ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
2dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
3dbj|AK073793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
5dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
6dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,... 62 2e-06
8gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxyge... 62 2e-06
9emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.40
10dbj|AB189642.1| Halorhodospira halophila rnfA, nifA, nifB genes ... 42 1.6
11ref|XM_493755.2| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
12gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.3
13gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complet... 40 6.3
14emb|Z98056.2|SPAC5D6 S.pombe chromosome I cosmid c5D6 40 6.3
15gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.3
16gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.3
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
18dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
19dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
20dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
21dbj|AK070173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
22gb|AC147184.3| Mus musculus BAC clone RP24-286F20 from 1, comple... 40 6.3
23dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.3
24emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chro... 40 6.3
25dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  125 bits (63), Expect = 1e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                            
Query: 123      acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
                ||||| |||||||||||||| ||||||||| |||  ||||||| ||||||||| ||| ||
Sbjct: 32901846 acgctactggagatcaagaagtccttccgcaatgtggacaacgtgctgtacgattgggcc 32901905

                                                                            
Query: 183      ggcgacggggcgtccccgggctactgctcctggcgcggcgtgctctgcgacaacgtcacc 242
                ||||| || ||| | | | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32901906 ggcgatggcgcgccgcggcgctactgctcgtggcgcggcgtgctctgcgacaacgtcacc 32901965

                   
Query: 243      ttc 245
                |||
Sbjct: 32901966 ttc 32901968



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 340      agtcgaatggactctccgggcagatccctgacgagattggtgattgctcgtcgcttaaa 398
                ||||||||| ||| || |||||||||||||| |||||||| |||||| |||||||||||
Sbjct: 32902251 agtcgaatgaactttctgggcagatccctgatgagattggcgattgcacgtcgcttaaa 32902309



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                            
Query: 260      caacctctcagggttcaatctcggcggcgagatctccccggccttcggggatttgaagag 319
                ||||||||| ||| ||||||| || ||||| |||||||||||| ||||| || |||| ||
Sbjct: 32902067 caacctctcggggctcaatcttgggggcgaaatctccccggccatcgggaatctgaaaag 32902126

                     
Query: 320      cgtcg 324
                |||||
Sbjct: 32902127 cgtcg 32902131



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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1534_E09
          Length = 126209

 Score =  125 bits (63), Expect = 1e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                         
Query: 123   acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
             ||||| |||||||||||||| ||||||||| |||  ||||||| ||||||||| ||| ||
Sbjct: 56587 acgctactggagatcaagaagtccttccgcaatgtggacaacgtgctgtacgattgggcc 56646

                                                                         
Query: 183   ggcgacggggcgtccccgggctactgctcctggcgcggcgtgctctgcgacaacgtcacc 242
             ||||| || ||| | | | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 56647 ggcgatggcgcgccgcggcgctactgctcgtggcgcggcgtgctctgcgacaacgtcacc 56706

                
Query: 243   ttc 245
             |||
Sbjct: 56707 ttc 56709



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 340   agtcgaatggactctccgggcagatccctgacgagattggtgattgctcgtcgcttaaa 398
             ||||||||| ||| || |||||||||||||| |||||||| |||||| |||||||||||
Sbjct: 56992 agtcgaatgaactttctgggcagatccctgatgagattggcgattgcacgtcgcttaaa 57050



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 260   caacctctcagggttcaatctcggcggcgagatctccccggccttcggggatttgaagag 319
             ||||||||| ||| ||||||| || ||||| |||||||||||| ||||| || |||| ||
Sbjct: 56808 caacctctcggggctcaatcttgggggcgaaatctccccggccatcgggaatctgaaaag 56867

                  
Query: 320   cgtcg 324
             |||||
Sbjct: 56868 cgtcg 56872



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>dbj|AK073793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070P05, full
           insert sequence
          Length = 3673

 Score =  125 bits (63), Expect = 1e-25
 Identities = 153/183 (83%)
 Strand = Plus / Plus

                                                                       
Query: 203 ctactgctcctggcgcggcgtgctctgcgacaacgtcaccttccaagttgcagctctcaa 262
           ||||||||| ||||||||||| |||||||||||||||||||||   || || || |||||
Sbjct: 524 ctactgctcgtggcgcggcgtcctctgcgacaacgtcaccttcgccgtcgccgcgctcaa 583

                                                                       
Query: 263 cctctcagggttcaatctcggcggcgagatctccccggccttcggggatttgaagagcgt 322
           ||| || ||| |||| ||||| ||||||||||| |||||| ||||    |||||| || |
Sbjct: 584 cctatccgggctcaacctcggaggcgagatctctccggccgtcggcaggttgaagggcat 643

                                                                       
Query: 323 cgtgtcaattgatttgcagtcgaatggactctccgggcagatccctgacgagattggtga 382
           ||| || ||||| ||| |||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 644 cgtctcgattgacttgaagtcgaatgggctgtctgggcagatccctgatgagattggcga 703

              
Query: 383 ttg 385
           |||
Sbjct: 704 ttg 706



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 123 acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
           |||||||||||||||||||| ||||||||| |||  |||||||  |||||||| ||| ||
Sbjct: 456 acgctgctggagatcaagaagtccttccgcaatgtggacaacgtactgtacgattgggcc 515

