ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55b12 |
|---|---|
| Clone Library Name | barley_pub |
>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression| inhibition of growth A) Length = 1790 Score = 35.8 bits (81), Expect = 0.032 Identities = 19/48 (39%), Positives = 21/48 (43%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG 151 PP PP+H A P PPP A +P P PP P GL G Sbjct: 1020 PPPPPAHPGLSGAAPPPPPPPPPPPPGAGAAPPPPPPPPPPPPGGLGG 1067
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 35.8 bits (81), Expect = 0.032 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGK 181 G P PP+ A LA P PPP+ A S+ P P P G YG + L+G G+ Sbjct: 308 GVPPPPATPGAAPLAFP------PPPSQAAPDMSKPPTAQPDFPYGQYGYGQDLSGFGQ 360
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 33.1 bits (74), Expect = 0.21 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP-------ALPPSTPAGLYGQRRL 163 G PN P ++ A+ L S++ P A A + SP A+ PSTP+ L+ Q + Sbjct: 58 GKPNSPFSSQVALAAILLSSISSSPLALAVVDEPASPSVVIESQAVKPSTPSPLFIQNEI 117 Query: 164 LAGGGKAPGAQA 199 L KAP ++ Sbjct: 118 L----KAPSPKS 125
>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 699 Score = 32.7 bits (73), Expect = 0.27 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP---ALPPST 133 P +PP + PL +LT PPPA+A + PS SP A+P S+ Sbjct: 648 PTSPPPSLPQQGTTPPL-ALTAPPPAYATLGPSASPLDSAVPGSS 691
>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 32.7 bits (73), Expect = 0.27 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 3/63 (4%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKS---LTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGG 178 PP PPS + P S + PPP + P PALP S P+G L G Sbjct: 307 PPPPPSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPPPPPPLSMAGS 366 Query: 179 KAP 187 AP Sbjct: 367 TAP 369
>CN032_MACFA (Q4R837) Protein C14orf32 homolog| Length = 245 Score = 32.3 bits (72), Expect = 0.35 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 20 PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 P H+ A++ A+ PP + SP +P+ PPS P+GL Sbjct: 12 PEHSPAKTSAVSNTKPGQPPQGWPGSSPWNNPSAPPSVPSGL 53
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 32.3 bits (72), Expect = 0.35 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +2 Query: 8 PPNPPSHTRARSLALP-----LKSLTFPPPAFAHISPSRSPALPPSTPAG 142 PP PPS RA + A P S+ PPP + P PALP S P+G Sbjct: 310 PPPPPS--RAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSG 357 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG 151 PP PP + ++ P + +PPP A PS +P+ PP P + G Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPA--LPSSAPSGPPPPPPSVLG 367
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 32.0 bits (71), Expect = 0.46 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = +2 Query: 8 PPNPPSHTRARSL-ALP-----LKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 PP PP RS ALP ++ T P P + PS P+LPPS P L Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSL 439 Score = 30.8 bits (68), Expect = 1.0 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPP 127 PP PP A S+ LP + + PPP +PS PP Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)| Length = 942 Score = 31.6 bits (70), Expect = 0.60 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +3 Query: 147 MDSEDFLPEGGKLPELK 197 M+ +DF PEGGKLPE K Sbjct: 1 MEGDDFTPEGGKLPEFK 17
>SCNAA_RAT (P37089) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 698 Score = 31.6 bits (70), Expect = 0.60 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP 115 P +PP + + PL +LT PPPA+A + PS P Sbjct: 648 PTSPPPSLPQQGMTPPL-ALTAPPPAYATLGPSAPP 682
>Y2083_MYCTU (Q10691) Hypothetical protein Rv2083/MT2145| Length = 314 Score = 31.6 bits (70), Expect = 0.60 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPP-----PAFAHISPSRSPALPP 127 PP P S P KS T PP PA AH+ + P +PP Sbjct: 192 PPVPTSSPPTTPAGAPTKSATMPPPGGASPASAHMGAAGMPMVPP 236
