Clone Information

BLAST Search Result

Clone Name	bastl55c06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LRC8E_MOUSE (Q66JT1) Leucine-rich repeat-containing protein 8E	40	0.004
2	LRC8E_RAT (Q3KRC6) Leucine-rich repeat-containing protein 8E	39	0.005
3	LRC8E_HUMAN (Q6NSJ5) Leucine-rich repeat-containing protein 8E	38	0.011
4	PGS1_XENLA (Q9IB75) Biglycan precursor	34	0.16
5	SUPT3_HUMAN (O75486) Transcription initiation protein SPT3 homol...	34	0.21
6	IAA1_ORYSA (Q5VRD1) Auxin-responsive protein IAA1 (Indoleacetic ...	33	0.27
7	RSU1_MOUSE (Q01730) Ras suppressor protein 1 (Rsu-1) (RSP-1)	33	0.27
8	RSU1_HUMAN (Q15404) Ras suppressor protein 1 (Rsu-1) (RSP-1)	33	0.27
9	GLNE_MYCPA (Q73YJ1) Glutamate-ammonia-ligase adenylyltransferase...	32	0.79
10	VIV_ORYSA (P37398) Protein viviparous homolog	32	1.0
11	MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (...	32	1.0
12	MET_MICMU (Q2QL89) Hepatocyte growth factor receptor precursor (...	31	1.3
13	MET_CALMO (Q2QLC0) Hepatocyte growth factor receptor precursor (...	31	1.3
14	SYL_MYCTU (P67510) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	31	1.8
15	SYL_MYCBO (P67511) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	31	1.8
16	LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein sme...	31	1.8
17	MET_PONPY (Q2IBD8) Hepatocyte growth factor receptor precursor (...	31	1.8
18	MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (...	31	1.8
19	MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (...	31	1.8
20	PGS1_SHEEP (O46390) Biglycan precursor (Bone/cartilage proteogly...	30	2.3
21	PGS1_RAT (P47853) Biglycan precursor (Bone/cartilage proteoglyca...	30	2.3
22	PGS1_MOUSE (P28653) Biglycan precursor (Bone/cartilage proteogly...	30	2.3
23	PGS1_CANFA (O02678) Biglycan precursor (Bone/cartilage proteogly...	30	2.3
24	PGS1_BOVIN (P21809) Biglycan precursor (Bone/cartilage proteogly...	30	2.3
25	SYL_MYCPA (Q744V3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	30	2.3
26	PGS1_HUMAN (P21810) Biglycan precursor (Bone/cartilage proteogly...	30	2.3
27	MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC...	30	2.3
28	MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (...	30	2.3
29	LRC57_XENLA (Q6INV3) Leucine-rich repeat-containing protein 57	30	3.0
30	GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase...	30	3.0
31	ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII...	30	3.0
32	LRC40_XENLA (Q6GPJ5) Leucine-rich repeat-containing protein 40	30	3.9
33	LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)	30	3.9
34	LRC8A_HUMAN (Q8IWT6) Leucine-rich repeat-containing protein 8A	29	5.1
35	SHOC2_MOUSE (O88520) Leucine-rich repeat protein SHOC-2 (Ras-bin...	29	5.1
36	SHOC2_HUMAN (Q9UQ13) Leucine-rich repeat protein SHOC-2 (Ras-bin...	29	5.1
37	PGS1_HORSE (O46403) Biglycan precursor (Bone/cartilage proteogly...	29	5.1
38	VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)	29	5.1
39	TAP_DROME (O16867) Basic helix-loop-helix neural transcription f...	29	5.1
40	ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Frag...	29	5.1
41	Y1553_MYCBO (P64870) Hypothetical protein Mb1553c	29	5.1
42	Y1526_MYCTU (P64869) Hypothetical protein Rv1526c/MT1577	29	5.1
43	YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5	29	5.1
44	RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)	29	5.1
45	DNL3_MOUSE (P97386) DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (...	29	5.1
46	INSM1_HUMAN (Q01101) Insulinoma-associated protein 1 (Zinc finge...	29	6.7
47	LRC8A_RAT (Q4V8I7) Leucine-rich repeat-containing protein 8A	29	6.7
48	LRC8A_MOUSE (Q80WG5) Leucine-rich repeat-containing protein 8A	29	6.7
49	RL10_BDEBA (Q6MJ05) 50S ribosomal protein L10	29	6.7
50	YHL1_EBV (P03181) Hypothetical protein BHLF1	29	6.7
51	GLNE_MYCTU (P69942) Glutamate-ammonia-ligase adenylyltransferase...	29	6.7
52	GLNE_MYCBO (P69941) Glutamate-ammonia-ligase adenylyltransferase...	29	6.7
53	GAS1_HUMAN (P54826) Growth-arrest-specific protein 1 precursor (...	28	8.7
54	SYL_NOCFA (Q5YN65) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	28	8.7
55	LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1	28	8.7
56	NIT2_NEUCR (P19212) Nitrogen catabolic enzyme regulatory protein	28	8.7
57	KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A...	28	8.7

