC Region, complete sequence Length = 166287 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 148893 cttcccctctccctctctccc 148873
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 atcctcgccggcaccatcaaggacg 347 |||||| |||||||||||||||||| Sbjct: 16844705 atcctctccggcaccatcaaggacg 16844729
>gb|AC108021.3| Homo sapiens BAC clone RP11-8N8 from 4, complete sequence Length = 185972 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctccc 35 ||||||||||||||| ||||||||| Sbjct: 170477 ccttcttcccctctctctctctccc 170501
>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete sequence Length = 203726 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctcc 34 ||||||||||||||||||||| Sbjct: 99828 tcttcccctctccctctctcc 99808
>gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, complete sequence Length = 207983 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ttcttcccctctccctctctc 33 ||||||||||||||||||||| Sbjct: 48324 ttcttcccctctccctctctc 48304
>gb|AC154136.13| Mus musculus BAC RP23-184A3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 220233 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctccc 35 ||||||||| ||||||||||||||| Sbjct: 198318 ccttcttcctctctccctctctccc 198342
>dbj|AK111232.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-E12, full insert sequence Length = 3375 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 410 cacggcctgcccgtcgagttcgagatcgacaag 442 |||||| ||||| |||||| ||||||||||||| Sbjct: 265 cacggcgtgcccatcgagtacgagatcgacaag 297
>gb|AY928939.1| Fragaria x ananassa chloroplast chlorophyll a/b-binding protein CP24 precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 441 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 tcgccggcaccatcaaggacg 347 ||||||||||||||||||||| Sbjct: 338 tcgccggcaccatcaaggacg 358
>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence Length = 214433 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctct 30 ||||||||||||||||||||| Sbjct: 214166 cccttcttcccctctccctct 214186
>dbj|AB062785.1| Pseudomonas fluorescens ileS2 gene for isoleucyl-tRNA synthetase 2, complete cds Length = 3093 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 281 gacggcccgcccttcgcgaccggcctcccccactacggcca 321 ||||||||||| || || |||||||| || ||||||||||| Sbjct: 133 gacggcccgccgtttgctaccggcctgccgcactacggcca 173
>emb|AM181567.1| Microbacterium aurum partial rpoB gene for RNA polymerase subunit B, type strain DSM 8600 Length = 1085 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 178 tcgagttcgagatcgacaagc 198
>emb|AM181566.1| Microbacterium aurantiacum partial rpoB gene for RNA polymerase subunit B, type strain DSM 12506 Length = 1072 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 165 tcgagttcgagatcgacaagc 185
>emb|AM181565.1| Microbacterium arborescens partial rpoB gene for RNA polymerase subunit B, type strain DSM 20754 Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 176 tcgagttcgagatcgacaagc 196
>emb|AM181564.1| Microbacterium aerolatum partial rpoB gene for RNA polymerase subunit B, type strain DSM 14217 Length = 1172 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 183 tcgagttcgagatcgacaagc 203
>emb|AM181563.1| Agromyces albus partial rpoB gene for RNA polymerase subunit B, type strain DSM 15934 Length = 1030 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 176 tcgagttcgagatcgacaagc 196
>emb|AM181589.1| Microbacterium testaceum partial rpoB gene for RNA polymerase subunit B, type strain DSM 20166 Length = 1087 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 182 tcgagttcgagatcgacaagc 202
>emb|AM181588.1| Microbacterium terregens partial rpoB gene for RNA polymerase subunit B, type strain DSM 20449 Length = 1064 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 184 tcgagttcgagatcgacaagc 204
>emb|AM181587.1| Microbacterium schleiferi partial rpoB gene for RNA polymerase subunit B, type strain DSM 20489 Length = 1175 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 179 tcgagttcgagatcgacaagc 199
>emb|AM181586.1| Microbacterium saperdae partial rpoB gene for RNA polymerase subunit B, type strain DSM 20169 Length = 1094 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 184 tcgagttcgagatcgacaagc 204
>emb|AM181585.1| Microbacterium resistens partial rpoB gene for RNA polymerase subunit B, type strain DSM 11986 Length = 1044 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 181 tcgagttcgagatcgacaagc 201
>emb|AM181584.1| Microbacterium phyllosphaerae partial rpoB gene for RNA polymerase subunit B, type strain DSM 13468 Length = 1065 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 173 tcgagttcgagatcgacaagc 193
>emb|AM181583.1| Microbacterium oxydans partial rpoB gene for RNA polymerase subunit B, type strain DSM 20578 Length = 1093 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 187 tcgagttcgagatcgacaagc 207