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 31.2 bits (69), Expect = 0.78 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Frame = +2 Query: 17 PPSHTRARSLALPLKSLTFPPPAFAHISPSR------SPALPPSTPAGLYGQRRLLAGGG 178 PPSH LP S+ PPP H+ PSR SP + PS P YG G G Sbjct: 79 PPSHGH-----LP-PSVGGPPPHRGHLPPSRGFNPPPSPVISPSHPPPSYGAPPPSHGPG 132 Query: 179 KAP 187 P Sbjct: 133 HLP 135 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQ 154 P PP+ T + + P TF PP I P P TP YGQ Sbjct: 520 PRPPTPTYGQPPSPP----TFSPPPPRQIHSPPPPHWQPRTPTPTYGQ 563
>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| (Foocen) (Glut4 vesicle 20 kDa protein) Length = 1163 Score = 31.2 bits (69), Expect = 0.78 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = +2 Query: 74 PPPAFAHISPSRSPALPPSTPA 139 PPP A SP PA PPSTPA Sbjct: 141 PPPPPAGASPLAEPAAPPSTPA 162
>RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (Nuclear receptor coregulator 1) (Fragment) Length = 458 Score = 31.2 bits (69), Expect = 0.78 Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG--------QRRL 163 PP PP A +P L P P + S SP LPP P G G Sbjct: 35 PPGPPHTPSAPPPPMPPPPLGSPFPVIS--SSMGSPGLPPPAPPGFSGPVSSPQINSTVS 92 Query: 164 LAGGGKAP 187 L GGG P Sbjct: 93 LPGGGSGP 100
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 31.2 bits (69), Expect = 0.78 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Frame = +2 Query: 8 PPNPPSHTRARSLALPL------KSLTFPPPA---------FAHISPSRSPALPPSTPAG 142 P P S TR+ L P S T PPP SP+RSP LPP+ Sbjct: 311 PGLPESGTRSPGLLSPTFRPGIPSSQTVPPPLRKPPRSPSRSPSRSPNRSPCLPPAPEVA 370 Query: 143 LYGQRRLLAGGGKAP 187 L AG G+ P Sbjct: 371 LPKPVTQAAGSGRCP 385
>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1| precursor (Down syndrome cell adhesion molecule 2) Length = 2053 Score = 31.2 bits (69), Expect = 0.78 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFP-PPA-FAHISPSRSPALPPSTPA 139 G P+P + A + LP ++L P PPA A +P +PA PP+ P+ Sbjct: 1954 GLPHPGAPAAASTATLPQRTLAMPAPPAGTAPPAPGPTPAEPPTAPS 2000
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 30.8 bits (68), Expect = 1.0 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2 Query: 20 PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAP 187 P HT + + F P A + I ++P PPS P LY LA G +AP Sbjct: 2115 PDHTPLSNSTSTQQGSLFRPKA-SRIPTPQTPGNPPSQPGTLYRPPSSLAPGSRAP 2169
>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (MHC class I regulatory element-binding protein H-2RIIBP) Length = 520 Score = 30.8 bits (68), Expect = 1.0 Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG--------QRRL 163 PP PP A +P L P P + S SP LPP P G G Sbjct: 97 PPGPPLTPSAPPPPMPPPPLGSPFPVIS--SSMGSPGLPPPAPPGFSGPVSSPQINSTVS 154 Query: 164 LAGGGKAP 187 L GGG P Sbjct: 155 LPGGGSGP 162
>PACC_ASPPA (Q96UW0) pH-response transcription factor pacC/RIM101| Length = 662 Score = 30.8 bits (68), Expect = 1.0 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +2 Query: 14 NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLY--GQRRLLAGG 175 +PP H S+ L S T P A P+ S A PPST G++ RR GG Sbjct: 439 SPPHHEGGSSMYPRLPSATMPDSMTAGY-PTTSSAAPPSTLGGIFDHDDRRRYTGG 493
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPS 130 PP PPS + S A PL PP + PS SP +PPS Sbjct: 131 PPAPPSPSPP-SPAPPLPPSPAPPSPSPPVPPSPSPPVPPS 170
>SCNAA_HUMAN (P37088) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 669 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 8/42 (19%) Frame = +2 Query: 14 NPPSHTRARSLAL--------PLKSLTFPPPAFAHISPSRSP 115 +PPSH ++L P +LT PPPA+A + P SP Sbjct: 612 SPPSHFCPHPMSLSLSQPGPAPSPALTAPPPAYATLGPRPSP 653
>SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)| Length = 930 Score = 30.4 bits (67), Expect = 1.3 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA 184 G P+P H A L L + PP +P+R P+ G+ G RRL G +A Sbjct: 805 GGPSPRPHECASPLRLDV-----PPEGRCASAPARPALSAPAPRLGVGGGRRLPFSGHRA 859 Query: 185 PGA 193 P A Sbjct: 860 PPA 862
