Clone Name | bastl55d09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SESN3_HUMAN (P58005) Sestrin-3 | 29 | 6.0 | 2 | Y2081_MYCTU (Q10689) Hypothetical protein Rv2081c/MT2143 | 29 | 6.0 | 3 | SESN3_MOUSE (Q9CYP7) Sestrin-3 | 28 | 7.9 | 4 | TRMB_COREF (Q8FM11) tRNA (guanine-N(7)-)-methyltransferase (EC 2... | 28 | 7.9 | 5 | RP54_AZOCA (P33984) RNA polymerase sigma-54 factor | 28 | 7.9 | 6 | CJ095_HUMAN (Q9H7T3) Protein C10orf95 | 28 | 7.9 | 7 | FTHS_SHEON (Q8EJA7) Formate--tetrahydrofolate ligase (EC 6.3.4.3... | 28 | 7.9 |
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>SESN3_HUMAN (P58005) Sestrin-3| Length = 492 Score = 28.9 bits (63), Expect = 6.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 409 ENKRTPALEPLARGPSAILPEERLGSGSEV 320 ++KR +PL RGPSA +PE+ + + V Sbjct: 26 KDKRIRVSQPLTRGPSAFIPEKEVVQANTV 55
>Y2081_MYCTU (Q10689) Hypothetical protein Rv2081c/MT2143| Length = 146 Score = 28.9 bits (63), Expect = 6.0 Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Frame = +2 Query: 221 GDYVAAIASAVP-HIFHPSAFAEVAQGSPTQAYADLTAAAEAFLREDGGGAASEGFQC 391 G V A A P + SA + A S T A A L AA LRE GG G C Sbjct: 40 GSAVVPAAVAGPLFVGRVSATIKAAAPSTTAAIATLATAANGQLRERGGAGGWVGVHC 97
>SESN3_MOUSE (Q9CYP7) Sestrin-3| Length = 492 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -2 Query: 409 ENKRTPALEPLARGPSAILPEERL 338 ++KR +PL RGPSA +PE+ + Sbjct: 26 KDKRIRVSQPLTRGPSAFIPEKEV 49
>TRMB_COREF (Q8FM11) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 254 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 375 ARGSSAGVRLFSPRRWPRCSHSR 443 A GS GVR+F P WP+ H++ Sbjct: 145 ADGSLDGVRIFFPDPWPKARHNK 167
>RP54_AZOCA (P33984) RNA polymerase sigma-54 factor| Length = 514 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 352 PEERLGSGSEVGVSLRWGALGN 287 P ER+G+GS G S+ WG+ G+ Sbjct: 112 PAERIGAGSGSGSSIEWGSGGD 133
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 7/44 (15%) Frame = +3 Query: 318 PTSLPLPRRSSG-------RMAEGPRARGSSAGVRLFSPRRWPR 428 P P PRR G R GP +S R PRRWPR Sbjct: 110 PPRHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPR 153
>FTHS_SHEON (Q8EJA7) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 570 Score = 28.5 bits (62), Expect = 7.9 Identities = 13/51 (25%), Positives = 23/51 (45%) Frame = +2 Query: 245 SAVPHIFHPSAFAEVAQGSPTQAYADLTAAAEAFLREDGGGAASEGFQCRC 397 + P + H FA +A G+ + D+ F+ +GG + GF+ C Sbjct: 274 NGAPCLIHAGPFANIAHGNSSVIADDIALKLADFVVTEGGFGSDMGFEKFC 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,222,346 Number of Sequences: 219361 Number of extensions: 366462 Number of successful extensions: 1533 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1533 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)