>emb|AM181582.1| Microbacterium maritypicum partial rpoB gene for RNA polymerase subunit B, type strain DSM 12512 Length = 1093 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 184 tcgagttcgagatcgacaagc 204
>emb|AM181581.1| Microbacterium luteolum partial rpoB gene for RNA polymerase subunit B, type strain DSM 20143 Length = 1093 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 186 tcgagttcgagatcgacaagc 206
>emb|AM181580.1| Microbacterium laevaniformans partial rpoB gene for RNA polymerase subunit B, type strain DSM 20140 Length = 1086 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 180 tcgagttcgagatcgacaagc 200
>emb|AM181579.1| Microbacterium liquefaciens partial rpoB gene for RNA polymerase subunit B, type strain DSM 20638 Length = 1074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 167 tcgagttcgagatcgacaagc 187
>emb|AM181578.1| Microbacterium lacticum partial rpoB gene for RNA polymerase subunit B, type strain DSM 20427 Length = 1078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 174 tcgagttcgagatcgacaagc 194
>emb|AM181577.1| Microbacterium kitamiense partial rpoB gene for RNA polymerase subunit B, type strain DSM 13237 Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 174 tcgagttcgagatcgacaagc 194
>emb|AM181576.1| Microbacterium ketosireducens partial rpoB gene for RNA polymerase subunit B, type strain DSM 12510 Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 176 tcgagttcgagatcgacaagc 196
>emb|AM181575.1| Microbacterium keratanolyticum partial rpoB gene for RNA polymerase subunit B, type strain DSM 8606 Length = 1176 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 183 tcgagttcgagatcgacaagc 203
>emb|AM181574.1| Microbacterium imperiale partial rpoB gene for RNA polymerase subunit B, type strain DSM 20530 Length = 1085 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 179 tcgagttcgagatcgacaagc 199
>emb|AM181573.1| Microbacterium hominis partial rpoB gene for RNA polymerase subunit B, type strain DSM 12509 Length = 1090 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 184 tcgagttcgagatcgacaagc 204
>emb|AM181572.1| Microbacterium foliorum partial rpoB gene for RNA polymerase subunit B, type strain DSM 12966 Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 170 tcgagttcgagatcgacaagc 190
>emb|AM181571.1| Microbacterium flavescens partial rpoB gene for RNA polymerase subunit B, type strain DSM 20643 Length = 1078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 172 tcgagttcgagatcgacaagc 192
>emb|AM181570.1| Microbacterium esteraromaticum partial rpoB gene for RNA polymerase subunit B, type strain DSM 8609 Length = 1030 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 124 tcgagttcgagatcgacaagc 144
>emb|AM181569.1| Microbacterium dextranolyticum partial rpoB gene for RNA polymerase subunit B, type strain DSM 8607 Length = 1056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 182 tcgagttcgagatcgacaagc 202
>emb|AM181568.1| Microbacterium chocolatum partial rpoB gene for RNA polymerase subunit B, type strain DSM 12507 Length = 1091 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 tcgagttcgagatcgacaagc 443 ||||||||||||||||||||| Sbjct: 185 tcgagttcgagatcgacaagc 205
>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence Length = 170723 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 107878 cttcccctctccctctctccc 107858
>gb|AC092498.8| Mus musculus strain C57BL/6J chromosome 9 clone rp23-21l18, complete sequence Length = 233208 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 225034 cttcccctctccctctctccc 225054
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ggccaagctggacgcgttcca 234 ||||||||||||||||||||| Sbjct: 2917838 ggccaagctggacgcgttcca 2917818 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 3877525 tgggactgccacggcctgcc 3877506
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 atcctcgccggcaccatcaaggacg 347 |||||| |||||||||||||||||| Sbjct: 16938476 atcctctccggcaccatcaaggacg 16938500
>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence Length = 230437 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 118766 cttcccctctccctctctccc 118746
>gb|AC140243.2| Mus musculus BAC clone RP23-470F3 from 9, complete sequence Length = 201295 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 152229 cttcccctctccctctctccc 152209
>emb|CT009700.8| Mouse DNA sequence from clone RP23-114M15 on chromosome 13, complete sequence Length = 184143 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ttcttcccctctccctctctc 33 ||||||||||||||||||||| Sbjct: 63715 ttcttcccctctccctctctc 63735
>gb|AC155243.2| Mus musculus BAC clone RP24-555L7 from chromosome 12, complete sequence Length = 124993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 45093 cttcccctctccctctctccc 45073