>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)| Length = 323 Score = 30.4 bits (67), Expect = 1.3 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTP-AGLYGQRRLLAGGGK 181 PP+PPS P S P P SP PA PP P A Y Q + GGGK Sbjct: 163 PPSPPSPPPPSPPPPPPPSPPPPSPPPPSPSPPPPPASPPPPPPALPYPQCGIKKGGGK 221
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +2 Query: 77 PPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA--PGAQ 196 PPAF P +PA P P L G GGG A PGA+ Sbjct: 446 PPAFYGAKPPTAPATPAPGPEPLGGPEPADGGGGGAAGPGAE 487
>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| Length = 1162 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +2 Query: 77 PPAFAHISPSRSPALPPSTPA 139 PPA A SP PA PPSTPA Sbjct: 138 PPAPAGASPLAEPAAPPSTPA 158
>PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 205 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +2 Query: 14 NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 +P + R +LA+P S P P FA + +PA PP+ PA Sbjct: 20 SPSAKPRPATLAMP-SSARGPAPLFAAAPDTPAPAAPPAEPA 60
>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)| (P-Frk) Length = 375 Score = 30.0 bits (66), Expect = 1.7 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSP--ALPPSTPA 139 PP PP H A L + PPPA H + P L P++PA Sbjct: 282 PPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPA 327
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 30.0 bits (66), Expect = 1.7 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Frame = +2 Query: 8 PPNPPSHTRARSLALP------LKSLTFPPPAFAHISPSRSPALPPSTP 136 PP PPS +LP + SL PPPAF + P PP P Sbjct: 546 PPPPPSFVSHGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPPPPPPPP 594
>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog| Length = 240 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 P N P+ T A S P + PP + +P +P+ PP+ P+GL Sbjct: 12 PENSPAKTSAVSNTKPGQ----PPQGWPGSNPWNNPSAPPAVPSGL 53
>KPC2_DROME (P13677) Protein kinase C, eye isozyme (EC 2.7.11.13) (PKC)| (dPKC53E(EY)) (Protein INAC) (Inactivation no after-potential C protein) (Photoreceptor-specific PKC) (Eye-PKC) Length = 700 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 83 AFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 190 A A ++ + LPPS P+ G + AG GK PG Sbjct: 2 AAAAVATPGATVLPPSVPSAAPGAKAPAAGAGKGPG 37
>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 30.0 bits (66), Expect = 1.7 Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 19/79 (24%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPA----------FAHISPSR-SPALPPSTPAGLYG- 151 PP+PP S A L PPP F IS S SP LPP P G G Sbjct: 97 PPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGP 156 Query: 152 -------QRRLLAGGGKAP 187 L GGG P Sbjct: 157 VSSPQINSTVSLPGGGSGP 175
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 30.0 bits (66), Expect = 1.7 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 14/60 (23%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLT--------------FPPPAFAHISPSRSPALPPSTPAG 142 GPP PP+ R P ++ T PPP + P PALP S P+G Sbjct: 295 GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSG 354
>G7C_MOUSE (Q9JHA8) Protein G7c precursor| Length = 891 Score = 29.6 bits (65), Expect = 2.3 Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = +2 Query: 17 PPSHTRARSLALPLKS---LTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKA 184 PP+H R L L S L P + A + P SPAL PST L Q R AGGG A Sbjct: 818 PPTHAFLRLLVLAQSSKDQLDGPAHSAAPVLPPVSPALLPST---LVTQGR--AGGGMA 871
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Frame = +2 Query: 11 PNPPSHTRARSLAL-----PLKSLTFPPPAFAHISPSRSPALPPSTPA 139 P+PP T L P+ + T PPP P+ +P+ P +TP+ Sbjct: 1438 PSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPS 1485
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 29.6 bits (65), Expect = 2.3 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPS-TPAGLYGQRRLLAGGGK 181 P P RARS + P L+ PPP A P P PP+ P G RR G + Sbjct: 104 PRPRPQPRARSRSQP--GLSAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSR 159