               
Query: 183 ggcg 186
           ||||
Sbjct: 516 ggcg 519



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                          
Query: 203     ctactgctcctggcgcggcgtgctctgcgacaacgtcaccttc 245
               ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 5261305 ctactgctcgtggcgcggcgtcctctgcgacaacgtcaccttc 5261263



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                           
Query: 123     acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
               |||||||||||||||||||| ||||||||| |||  |||||||  |||||||| ||| ||
Sbjct: 5261373 acgctgctggagatcaagaagtccttccgcaatgtggacaacgtactgtacgattgggcc 5261314

                   
Query: 183     ggcg 186
               ||||
Sbjct: 5261313 ggcg 5261310



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 340     agtcgaatggactctccgggcagatccctgacgagattggtgattg 385
               |||||||||| || || |||||||||||||| |||||||| |||||
Sbjct: 5260982 agtcgaatgggctgtctgggcagatccctgatgagattggcgattg 5260937



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 222     gtgctctgcgacaacgtcaccttc 245
               ||||||||||||||| ||||||||
Sbjct: 9109086 gtgctctgcgacaacatcaccttc 9109109



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 260     caacctctcagggttcaatctcggcggcgagatctccccggccttcgg 307
               |||||| || ||| |||| ||||| ||||||||||| |||||| ||||
Sbjct: 5261161 caacctatccgggctcaacctcggaggcgagatctctccggccgtcgg 5261114



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>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0015B15
          Length = 123083

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 203  ctactgctcctggcgcggcgtgctctgcgacaacgtcaccttc 245
            ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 2817 ctactgctcgtggcgcggcgtcctctgcgacaacgtcaccttc 2775



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 123  acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
            |||||||||||||||||||| ||||||||| |||  |||||||  |||||||| ||| ||
Sbjct: 2885 acgctgctggagatcaagaagtccttccgcaatgtggacaacgtactgtacgattgggcc 2826

                
Query: 183  ggcg 186
            ||||
Sbjct: 2825 ggcg 2822



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 340  agtcgaatggactctccgggcagatccctgacgagattggtgattg 385
            |||||||||| || || |||||||||||||| |||||||| |||||
Sbjct: 2494 agtcgaatgggctgtctgggcagatccctgatgagattggcgattg 2449



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 260  caacctctcagggttcaatctcggcggcgagatctccccggccttcgg 307
            |||||| || ||| |||| ||||| ||||||||||| |||||| ||||
Sbjct: 2673 caacctatccgggctcaacctcggaggcgagatctctccggccgtcgg 2626



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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016O19
          Length = 169120

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                         
Query: 203    ctactgctcctggcgcggcgtgctctgcgacaacgtcaccttc 245
              ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 128027 ctactgctcgtggcgcggcgtcctctgcgacaacgtcaccttc 127985



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 123    acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
              |||||||||||||||||||| ||||||||| |||  |||||||  |||||||| ||| ||
Sbjct: 128095 acgctgctggagatcaagaagtccttccgcaatgtggacaacgtactgtacgattgggcc 128036

                  
Query: 183    ggcg 186
              ||||
Sbjct: 128035 ggcg 128032



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 340    agtcgaatggactctccgggcagatccctgacgagattggtgattg 385
              |||||||||| || || |||||||||||||| |||||||| |||||
Sbjct: 127704 agtcgaatgggctgtctgggcagatccctgatgagattggcgattg 127659



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 260    caacctctcagggttcaatctcggcggcgagatctccccggccttcgg 307
              |||||| || ||| |||| ||||| ||||||||||| |||||| ||||
Sbjct: 127883 caacctatccgggctcaacctcggaggcgagatctctccggccgtcgg 127836



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>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
            aminoalcoholphosphotransferase, putative
            growth-regulating factor 1, putative GAG-POL precursor,
            putative GAG-POL precursor, putative RIRE2 orf3, putative
            anthocyanin regulatory C1, putative protein T30F21.6,
            putative copia polyprotein, putative copia polyprotein,
            putative protein NP_196765.1, and gb protein genes,
            complete cds; and putative zinc finger protein gene,
            partial cds
          Length = 144159

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 203  ctactgctcctggcgcggcgtgctctgcgacaacgtcac 241
            ||||||||||||||||||||| || ||||||||||||||
Sbjct: 7501 ctactgctcctggcgcggcgtcctgtgcgacaacgtcac 7463



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 340  agtcgaatggactctccgggcagatccctgacgagattggtgattg 385
            |||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 7181 agtcaaatgggctatccgggcagatccctgatgagattggtgattg 7136



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 123  acgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtcc 182
            |||||| ||||||||||||| ||||||||| | | || |||||  |||||||| ||| ||
Sbjct: 7569 acgctggtggagatcaagaagtccttccgcaacgtcggcaacgtactgtacgattgggcc 7510

