Clone Name | bastl55d03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FUT4_BOVIN (Q8HZR3) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) ... | 30 | 3.2 | 2 | AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Pro... | 29 | 5.5 |
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>FUT4_BOVIN (Q8HZR3) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 398 Score = 30.0 bits (66), Expect = 3.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 269 PPFHLFLSTAHLMSTTILIYICW 337 P HL L A L+S+++ IY+CW Sbjct: 18 PGTHLALLAASLLSSSVAIYVCW 40
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 Query: 270 GSNDSSKADQEEEDKSPPPLSQIQISGDPP 181 GS+DS+ + + E K PPP S + PP Sbjct: 546 GSSDSATSQEHSESKDPPPKSSSKAPRAPP 575 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,449,417 Number of Sequences: 219361 Number of extensions: 1360286 Number of successful extensions: 3493 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3486 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)