ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55d07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FA61A_PONPY (Q5R4R4) Protein FAM61A | 108 | 7e-24 | 2 | FA61A_HUMAN (Q8ND56) Protein FAM61A (Putative alpha synuclein-bi... | 108 | 7e-24 | 3 | FA61A_MOUSE (Q8K2F8) Protein FAM61A | 108 | 7e-24 | 4 | FA61B_XENTR (Q566L7) Protein FAM61B homolog | 102 | 4e-22 | 5 | FA61B_MOUSE (Q8CGC4) Protein FAM61B | 101 | 9e-22 | 6 | FA61B_HUMAN (Q9BX40) Protein FAM61B | 101 | 9e-22 | 7 | SUM2_SCHPO (Q9HGL3) Protein sum2 | 101 | 1e-21 | 8 | SCD6_YEAST (P45978) Protein SCD6 | 63 | 5e-10 | 9 | FTSK_CHLMU (Q9PLI7) DNA translocase ftsK | 30 | 2.6 | 10 | EATA_ECOLI (Q84GK0) Serine protease eatA precursor (EC 3.4.21.-)... | 30 | 2.6 | 11 | PBP1_YEAST (P53297) PAB1-binding protein 1 | 30 | 4.4 | 12 | SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22 | 29 | 5.7 | 13 | SYFA_CARHZ (Q3ABT4) Phenylalanyl-tRNA synthetase alpha chain (EC... | 29 | 7.5 | 14 | FTSK_CHLTR (O84744) DNA translocase ftsK | 29 | 7.5 |
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>FA61A_PONPY (Q5R4R4) Protein FAM61A| Length = 463 Score = 108 bits (270), Expect = 7e-24 Identities = 57/92 (61%), Positives = 69/92 (75%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 261 YIGS ISL SK+EIRYEG+LYTI+TE S++ L VRSFG+E R D + IP D+++EYI Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPIPPRDEVFEYI 65 Query: 262 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 357 +FRGSDIKDL V PP SL DPAI+QS Sbjct: 66 IFRGSDIKDLTV-CEPPKPQCSLPQDPAIVQS 96
>FA61A_HUMAN (Q8ND56) Protein FAM61A (Putative alpha synuclein-binding protein)| (AlphaSNBP) Length = 463 Score = 108 bits (270), Expect = 7e-24 Identities = 57/92 (61%), Positives = 69/92 (75%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 261 YIGS ISL SK+EIRYEG+LYTI+TE S++ L VRSFG+E R D + IP D+++EYI Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPIPPRDEVFEYI 65 Query: 262 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 357 +FRGSDIKDL V PP SL DPAI+QS Sbjct: 66 IFRGSDIKDLTV-CEPPKPQCSLPQDPAIVQS 96
>FA61A_MOUSE (Q8K2F8) Protein FAM61A| Length = 462 Score = 108 bits (270), Expect = 7e-24 Identities = 57/92 (61%), Positives = 69/92 (75%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 261 YIGS ISL SK+EIRYEG+LYTI+TE S++ L VRSFG+E R D + IP D+++EYI Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPIPPRDEVFEYI 65 Query: 262 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 357 +FRGSDIKDL V PP SL DPAI+QS Sbjct: 66 IFRGSDIKDLTV-CEPPKPQCSLPQDPAIVQS 96
>FA61B_XENTR (Q566L7) Protein FAM61B homolog| Length = 382 Score = 102 bits (255), Expect = 4e-22 Identities = 53/92 (57%), Positives = 68/92 (73%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 261 YIGS ISL SK++IRYEG+LYTI+TE S++ L VRSFG+E R D + P +++YEYI Sbjct: 7 YIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPAPPREEVYEYI 65 Query: 262 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 357 +FRGSDIKD+ V PP +L DPAI+QS Sbjct: 66 IFRGSDIKDITV-CEPPKASHALPQDPAIVQS 96
>FA61B_MOUSE (Q8CGC4) Protein FAM61B| Length = 385 Score = 101 bits (252), Expect = 9e-22 Identities = 53/92 (57%), Positives = 69/92 (75%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 261 Y+GS ISL SK++IRYEG+LYTI+T+ S++ L VRSFG+E R D + P ++IYEYI Sbjct: 9 YLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTD-RPAPPREEIYEYI 67 Query: 262 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 357 +FRGSDIKD+ V P AQ +L DPAI+QS Sbjct: 68 IFRGSDIKDITVCEPPKAQ-HTLPQDPAIVQS 98
>FA61B_HUMAN (Q9BX40) Protein FAM61B| Length = 385 Score = 101 bits (252), Expect = 9e-22 Identities = 53/92 (57%), Positives = 69/92 (75%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 261 Y+GS ISL SK++IRYEG+LYTI+T+ S++ L VRSFG+E R D + P ++IYEYI Sbjct: 9 YLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTD-RPAPPREEIYEYI 67 Query: 262 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 357 +FRGSDIKD+ V P AQ +L DPAI+QS Sbjct: 68 IFRGSDIKDITVCEPPKAQ-HTLPQDPAIVQS 98