>LRC8E_MOUSE (Q66JT1) Leucine-rich repeat-containing protein 8E|
          Length = 795

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 22/55 (40%), Positives = 29/55 (52%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSA 399
           +LY+  N    +P  +G+C G LR L    N +  LPPE G L  LQ L L  +A
Sbjct: 656 QLYLSHNKLETLPTQLGQCFG-LRLLDLSHNGLRSLPPELGLLQSLQHLALSYNA 709

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>LRC8E_RAT (Q3KRC6) Leucine-rich repeat-containing protein 8E|
          Length = 795

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 22/55 (40%), Positives = 29/55 (52%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSA 399
           +LY+  N    +P  +G+C G LR L    N +  LPPE G L  LQ L L  +A
Sbjct: 656 QLYLSHNKLETLPAQLGQCFG-LRLLDVSHNGLRSLPPELGLLQSLQHLALSYNA 709

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>LRC8E_HUMAN (Q6NSJ5) Leucine-rich repeat-containing protein 8E|
          Length = 796

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 22/55 (40%), Positives = 28/55 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSA 399
           +LY+  N    +P  +G C  GLR L    N +  LPPE G L  LQ L L  +A
Sbjct: 657 QLYLSYNKLETLPSQLGLC-SGLRLLDVSHNGLHSLPPEVGLLQNLQHLALSYNA 710

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>PGS1_XENLA (Q9IB75) Biglycan precursor|
          Length = 368

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    EAG  DGL+   L+VS  ++SG
Sbjct: 163 ELRIHENKIKKVPKGVFSGLKNMNCIEMGGNPLENGGIEAGAFDGLKLNYLRVSEAKLSG 222

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>SUPT3_HUMAN (O75486) Transcription initiation protein SPT3 homolog (SPT3-like|
           protein)
          Length = 399

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 2   LFPVHTLSPPPTPYETLGRAAAGSP 76
           L  +HTLSPPP P+ ++ RAAA  P
Sbjct: 35  LSTLHTLSPPPRPFPSVSRAAAQKP 59

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>IAA1_ORYSA (Q5VRD1) Auxin-responsive protein IAA1 (Indoleacetic acid-induced|
           protein 1)
          Length = 199

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = +1

Query: 97  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 222
           G+    AAPDPD     P  SDAAD A N+  LA  +  P A
Sbjct: 31  GSLAAAAAPDPDRKRSSPSSSDAADAADNSSPLAAAADAPPA 72

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>RSU1_MOUSE (Q01730) Ras suppressor protein 1 (Rsu-1) (RSP-1)|
          Length = 276

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +1

Query: 301 LRALKFFGNDVEVLPPEAGDLDGLQSLQLK----VSAPRVSG 414
           LRAL    ND E+LPP+ G L  LQ L L+    +S P+  G
Sbjct: 135 LRALYLSDNDFEILPPDIGKLTKLQILSLRDNDLISLPKEIG 176



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 238 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           LY+  N + ++P  IG+    L+ L    ND+  LP E G+L  L+ L ++
Sbjct: 138 LYLSDNDFEILPPDIGKLTK-LQILSLRDNDLISLPKEIGELTQLKELHIQ 187

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>RSU1_HUMAN (Q15404) Ras suppressor protein 1 (Rsu-1) (RSP-1)|
          Length = 276

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +1

Query: 301 LRALKFFGNDVEVLPPEAGDLDGLQSLQLK----VSAPRVSG 414
           LRAL    ND E+LPP+ G L  LQ L L+    +S P+  G
Sbjct: 135 LRALYLSDNDFEILPPDIGKLTKLQILSLRDNDLISLPKEIG 176



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 238 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           LY+  N + ++P  IG+    L+ L    ND+  LP E G+L  L+ L ++
Sbjct: 138 LYLSDNDFEILPPDIGKLTK-LQILSLRDNDLISLPKEIGELTQLKELHIQ 187