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 PPN S + + + + + P AH SPS A PP+ P GL Sbjct: 174 PPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAAPPAGPTGL 219
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 29.6 bits (65), Expect = 2.3 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKS---LTFPPPAFAHISPSRSPALPPSTPAG 142 PP PPS + P S + PPP + P PALP S P+G Sbjct: 310 PPPPPSRAPTAAPPPPPPSRPGVGAPPPPPNRMYPPPLPALPSSAPSG 357 Score = 28.5 bits (62), Expect = 5.1 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +2 Query: 8 PPNPPSHTRARSL-ALPLKSLTFPPPAFAHISPSRSPALPPSTP 136 PP PP+ L ALP + + PPP +S S S A PP P Sbjct: 335 PPPPPNRMYPPPLPALPSSAPSGPPPPPPPLSVSGSVAPPPPPP 378
>NUC1_NEUCR (P20824) Phosphorus acquisition-controlling protein| Length = 823 Score = 29.6 bits (65), Expect = 2.3 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFP--PPAFAHISPSRSPALPP 127 G P PPS A+ LALP +L+ P P AH S R+P L P Sbjct: 549 GLPPPPSPAVAKPLALPSAALSSPQLKPDSAH-SLKRTPQLAP 590
>EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)| Length = 626 Score = 29.3 bits (64), Expect = 3.0 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +2 Query: 2 KGPPNPPSHTRARSLALPLKSLTFPPP--AFAHISP-SRSPALPP 127 +GP +PP R SL L PPP + + P S SP PP Sbjct: 28 RGPDSPPKRPRPNSLPLTTTFRPLPPPPQTTSAVDPSSHSPVNPP 72
>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog| Length = 319 Score = 29.3 bits (64), Expect = 3.0 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 14 NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 NPPS + + P ++ PP + A P +P PP++PA Sbjct: 64 NPPSPPTSPAAPQPRENPPSPPTSPAAPQPRENPPSPPTSPA 105
>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 29.3 bits (64), Expect = 3.0 Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 19/79 (24%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPA----------FAHISPSR-SPALPPSTPAGLYG- 151 PP+PP S A L PPP F IS S SP LPP P G G Sbjct: 97 PPSPPGLPLPPSSAPTLGGSGAPPPPPMPPPQLGSPFPVISSSMGSPGLPPPAPPGFSGP 156 Query: 152 -------QRRLLAGGGKAP 187 L GGG P Sbjct: 157 VSSPQINSTVSLPGGGSGP 175
>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A| (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) Length = 1850 Score = 29.3 bits (64), Expect = 3.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 53 PLKSLTFPPPAFAHISPSRSPALP 124 P+ S PP F +SP+ SPALP Sbjct: 408 PVASSPVPPEVFVAVSPASSPALP 431
>FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (HFH-BF-2)| (CBF-2) (T-14-6) Length = 440 Score = 29.3 bits (64), Expect = 3.0 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAH-ISPSRSPALPPSTPAGLYGQRR------LL 166 PP PP R R+ LP L P + H + P+ + +L + P R + Sbjct: 323 PPPPPPPPRRRAPLLPAAELARTPFGYPHPLGPALAASLHAAKPGSGAAVARSPFSIESI 382 Query: 167 AGGGKAPGAQA 199 GGG PG A Sbjct: 383 IGGGPGPGLGA 393
>GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, subunit 2| precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2) (GABABR2) (G-protein coupled receptor 51) (HG20) Length = 941 Score = 29.3 bits (64), Expect = 3.0 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFP--PPA--FAHISPSRSPALPPSTPAGLYGQRRLLAG 172 GPP PP AR L L L L P P A +A +P P+ PP + GL + +A Sbjct: 11 GPPPPPPPPPARLLLLLLLPLLLPLAPGAWGWARGAPRPPPSSPPLSIMGLMPLTKEVAK 70 Query: 173 GGKAPG 190 G G Sbjct: 71 GSIGRG 76
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 28.9 bits (63), Expect = 3.9 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPP 127 PP+PPS + LPL TF P + + P P LPP Sbjct: 1780 PPSPPS------IPLPLPPPTFFPLSVSTSGPPTPPLLPP 1813
>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1853 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 P+ P++T + P F P ++ SP+ SP P TP+ Sbjct: 1754 PSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPS 1796
>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog| Length = 141 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = +2 Query: 14 NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 NPP T + P S+ PPP P A PP+ A Sbjct: 86 NPPQETPPPAAESPAPSVPTPPPTSTPAVPPADAAAPPAVAA 127