>SUM2_SCHPO (Q9HGL3) Protein sum2| Length = 426 Score = 101 bits (251), Expect = 1e-21 Identities = 51/97 (52%), Positives = 75/97 (77%), Gaps = 4/97 (4%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKD-GQQIPASDKIYEY 258 +IGS ISL SKS+IRY G+L IN+++S++ L++VR G+EGRK+D Q+IP SD +++Y Sbjct: 4 FIGSRISLISKSDIRYVGILQDINSQDSTLALKHVRWCGTEGRKQDPSQEIPPSDNVFDY 63 Query: 259 ILFRGSDIKDLQVK---SSPPAQPASLHNDPAIIQSH 360 I+FRGSD+KDL+++ ++P A P NDPAII S+ Sbjct: 64 IVFRGSDVKDLRIEEPATTPSAPPVQPPNDPAIIGSN 100
>SCD6_YEAST (P45978) Protein SCD6| Length = 349 Score = 62.8 bits (151), Expect = 5e-10 Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Frame = +1 Query: 82 YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDG-QQIPASDKIYEY 258 YIG ISL S ++ RY G+L I++E+ ++ L+ VR FG+EGRK G ++I + +Y Sbjct: 4 YIGKTISLISVTDNRYVGLLEDIDSEKGTVTLKEVRCFGTEGRKNWGPEEIYPNPTVYNS 63 Query: 259 ILFRGSDIKDLQV 297 + F GS++KDL + Sbjct: 64 VKFNGSEVKDLSI 76
>FTSK_CHLMU (Q9PLI7) DNA translocase ftsK| Length = 794 Score = 30.4 bits (67), Expect = 2.6 Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 24/153 (15%) Frame = +1 Query: 91 SVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKD-----GQQIPAS----- 240 ++I L + E+RYE + + +GLRN++SF S R D ++IP Sbjct: 533 ALIWLVREMELRYEILRF--------LGLRNIQSFNSRTRNVDIEASYDKEIPEKMPFIV 584 Query: 241 ---DKIYEYILFRGSDIKDLQVKSSPPAQPASLHNDPA-----------IIQSHYPRXXX 378 D++ + +L DI+ V+ + A+ +H A +I++++P Sbjct: 585 GIIDELSDLLLSSSHDIETPIVRLAQMARAVGIHLILATQRPSRDVITGLIKANFPSRIA 644 Query: 379 XXXXXXXXXXXTIAEPTSQNVQSMVQMPPPSQG 477 I EP ++N+ M S G Sbjct: 645 FKVANKVNSQIIIDEPGAENLMGNGDMLVVSPG 677
>EATA_ECOLI (Q84GK0) Serine protease eatA precursor (EC 3.4.21.-) (Secreted| autotransporter protein eatA) (ETEC autotransporter A) Length = 1364 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +1 Query: 88 GSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIY 252 G+++S +K++ L T+N + S+ ++ FG G D +PAS+ + Sbjct: 519 GAIVSNNNKNKSELTLKLQTLNENDISVDVKTYEVFGGHGSPGDLYYVPASNTYF 573
>PBP1_YEAST (P53297) PAB1-binding protein 1| Length = 722 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +1 Query: 85 IGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDK-IYEYI 261 IGS +++T S ++Y G+L + N ES+ G+ V F + K + E + Sbjct: 60 IGSDVTVTVTSGVKYTGLLVSCNL-ESTNGIDVVLRFPRVADSGVSDSVDDLAKTLGETL 118 Query: 262 LFRGSDIKDLQVKS 303 L G D+ +L++K+ Sbjct: 119 LIHGEDVAELELKN 132
>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22| Length = 209 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = -1 Query: 278 SLPRKSIYSYILSLAGICWPSFLRPSL-PNERTFLSPMLDSSV---LMVYRTP 132 S PRK +SY+ LAG W SF +L P R + D+ + VY TP Sbjct: 70 SYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVYNTP 122
>SYFA_CARHZ (Q3ABT4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 340 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/60 (25%), Positives = 32/60 (53%) Frame = +1 Query: 76 ETYIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYE 255 + Y+G VI ++ +E++ V + E ++ L+N+++ E R + G +I K+ E Sbjct: 10 QKYLGEVIRVSDLNELQTVKVKFLGKKGEVTLALKNLKNLPPELRPEAGHKINTVKKLIE 69
>FTSK_CHLTR (O84744) DNA translocase ftsK| Length = 799 Score = 28.9 bits (63), Expect = 7.5 Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 24/153 (15%) Frame = +1 Query: 91 SVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKD---------GQQIP--- 234 ++I L + E+RYE + + +GLRN++SF S R D +++P Sbjct: 538 ALIWLVREMELRYEILRF--------LGLRNIQSFNSRTRNVDIEASYDKEISEKMPFIV 589 Query: 235 -ASDKIYEYILFRGSDIKDLQVKSSPPAQPASLHNDPA-----------IIQSHYPRXXX 378 D++ + +L DI+ V+ + A+ +H A +I++++P Sbjct: 590 GIIDELSDLLLSSSHDIETPIVRLAQMARAVGIHLILATQRPSRDVITGLIKANFPSRIA 649 Query: 379 XXXXXXXXXXXTIAEPTSQNVQSMVQMPPPSQG 477 I EP ++N+ M S G Sbjct: 650 FKVANKVNSQIIIDEPGAENLMGNGDMLVVSPG 682 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.129 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,244,956 Number of Sequences: 219361 Number of extensions: 1009647 Number of successful extensions: 2089 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2026 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2073 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