                   
Query: 183  ggcgacg 189
            |||||||
Sbjct: 7509 ggcgacg 7503



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>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3),
              anthocyanin biosynthesis regulatory protein Pl1_B73
              (Z576C20.4), putative growth-regulating factor 1
              (Z576C20.6), and putative aminoalcoholphosphotransferase
              (Z576C20.14) genes, complete cds; and putative receptor
              protein kinase (Z576C20.21) gene, partial cds
          Length = 155173

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 203    ctactgctcctggcgcggcgtgctctgcgacaacgtcac 241
              ||||||||||||||||||||| || ||||||||||||||
Sbjct: 154398 ctactgctcctggcgcggcgtcctgtgcgacaacgtcac 154436



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 340    agtcgaatggactctccgggcagatccctgacgagattggtgattg 385
              |||| ||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 154735 agtcaaatggcctatccgggcagatccctgatgagattggcgattg 154780



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                          
Query: 124    cgctgctggagatcaagaaatccttccgcgatgccgacaacgcgctgtacgactggtccg 183
              ||||| ||||||||||||| ||||||||| | | || |||||  |||||||| ||| |||
Sbjct: 154331 cgctggtggagatcaagaagtccttccgcaacgtcggcaacgtactgtacgattgggccg 154390

                    
Query: 184    gcgacg 189
              ||||||
Sbjct: 154391 gcgacg 154396



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 149     ccgcgatgccgacaacgcgctg 170
               ||||||||||||||||||||||
Sbjct: 2214128 ccgcgatgccgacaacgcgctg 2214107



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>dbj|AB189642.1| Halorhodospira halophila rnfA, nifA, nifB genes for RnfA, NifA, NifB,
            complete and partial cds
          Length = 3791

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 285  ggcgagatctccccggccttc 305
            |||||||||||||||||||||
Sbjct: 2165 ggcgagatctccccggccttc 2185



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>ref|XM_493755.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3289

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 399  tgttgaacctgtcctccaacaatctgga 426
            ||||||||||||||| |||||| |||||
Sbjct: 2876 tgttgaacctgtcctacaacaagctgga 2903



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    cggcgtgctctgcgacaacgtcac 241
              |||||||||| |||||||||||||
Sbjct: 927606 cggcgtgctcggcgacaacgtcac 927629



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>gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complete sequence
          Length = 133439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tgcagctctcaacctctcag 270
            ||||||||||||||||||||
Sbjct: 5258 tgcagctctcaacctctcag 5239



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>emb|Z98056.2|SPAC5D6 S.pombe chromosome I cosmid c5D6
          Length = 21852

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   gagcgtcgtgtcaattgatt 336
             ||||||||||||||||||||
Sbjct: 11999 gagcgtcgtgtcaattgatt 12018



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     tcggcggcgagatctccccg 299
               ||||||||||||||||||||
Sbjct: 2945188 tcggcggcgagatctccccg 2945207



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    ccgcgatgccgacaacgcgc 168
              ||||||||||||||||||||
Sbjct: 245630 ccgcgatgccgacaacgcgc 245611



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 399     tgttgaacctgtcctccaacaatctgga 426
               ||||||||||||||| |||||| |||||
Sbjct: 3067363 tgttgaacctgtcctacaacaagctgga 3067336



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>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0662B01
          Length = 155913

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 222  gtgctctgcgacaacgtcaccttc 245
            ||||||||||||||| ||||||||
Sbjct: 3108 gtgctctgcgacaacatcaccttc 3131



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>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0041E11
          Length = 146335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 399   tgttgaacctgtcctccaacaatctgga 426
             ||||||||||||||| |||||| |||||
Sbjct: 11151 tgttgaacctgtcctacaacaagctgga 11124



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>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0084K06
          Length = 177895

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 222    gtgctctgcgacaacgtcaccttc 245
              ||||||||||||||| ||||||||
Sbjct: 156404 gtgctctgcgacaacatcaccttc 156427



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>dbj|AK070173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041K23, full
            insert sequence
          Length = 3289

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 399  tgttgaacctgtcctccaacaatctgga 426
            ||||||||||||||| |||||| |||||
Sbjct: 2876 tgttgaacctgtcctacaacaagctgga 2903



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>gb|AC147184.3| Mus musculus BAC clone RP24-286F20 from 1, complete sequence
          Length = 176857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   ttccaagttgcagctctcaa 262
             ||||||||||||||||||||
Sbjct: 84998 ttccaagttgcagctctcaa 85017



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>dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034a,
             complete sequence
          Length = 83232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 351   ctctccgggcagatccctgacgagattggtga 382
             |||||||||||||| || || |||||||||||
Sbjct: 78868 ctctccgggcagataccagatgagattggtga 78837



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>emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chromosome 4, complete
              sequence
          Length = 249021

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    tccaacaatctggaaggaga 432
              ||||||||||||||||||||
Sbjct: 121961 tccaacaatctggaaggaga 121942



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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 399   tgttgaacctgtcctccaacaatctgga 426
             ||||||||||||||| |||||| |||||
Sbjct: 35403 tgttgaacctgtcctacaacaagctgga 35376


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,362,061
Number of Sequences: 3902068
Number of extensions: 2362061
Number of successful extensions: 37262
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37035
Number of HSP's gapped (non-prelim): 225
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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