Clone Name | bastl55d02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y930_TREPA (O83900) Hypothetical protein TP0930 | 28 | 4.5 |
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>Y930_TREPA (O83900) Hypothetical protein TP0930| Length = 573 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 175 SSHIQGNRQN*TIIRHCCCVRHSTH 249 +SH + Q II HCC RH TH Sbjct: 443 TSHTVSHAQACEIITHCCTRRHRTH 467 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,317,185 Number of Sequences: 219361 Number of extensions: 491003 Number of successful extensions: 1032 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1028 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1032 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)