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>GLNE_MYCPA (Q73YJ1) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 998

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1

Query: 118 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 228
           APDPDGG+L  R    A +AG +W L+     PA  R
Sbjct: 554 APDPDGGLLAYRRLSEA-LAGESWYLSTLRDKPAVAR 589

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>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +1

Query: 91  DGGARMDPAAPDPD---GGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGGELY 243
           DG A  DP  P P    G   P  G +    A  +W       PPAA  G  +Y
Sbjct: 256 DGAASSDPQLPSPGANPGYEFPSGGQEMGSAAATSWMPYQAFTPPAAYGGDAMY 309

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>MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1381

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFVSGGSTITGIGKNLNSVSVPR 774

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>MET_MICMU (Q2QL89) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S PR
Sbjct: 750 PTKSFVSGGSTITGVGKNLNSVSVPR 775

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>MET_CALMO (Q2QLC0) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1381

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGIGKNLNSVSVPR 774

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>SYL_MYCTU (P67510) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 969

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 435 PHPAEHGPGDPGRGDLELQALE 370
           P PAEHGP DPG  DL +   E
Sbjct: 639 PRPAEHGPDDPGGVDLYVGGAE 660

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>SYL_MYCBO (P67511) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 969

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 435 PHPAEHGPGDPGRGDLELQALE 370
           P PAEHGP DPG  DL +   E
Sbjct: 639 PRPAEHGPDDPGGVDLYVGGAE 660

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>LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein smell-impaired)|
          Length = 1851

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +1

Query: 238 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQL 387
           L + RNA   +P  IG+C   L  L    N ++ LPPE G+   L  L +
Sbjct: 318 LNVDRNALEYLPLEIGQC-ANLGVLSLRDNKLKKLPPELGNCTVLHVLDV 366

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>MET_PONPY (Q2IBD8) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGVGKNLNSVSVPR 774

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>MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGVGKNLNSVSVPR 774

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>MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGVGKNLNSVSVPR 774

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>PGS1_SHEEP (O46390) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    E G  DGL+   L++S  +++G
Sbjct: 164 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 223

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>PGS1_RAT (P47853) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    E G  DGL+   L++S  +++G
Sbjct: 164 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 223

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>PGS1_MOUSE (P28653) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    E G  DGL+   L++S  +++G
Sbjct: 164 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 223

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>PGS1_CANFA (O02678) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    E G  DGL+   L++S  +++G
Sbjct: 164 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 223

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>PGS1_BOVIN (P21809) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
           (Leucine-rich PG I)
          Length = 369

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    E G  DGL+   L++S  +++G
Sbjct: 164 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 223

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>SYL_MYCPA (Q744V3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 969

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 435 PHPAEHGPGDPGRGDLELQALE 370
           P PAEHGP DPG  DL +   E
Sbjct: 637 PRPAEHGPQDPGGVDLYVGGAE 658

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>PGS1_HUMAN (P21810) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 368

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    E G  DGL+   L++S  +++G
Sbjct: 163 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 222

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>MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P++S  SGGST T + KNL+++S P+
Sbjct: 750 PTKSFISGGSTITGIGKNLNSVSTPK 775

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>MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSLPKNLSALSPPR 291
           P +S  SGGST T + KNL+++S PR
Sbjct: 750 PMKSFVSGGSTITGVGKNLNSVSVPR 775

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>LRC57_XENLA (Q6INV3) Leucine-rich repeat-containing protein 57|
          Length = 238

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 271 PRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQL 387
           P  +    G LR +    N +EV+PP  G    L+SL L
Sbjct: 30  PEDLQRLSGNLRTIDLSSNKIEVVPPMMGKFSLLKSLSL 68

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>GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 1004

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 118 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 228
           APDPDGG+L  R    A ++  TW L+     PA  R
Sbjct: 564 APDPDGGLLAYRRLSEA-LSAETWYLSTLRDKPAVAR 599

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>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2|
           (Elongin A2) (EloA2) (Transcription elongation factor B
           polypeptide 3B)
          Length = 753

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 453 LELPERPHPAEHGPGDPGRGDLELQALEPVQVPGLRGQ 340
           L +PE P PA  G   PGRG        P+  PG +GQ
Sbjct: 178 LRMPEGPEPAAPGK-QPGRGHTHAAQGGPLLCPGCQGQ 214

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>LRC40_XENLA (Q6GPJ5) Leucine-rich repeat-containing protein 40|
          Length = 605