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctcc 34 ||||||||||||| ||||||||||| Sbjct: 121159 cccttcttcccctttccctctctcc 121135
>emb|AL663053.12| Mouse DNA sequence from clone RP23-436M12 on chromosome 11, complete sequence Length = 203593 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 201386 cttcccctctccctctctccc 201366
>dbj|AP000361.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone N8E4 Length = 38437 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 21129 cttcccctctccctctctccc 21109
>emb|AL606749.13| Mouse DNA sequence from clone RP23-325J22 on chromosome 3, complete sequence Length = 89111 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 83391 cttcccctctccctctctccc 83411
>gb|AC114993.18| Mus musculus chromosome 5, clone RP23-42D10, complete sequence Length = 208968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 85499 cttcccctctccctctctcc 85518
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 291799 tgggactgccacggcctgcc 291780
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence Length = 190303 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 183416 ttcccctctccctctctccc 183435
>ref|XM_465784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 272 cccttcttcccctcttcctctctc 249
>ref|NM_183882.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cttcttcccctctccctctc 31 |||||||||||||||||||| Sbjct: 997 cttcttcccctctccctctc 978
>gb|AC104932.22| Mus musculus chromosome 3, clone RP24-337A16, complete sequence Length = 184718 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 100785 ttcccctctccctctctccc 100766
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 205189 tcttcccctctccctctctc 205208
>gb|AC124659.10| Mus musculus chromosome 15, clone RP24-167K18, complete sequence Length = 180859 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 64512 cttcccctctccctctctcc 64531
>gb|AC146932.3| Sus scrofa clone RP44-244C10, complete sequence Length = 130764 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 93856 tcttcccctctccctctctc 93875
>gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, complete sequence Length = 196806 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 58548 tcttcccctctccctctctc 58567
>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence Length = 220762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctc 29 |||||||||||||||||||| Sbjct: 188358 cccttcttcccctctccctc 188377
>ref|XM_363239.1| Magnaporthe grisea 70-15 hypothetical protein (MG01165.4) partial mRNA Length = 2925 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 280 tgggactgccacggcctgcc 299
>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence Length = 151577 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 6354 ttcccctctccctctctccc 6373
>gb|AC023285.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-333I11, complete sequence Length = 192255 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 37275 ttcccctctccctctctccc 37256
>gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome 9, complete sequence Length = 247463 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 154499 ttcccctctccctctctccc 154518
>gb|AC164554.2| Mus musculus BAC clone RP23-351O14 from chromosome 17, complete sequence Length = 192632 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 47345 tcttcccctctccctctctc 47364
>gb|AC102350.14| Mus musculus chromosome 9, clone RP23-323P3, complete sequence Length = 211216 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 30716 cttcccctctccctctctcc 30697
>gb|AC083884.6| Homo sapiens BAC clone RP11-813J7 from 7, complete sequence Length = 169604 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 ttcttcccctctccctctctcccaagtc 40 ||||| ||||||||||||| |||||||| Sbjct: 9300 ttctttccctctccctctcccccaagtc 9273
>gb|AC107741.15| Mus musculus chromosome 3, clone RP23-335P23, complete sequence Length = 212995 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcccctctccctctctccca 36 |||||||||||||||||||| Sbjct: 22127 tcccctctccctctctccca 22108
>emb|CR974470.7| L.saxatilis DNA sequence from clone CH317-148L22, complete sequence Length = 112797 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 98454 tcttcccctctccctctctc 98435
>gb|AC113470.14| Mus musculus chromosome 9, clone RP23-262N17, complete sequence Length = 202838 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 10002 cttcccctctccctctctcc 10021
>gb|AC089999.20| Homo sapiens 12 BAC RP11-545P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199522 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 189868 cttcccctctccctctctcc 189849
>gb|AC126254.3| Mus musculus BAC clone RP24-132D17 from chromosome 17, complete sequence Length = 167995 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 15092 cttcccctctccctctctcc 15111 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 15066 cttcccctctccctctctcc 15085
>gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosome 9, complete sequence Length = 200985 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 192355 ttcccctctccctctctccc 192374
>gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, complete sequence Length = 226926 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 43110 tcttcccctctccctctctc 43091
>gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, complete sequence Length = 203589 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccagctgtgggccaagctgg 224 |||||||||||||||||||| Sbjct: 124498 ccagctgtgggccaagctgg 124479
>emb|CR717779.2|CNS0GGS9 Tetraodon nigroviridis full-length cDNA Length = 830 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cctctccctctctcccaagtccaa 43 |||||||||| ||||||||||||| Sbjct: 259 cctctccctccctcccaagtccaa 236
>gb|AC118613.8| Mus musculus chromosome 6, clone RP23-442E2, complete sequence Length = 256556 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 133167 tcttcccctctccctctctc 133186
>gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome 3, complete sequence Length = 213637 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||| |||||||||||||||||| Sbjct: 207895 ccctttttcccctctccctctctc 207918
>emb|AL512290.11| Human DNA sequence from clone RP13-143G15 on chromosome 6 Contains a cytochrome c oxidase subunit Vb (COX5B) pseudogene, a novel gene and part of a novel gene, complete sequence Length = 133918 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctcc 34 ||||||||||||||| |||||||| Sbjct: 116251 ccttcttcccctctctctctctcc 116274
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 4040340 tgggactgccacggcctgcc 4040359
>ref|XM_796853.1| PREDICTED: Strongylocentrotus purpuratus similar to isoleucine-tRNA synthetase, transcript variant 3 (LOC577472), mRNA Length = 3876 Score = 40.1 bits (20), Expect = 6.0 Identities = 56/68 (82%) Strand = Plus / Plus Query: 287 ccgcccttcgcgaccggcctcccccactacggccacatcctcgccggcaccatcaaggac 346 |||||||| || ||||| || ||||||||||| |||||| | || || || |||||||| Sbjct: 139 ccgccctttgccaccggtctaccccactacggtcacatcttggctggaactatcaaggat 198 Query: 347 gtggtgac 354 || ||||| Sbjct: 199 gttgtgac 206
>ref|XM_796806.1| PREDICTED: Strongylocentrotus purpuratus similar to isoleucine-tRNA synthetase, transcript variant 2 (LOC577472), mRNA Length = 3909 Score = 40.1 bits (20), Expect = 6.0 Identities = 56/68 (82%) Strand = Plus / Plus Query: 287 ccgcccttcgcgaccggcctcccccactacggccacatcctcgccggcaccatcaaggac 346 |||||||| || ||||| || ||||||||||| |||||| | || || || |||||||| Sbjct: 139 ccgccctttgccaccggtctaccccactacggtcacatcttggctggaactatcaaggat 198 Query: 347 gtggtgac 354 || ||||| Sbjct: 199 gttgtgac 206
>ref|XM_775022.1| PREDICTED: Strongylocentrotus purpuratus similar to isoleucine-tRNA synthetase, transcript variant 1 (LOC577472), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 6.0 Identities = 56/68 (82%) Strand = Plus / Plus Query: 287 ccgcccttcgcgaccggcctcccccactacggccacatcctcgccggcaccatcaaggac 346 |||||||| || ||||| || ||||||||||| |||||| | || || || |||||||| Sbjct: 139 ccgccctttgccaccggtctaccccactacggtcacatcttggctggaactatcaaggat 198 Query: 347 gtggtgac 354 || ||||| Sbjct: 199 gttgtgac 206
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 2638554 tgggactgccacggcctgcc 2638535
>gb|AC164289.3| Mus musculus BAC clone RP23-380L19 from chromosome 6, complete sequence Length = 212908 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 17213 ttcccctctccctctctccc 17232
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 43810 tgggactgccacggcctgcc 43791
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 290293 tgggactgccacggcctgcc 290274
>emb|AL645913.12| Mouse DNA sequence from clone RP23-194G14 on chromosome 11 Contains the 3' end of gene 9130006A14Rik, the 5' end of the Rnf130 gene for ring finger protein 130 and a CpG island, complete sequence Length = 131007 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ccttcttcccctctccctct 30 |||||||||||||||||||| Sbjct: 106900 ccttcttcccctctccctct 106881
>emb|AL808020.3| Mouse DNA sequence from clone RP23-387B24 on chromosome 11, complete sequence Length = 156808 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 134598 ttcccctctccctctctccc 134579
>emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on chromosome X, complete sequence Length = 200566 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 111571 ttcccctctccctctctccc 111590 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 69946 ttcccctctccctctctccc 69927
>gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosome 12, complete sequence Length = 171366 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 55077 tcttcccctctccctctctc 55058