>GAG_AVISY (P03327) Gag polyprotein [Contains: Core protein p19; Core protein| p10] Length = 284 Score = 28.9 bits (63), Expect = 3.9 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = +2 Query: 2 KGPPNPPSHTRARSLAL-PLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGG 178 +G P + R L L P +S PPPA PS P LPP P R+ A G Sbjct: 201 RGAEQPRAEPRHTGLTLGPARSARLPPPA---PLPSSLPLLPPFPP-------RVAAVPG 250 Query: 179 KAPGA 193 A GA Sbjct: 251 GAGGA 255
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 28.9 bits (63), Expect = 3.9 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Frame = +2 Query: 8 PPNPPSHTRARSLAL----PLKSLTFPPPAFAHISPSRSPA-LPPSTP 136 PP PPS RS P +SL PP SPS SP+ P STP Sbjct: 136 PPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTP 183
>APA_MYCTU (Q50906) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (Immunogenic protein MPT32) (Antigen MPT-32) (45-kDa glycoprotein) (FAP-B) Length = 325 Score = 28.9 bits (63), Expect = 3.9 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 14 NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 NP A++LA ++ L PPPA P+ +PA P PA Sbjct: 269 NPVDKGAAKALAESIRPLVAPPPA-----PAPAPAEPAPAPA 305
>APA_MYCBO (O30620) Alanine and proline-rich secreted protein apa precursor| (Fibronectin attachment protein) (45/47 kDa antigen) (FAP-B) Length = 325 Score = 28.9 bits (63), Expect = 3.9 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 14 NPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 NP A++LA ++ L PPPA P+ +PA P PA Sbjct: 269 NPVDKGAAKALAESIRPLVAPPPA-----PAPAPAEPAPAPA 305
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 28.5 bits (62), Expect = 5.1 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Frame = +2 Query: 8 PPNP--PSHTRARSLALPLKSLTFPPPAFAHIS-----PSRSPALPPSTPAGLYGQRRLL 166 PP P PS A + A P + PPPA A ++ P+ P P+ P Q Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGS 308 Query: 167 AGGGKAPGAQA 199 AG AP A Sbjct: 309 AGAAPAPAPAA 319
>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)| Length = 1206 Score = 28.5 bits (62), Expect = 5.1 Identities = 17/46 (36%), Positives = 18/46 (39%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 PP PP LALP PPP P +P PP GL Sbjct: 705 PPPPPPPPLPNVLALPNSGGPPPPPPPPPPPPGLAPPPPPGLSFGL 750
>SYI_NATPD (Q3ITY7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1061 Score = 28.5 bits (62), Expect = 5.1 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -2 Query: 162 SLRCPYSPAGVEGGSAGDLLGEMCANAGGGKVRDFSGRAKLRAR 31 S+ CP P GV +AGD G+ +A + D + L +R Sbjct: 346 SVFCPVGPDGVYEDAAGDYAGQFVKDADAAIMDDLEAKGLLLSR 389
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 28.5 bits (62), Expect = 5.1 Identities = 17/46 (36%), Positives = 18/46 (39%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 PP PP LALP PPP P +P PP GL Sbjct: 931 PPPPPPPPLPNVLALPNSGGPPPPPPPPPPPPGLAPPPPPGLSFGL 976
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 28.5 bits (62), Expect = 5.1 Identities = 18/47 (38%), Positives = 19/47 (40%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYG 151 P PP + RS LP PPP P RS LPP P G Sbjct: 328 PTPPLPSPGRSGPLPPPPTERPPPP-VRDPPGRSGPLPPPPPINRNG 373
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 28.5 bits (62), Expect = 5.1 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Frame = +2 Query: 2 KGPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSR---------SPALPP 127 + P PP R RS +LP + PPP SP R SP+ PP Sbjct: 553 RSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPP 603
>LORI_HUMAN (P23490) Loricrin| Length = 316 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -2 Query: 165 RSLRCPYSPAGVEGGSAGDLLGEMCANAGGGKVRDFSGRAKLRARVCDGGFGG 7 ++++C GGS+G G + GGG V +SG C GG G Sbjct: 154 QAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGGGSGCGGGSSG 206