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 253 NAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQL 387
           N   ++P+ I   +G L  L    ND+  LP   G L  L+SLQL
Sbjct: 299 NKLKVLPKEISLLKG-LERLDLSNNDIGSLPDTLGSLPNLKSLQL 342

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>LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)|
          Length = 1612

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           EL +  N    +P S+G+    L  L    N +EVLPPE G    L  L L+
Sbjct: 293 ELILTENLLTALPHSLGKLTK-LTNLNVDRNHLEVLPPEIGGCVALSVLSLR 343

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>LRC8A_HUMAN (Q8IWT6) Leucine-rich repeat-containing protein 8A|
          Length = 810

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 238 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           L I  N    +P  + +CR  LRAL    N ++ LP   G+L  L  ++L+
Sbjct: 713 LAITANRIETLPPELFQCRK-LRALHLGNNVLQSLPSRVGELTNLTQIELR 762

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>SHOC2_MOUSE (O88520) Leucine-rich repeat protein SHOC-2 (Ras-binding protein|
           Sur-8)
          Length = 582

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           ELY+Y N    +P  +G C   L  L    N +  LP    +L  L+ L L+
Sbjct: 127 ELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLR 177

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>SHOC2_HUMAN (Q9UQ13) Leucine-rich repeat protein SHOC-2 (Ras-binding protein|
           Sur-8)
          Length = 582

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           ELY+Y N    +P  +G C   L  L    N +  LP    +L  L+ L L+
Sbjct: 127 ELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLR 177

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>PGS1_HORSE (O46403) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 372

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +1

Query: 235 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLKVSAPRVSG 414
           EL I+ N    VP+ +      +  ++  GN +E    + G  DGL+   L++S  +++G
Sbjct: 167 ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFQPGAFDGLKLNYLRISEAKLTG 226

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>VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 382

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = +1

Query: 85  AADGGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPA 219
           AA  GA   P  P P  G  PP G  ++ V+  T   A   PPPA
Sbjct: 166 AASAGAPPPPPGPPPPPGPPPPPGLSSSGVSAATQG-AGGGPPPA 209

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>TAP_DROME (O16867) Basic helix-loop-helix neural transcription factor TAP|
           (Target of Poxn protein) (Protein biparous)
          Length = 398

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 145 PPRGSDAADVAGNTWDLAPFSPPPAALRG 231
           PP  +     +G TWD  P S PPA   G
Sbjct: 51  PPTPAIPQPYSGGTWDAVPLSSPPAGFVG 79

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>ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Fragment)|
          Length = 161

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/47 (38%), Positives = 18/47 (38%)
 Frame = +1

Query: 94  GGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGG 234
           GG    PA  D  GG  PP G D    A          PPPA   GG
Sbjct: 118 GGGSPPPAGGDGGGGAPPPAGGDGGGGA----------PPPAGGDGG 154

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>Y1553_MYCBO (P64870) Hypothetical protein Mb1553c|
          Length = 426

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -1

Query: 456 ELELPERPHPAEHGPGDPGRGDLELQALEPVQVPGLRGQHLD 331
           EL LP  P PA     +  RG  E+QA +PV  PGL  +  D
Sbjct: 181 ELGLPPAPAPAVRRLAE--RGAPEIQAYDPVFFPGLAAEWSD 220

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>Y1526_MYCTU (P64869) Hypothetical protein Rv1526c/MT1577|
          Length = 426

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -1

Query: 456 ELELPERPHPAEHGPGDPGRGDLELQALEPVQVPGLRGQHLD 331
           EL LP  P PA     +  RG  E+QA +PV  PGL  +  D
Sbjct: 181 ELGLPPAPAPAVRRLAE--RGAPEIQAYDPVFFPGLAAEWSD 220

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>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 100 ARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGG 234
           A   P+AP+P GG+  P  S  A VA     +A F  P  ++R G
Sbjct: 134 ASTTPSAPNPPGGLPAPSASATAAVAA---AVASFPSPDTSIRPG 175

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>RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)|
          Length = 297

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
 Frame = +1

Query: 94  GGARMDPAAPDPD--GGVLPPRGS--------DAADVAGNTWDLAPFSPPPAAL 225
           GGA    A PD    G V+ P  S        DA  +AG+ WD A   P P A+
Sbjct: 233 GGADQWNAIPDAQWGGDVVQPANSAVPAGTWTDAGPIAGDGWDAAAAPPVPGAV 286