>emb|BX957314.11| Zebrafish DNA sequence from clone CH211-114K5 in linkage group 16, complete sequence Length = 90695 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 43870 ttcccctctccctctctccc 43889
>gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of the complete genome Length = 12357 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 7087 tgggactgccacggcctgcc 7068
>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence Length = 148726 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccttcttcccctctccctctctcc 34 |||||||||| ||||||||||||| Sbjct: 101683 ccttcttcccttctccctctctcc 101706
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 1804948 tgggactgccacggcctgcc 1804967
>gb|AC004883.3| Homo sapiens PAC clone RP4-771P4 from 7q11.2, complete sequence Length = 131359 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 ttcttcccctctccctctctcccaagtc 40 ||||| ||||||||||||| |||||||| Sbjct: 125189 ttctttccctctccctctcccccaagtc 125216
>gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complete sequence Length = 160929 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctc 29 |||||||||||||||||||| Sbjct: 154440 cccttcttcccctctccctc 154459
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcccgtcgagt 428 |||||||||||||| |||||| |||||| Sbjct: 3519027 tgggactgccacggtctgcccatcgagt 3519054
>gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosome 6, complete sequence Length = 225957 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 15418 tcttcccctctccctctctc 15399
>emb|BX321896.13| Zebrafish DNA sequence from clone RP71-49B22 in linkage group 23, complete sequence Length = 165985 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 ggcgccacgtgatgcggcgcttcgggtg 402 ||||| ||||||||||||||||| |||| Sbjct: 53261 ggcgctacgtgatgcggcgcttctggtg 53234
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 3416081 tgggactgccacggcctgcc 3416100
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccacggcctgcccgtcgagt 428 |||||||||||||||||||| Sbjct: 2215656 ccacggcctgcccgtcgagt 2215637
>gb|AC144859.3| Mus musculus BAC clone RP24-158C2 from chromosome 5, complete sequence Length = 170762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 12028 cttcccctctccctctctcc 12009
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 4757129 tgggactgccacggcctgcc 4757110
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 3789788 tgggactgccacggcctgcc 3789807
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 1950902 tgggactgccacggcctgcc 1950921
>gb|AC158609.10| Mus musculus 6 BAC RP24-89F5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gaggccgaggccatggagga 153 |||||||||||||||||||| Sbjct: 126224 gaggccgaggccatggagga 126205
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 7109299 tcttcccctctccctctctc 7109280 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 5962124 cccttcttcccctcttcctctctc 5962147
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 5062007 cccttcttcccctcttcctctctc 5062030
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 19361128 cccttcttcccctcttcctctctc 19361105 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cttcttcccctctccctctc 31 |||||||||||||||||||| Sbjct: 12916895 cttcttcccctctccctctc 12916914
>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence Length = 177771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 170175 ttcccctctccctctctccc 170156
>gb|AC151966.3| Mus musculus BAC clone RP24-178P9 from chromosome 9, complete sequence Length = 159840 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 102692 ttcccctctccctctctccc 102711
>gb|AC013722.8| Homo sapiens BAC clone RP11-299H21 from 2, complete sequence Length = 207576 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 44363 cttcccctctccctctctcc 44382
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 89133 cccttcttcccctcttcctctctc 89110
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 2732174 tgggactgccacggcctgcc 2732155
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 99564 cccttcttcccctcttcctctctc 99587
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 8215950 tgggactgccacggcctgcc 8215969
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 6768907 tgggactgccacggcctgcc 6768926
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 |||||||||| ||||||||||||| Sbjct: 48564 cccttcttcctctctccctctctc 48587
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cttcttcccctctccctctc 31 |||||||||||||||||||| Sbjct: 68336 cttcttcccctctccctctc 68355
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 18297 cccttcttcccctcttcctctctc 18320
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 87279 cccttcttcccctcttcctctctc 87256
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 3270 cccttcttcccctcttcctctctc 3247
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 163956 cccttcttcccctcttcctctctc 163933