>HES2_MOUSE (O54792) Transcription factor HES-2 (Hairy and enhancer of split 2)| Length = 157 Score = 28.5 bits (62), Expect = 5.1 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 26 HTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLY 148 H R R+++ SLT PP +P+ SP +PP +GL+ Sbjct: 118 HLRQRTVSDDSPSLTLPPAP----APAPSPPVPPPGSSGLW 154
>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Rap1-GTP-interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic ac Length = 666 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 PP PP P + PPP++A I+ S P PP PA Sbjct: 569 PPPPPDFMEP-----PPDFVPPPPPSYAGIAGSELPPPPPPPPA 607
>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag| polyprotein) [Contains: Matrix protein; Capsid protein] Length = 469 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = +2 Query: 2 KGPPNPPSHTRARSLALPLKSLTFPPPAFAHISPS-RSPALPPSTPA 139 K P + P +LALP PPP P+ +P LPP+ P+ Sbjct: 114 KEPDSSPLSEPPEALALPPLPAALPPPYPGSSGPTPTAPPLPPTPPS 160
>CO8B_PAROL (Q9PVW7) Complement component C8 beta chain precursor (Complement| component 8 beta subunit) Length = 588 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -2 Query: 147 YSPAGVEGGSAGDLLGEMCAN-AGGGKVRDF 58 Y AG+EGGS LL EM + A G V DF Sbjct: 389 YVSAGIEGGSCNGLLNEMGEDTAIGSSVEDF 419
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +2 Query: 11 PNPPSHTRAR-SLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 P+P H A L P S T PP SP+ SP PP++PA Sbjct: 228 PHPHPHPSAVFHLRAPSSSSTAPP------SPATSPLSPPTSPA 265
>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 340 Score = 28.1 bits (61), Expect = 6.6 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +2 Query: 8 PPNPPSHT--RARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 PP P H + +P + + PPP A + P LPP+ P L Sbjct: 32 PPPAPGHFVYTGYPMFMPYRPVVLPPPPPALPQAALQPPLPPAPPPPL 79
>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)| Length = 520 Score = 28.1 bits (61), Expect = 6.6 Identities = 20/61 (32%), Positives = 24/61 (39%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAP 187 PP PP+ R+ PL PP P P P S PA ++GG AP Sbjct: 386 PPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPPTPVSGGSPAP 445 Query: 188 G 190 G Sbjct: 446 G 446
>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)| (Fragment) Length = 290 Score = 28.1 bits (61), Expect = 6.6 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFA---HISPSRSPALPPSTPA 139 PP PP T A PL PPP + + +P + PP PA Sbjct: 52 PPLPPPSTSPPPPASPLPPPVSPPPPLSPPPYPAPEKQEESPPLVPA 98
>RENT1_HUMAN (Q92900) Regulator of nonsense transcripts 1 (EC 3.6.1.-)| (ATP-dependent helicase RENT1) (Nonsense mRNA reducing factor 1) (NORF1) (Up-frameshift suppressor 1 homolog) (hUpf1) Length = 1129 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +2 Query: 20 PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQ 154 PSH A ++ +P + P P + + PA TP G G+ Sbjct: 984 PSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGTPKGKTGR 1028
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC| 2.7.11.1) Length = 1309 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAG 172 GPP P + R + ++P L PP P RSP+ P P RL G Sbjct: 1169 GPPRPKTGRRKSTSSIPPSPLACPP---ISAPPPRSPSPLPGHPPAPARSPRLRRG 1221
>UL56_HHV1E (P36297) Protein UL56| Length = 233 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Frame = +2 Query: 17 PPSHTRARSLALPLKSLTF--PPPAFAHISPSRSPALPPSTPAGLYG 151 PP R+L P + F PPP A + ALPPS P G G Sbjct: 44 PPRTHLHRTLLGPCRPCQFRQPPPERARRRSGAAHALPPSEPLGAPG 90
>CHIT_MANSE (P36362) Endochitinase precursor (EC 3.2.1.14)| Length = 554 Score = 28.1 bits (61), Expect = 6.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 56 LKSLTFPPPAFAHISPSRSPALPPSTPA 139 + S T PPP + +P+ A PPSTP+ Sbjct: 395 MSSYTVPPPHTENTTPTPEWARPPSTPS 422
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.1 bits (61), Expect = 6.6 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHI-SPSRSPALPPSTPAGLYGQRR 160 PP PP + L P+ + P A + SP R+P PPSTP L +RR Sbjct: 551 PPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPT-PPSTPVPLPEKRR 601