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>DNL3_MOUSE (P97386) DNA ligase 3 (EC 6.5.1.1) (DNA ligase III)|
           (Polydeoxyribonucleotide synthase [ATP] 3)
          Length = 1015

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -2

Query: 368 PSRSPASGGSTSTSL--PKNLSALSP-PRHSPMERGTRL 261
           PS+S AS  +T   L  P +   + P P+HSPM+ G +L
Sbjct: 876 PSKSSASAKTTEQKLNSPSSRGGIKPIPKHSPMKPGEKL 914

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>INSM1_HUMAN (Q01101) Insulinoma-associated protein 1 (Zinc finger protein IA-1)|
          Length = 510

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 94  GGARMDPAAPDPDGGVLPP 150
           GGAR +P AP P  G LPP
Sbjct: 37  GGARAEPPAPSPVPGPLPP 55

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>LRC8A_RAT (Q4V8I7) Leucine-rich repeat-containing protein 8A|
          Length = 810

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 238 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           L +  N    +P  + +CR  LRAL    N ++ LP   G+L  L  ++L+
Sbjct: 713 LAVTANRIEALPPELFQCRK-LRALHLGNNVLQSLPSRVGELTNLTQIELR 762

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>LRC8A_MOUSE (Q80WG5) Leucine-rich repeat-containing protein 8A|
          Length = 810

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 238 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSLQLK 390
           L +  N    +P  + +CR  LRAL    N ++ LP   G+L  L  ++L+
Sbjct: 713 LAVTANRIEALPPELFQCRK-LRALHLGNNVLQSLPSRVGELTNLTQIELR 762

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>RL10_BDEBA (Q6MJ05) 50S ribosomal protein L10|
          Length = 182

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 262 NLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDG 369
           N +  S GE     +AL  F  DVEVL  ++G +DG
Sbjct: 87  NAIVFSYGEVNATAKALADFAKDVEVLQIKSGVMDG 122

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>YHL1_EBV (P03181) Hypothetical protein BHLF1|
          Length = 660

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +1

Query: 97  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 222
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 565 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 602



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +1

Query: 97  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 222
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 440 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 477



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +1

Query: 97  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 222
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 315 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 352



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +1

Query: 97  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 222
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 190 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 227

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>GLNE_MYCTU (P69942) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 994

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 118 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 228
           APDPDGG+L  R    A +A  +W LA     PA  +
Sbjct: 554 APDPDGGLLAYRRLSEA-LATESWYLATLRDKPAVAK 589

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>GLNE_MYCBO (P69941) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 994

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 118 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 228
           APDPDGG+L  R    A +A  +W LA     PA  +
Sbjct: 554 APDPDGGLLAYRRLSEA-LATESWYLATLRDKPAVAK 589

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>GAS1_HUMAN (P54826) Growth-arrest-specific protein 1 precursor (GAS-1)|
          Length = 345

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +1

Query: 94  GGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGGELYIYRNAY 261
           GGA  +    D DG   PPR    A  +G   DL P+ P   +  GG     R A+
Sbjct: 276 GGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDL-PYGPGRRSSGGGGRLAPRGAW 330

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>SYL_NOCFA (Q5YN65) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 950

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 435 PHPAEHGPGDPGRGDLELQALE 370
           P  AEHGP DPG  DL +  +E
Sbjct: 620 PRTAEHGPDDPGGVDLYVGGVE 641

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>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1|
          Length = 965

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 365 SRSPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR 249
           SR P     T  +LP  L+ L PP   P  +G+ + A R
Sbjct: 558 SRGPLDEDGTDEALPPPLAPLPPPPPPPARKGSYVSAFR 596

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>NIT2_NEUCR (P19212) Nitrogen catabolic enzyme regulatory protein|
          Length = 1036

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -2

Query: 371  SPSRSPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR*M*SSPPRSAAGGG 207
            SP+  PASGG+T+ S P +    S    S    G  +  +    S+PP+SA G G
Sbjct: 856  SPASGPASGGNTAGSTPTSYHG-STGSTSGAVGGKSVIPIA---SAPPKSAPGPG 906

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>KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5) (HK2)
           (HPCN1)
          Length = 613

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 456 ELELPERPHPA-EHGPGDPGRGDLELQAL 373
           EL  P RP P  E   GDPG G +E QAL
Sbjct: 84  ELPRPRRPPPEDEEEEGDPGLGTVEDQAL 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,124,210
Number of Sequences: 219361
Number of extensions: 861431
Number of successful extensions: 2844
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 2619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2831
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result