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 11771 cccttcttcccctcttcctctctc 11794
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 4991049 tgggactgccacggcctgcc 4991030
>emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on chromosome 12, complete sequence Length = 240699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 135118 tcttcccctctccctctctc 135137
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 1359250 tgggactgccacggcctgcc 1359269
>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence Length = 235239 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcccctctccctctctccc 35 |||||||||||||||||||| Sbjct: 131358 ttcccctctccctctctccc 131339
>emb|AL161733.20| Human DNA sequence from clone RP11-83J21 on chromosome 9, complete sequence Length = 176466 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 acccttcttcccctctccctctctccca 36 ||||||||| ||||||||||| |||||| Sbjct: 132601 acccttcttaccctctccctccctccca 132628
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||| |||||||||||||||||| Sbjct: 166119 ccctttttcccctctccctctctc 166096
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 710483 tgggactgccacggcctgcc 710502
>gb|AC103623.13| Mus musculus chromosome 5, clone RP24-253A20, complete sequence Length = 170641 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttcccctctccctctctcc 34 |||||||||||||||||||| Sbjct: 33029 cttcccctctccctctctcc 33048
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cggcctgcccgtcgagttcg 431 |||||||||||||||||||| Sbjct: 489956 cggcctgcccgtcgagttcg 489975
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 275 ttctacgacggcccgcccttcgcgaccggcctcccccactacggccac 322 ||||||||||| ||||| ||||| | ||| || || |||||||||||| Sbjct: 1324560 ttctacgacgggccgccgttcgccaacgggctgccgcactacggccac 1324607
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gggtgggactgccacggcct 417 |||||||||||||||||||| Sbjct: 148172 gggtgggactgccacggcct 148191
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete sequence Length = 212007 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gggactgccacggcctgccc 421 |||||||||||||||||||| Sbjct: 79115 gggactgccacggcctgccc 79134
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 7109178 tcttcccctctccctctctc 7109159 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 5962093 cccttcttcccctcttcctctctc 5962116
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 17599 tcttcccctctccctctctc 17580
>emb|AL732382.5|CNS08C95 Oryza sativa chromosome 12, . BAC OJ1126_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104737 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 80934 cccttcttcccctcttcctctctc 80911
>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 169662 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccttcttcccctctccctctctc 33 ||||||||||||||| |||||||| Sbjct: 157769 cccttcttcccctcttcctctctc 157792
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tgggactgccacggcctgcc 420 |||||||||||||||||||| Sbjct: 418905 tgggactgccacggcctgcc 418924
>gb|AC132589.4| Mus musculus BAC clone RP24-258M24 from 1, complete sequence Length = 168097 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 7935 tcttcccctctccctctctc 7954
>gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complete sequence Length = 193191 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cttcttcccctctccctctc 31 |||||||||||||||||||| Sbjct: 65218 cttcttcccctctccctctc 65237
>emb|CT009630.16| Mouse DNA sequence from clone RP23-12B13 on chromosome 17, complete sequence Length = 240447 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tcttcccctctccctctctc 33 |||||||||||||||||||| Sbjct: 135512 tcttcccctctccctctctc 135493
>gb|AC138302.3| Mus musculus BAC clone RP24-554C14 from 3, complete sequence Length = 152548 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccttcttcccctctccctctctc 33 ||||| |||||||||||||||||| Sbjct: 12503 ccctttttcccctctccctctctc 12480
>gb|AC114921.5| Mus musculus BAC clone RP23-202P9 from 6, complete sequence Length = 207908 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gaggccgaggccatggagga 153 |||||||||||||||||||| Sbjct: 26513 gaggccgaggccatggagga 26532
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctaaacccttcttcccctc 23 |||||||||||||||||||| Sbjct: 15670 cctaaacccttcttcccctc 15689
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tcgagttcgagatcgacaag 442 |||||||||||||||||||| Sbjct: 1086336 tcgagttcgagatcgacaag 1086317 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,496,846 Number of Sequences: 3902068 Number of extensions: 3496846 Number of successful extensions: 118896 Number of sequences better than 10.0: 253 Number of HSP's better than 10.0 without gapping: 258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115228 Number of HSP's gapped (non-prelim): 3661 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