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 PP+P + A + FP A P S ALPP+TP GL Sbjct: 307 PPHPHPALESAWTAAAAAAAAFPGLA----PPPNSSALPPATPLGL 348
>K1C13_RAT (Q6IFV4) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)| (Keratin-13) (K13) (Type I keratin Ka13) Length = 438 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Frame = -2 Query: 132 VEGGSAGDLLGEMCANAGGGKVRDFSGR-AKLRARVCDGGFGGPF 1 V GGS+G G M GGG + G C GGFGG F Sbjct: 37 VTGGSSGGYGGGMSCGFGGGAGGGYGGGFGGGFGGSCGGGFGGGF 81
>CN032_PONPY (Q5R623) Protein C14orf32 homolog| Length = 245 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 20 PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 P H+ A++ A+ PP + +P +P+ P S P+GL Sbjct: 12 PEHSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVPSGL 53
>CN032_HUMAN (Q8NDC0) Protein C14orf32| Length = 245 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 20 PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGL 145 P H+ A++ A+ PP + +P +P+ P S P+GL Sbjct: 12 PEHSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVPSGL 53
>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing| protein 2 Length = 153 Score = 28.1 bits (61), Expect = 6.6 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = +2 Query: 17 PPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGG 175 PP+ + A P ++ PPA A S SPA P P GL Q A G Sbjct: 14 PPASRAPQMRAAPRRAPAAQPPAAAAPSAVGSPAAAPRQP-GLMAQMATTAAG 65
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1852 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 P+ P++T + P F P ++ SP+ SP P TP+ Sbjct: 1753 PSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPS 1795
>UBAX1_ARATH (Q7Y175) UBA and UBX domain-containing protein At4g15410| Length = 421 Score = 28.1 bits (61), Expect = 6.6 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQR 157 GPP PPS T A + + P+ SPSRS + PS+ A YG R Sbjct: 57 GPP-PPSSTIAGAQSPSQSHSPDYTPSETSPSPSRSRSASPSSRAAPYGLR 106
>K1C13_MOUSE (P08730) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)| (Keratin-13) (K13) (47 kDa cytokeratin) Length = 437 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = -2 Query: 132 VEGGSAGDLLGEMCANAGGGKVRDFSGRAKLRARVCDGGFGGPF 1 V GGSAG G M GGG F G GGFGG + Sbjct: 37 VTGGSAGGYGGGMSCGFGGGAGGGFGGG-------FGGGFGGSY 73
>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)| Length = 485 Score = 28.1 bits (61), Expect = 6.6 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTP 136 PP+PP R S P S PPP P P+ PP P Sbjct: 241 PPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPP 283
>GFI1_HUMAN (Q99684) Zinc finger protein Gfi-1 (Growth factor independence 1)| Length = 422 Score = 28.1 bits (61), Expect = 6.6 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = +2 Query: 113 PALPPSTPAGLYGQRRLLAGGGK-APGA 193 PA P PA LYG +R G G APG+ Sbjct: 157 PAPEPGHPAALYGPKRAAGGAGAGAPGS 184
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 28.1 bits (61), Expect = 6.6 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTF-PPPAFAHISPSRSPALPPSTPAGL 145 PP PP + R P+ + + PPP + PSR +PP P L Sbjct: 1200 PPPPPPYVNRRLKKPPMPAPSEKPPPIPSKPIPSRMSPIPPRKPPTL 1246
>ERC2_RAT (Q8K3M6) ERC protein 2 (CAZ-associated structural protein 1)| (CAST1) (Cast) (Cytomatrix protein p110) Length = 957 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 Query: 98 SPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 190 SPSRSP LP S G RR +GGG G Sbjct: 14 SPSRSPRLPRSP---RLGHRRTSSGGGGGTG 41
>ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1)| (CAST1) Length = 957 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 Query: 98 SPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 190 SPSRSP LP S G RR +GGG G Sbjct: 14 SPSRSPRLPRSP---RLGHRRTSSGGGGGTG 41
>ERC2_HUMAN (O15083) ERC protein 2| Length = 957 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 Query: 98 SPSRSPALPPSTPAGLYGQRRLLAGGGKAPG 190 SPSRSP LP S G RR +GGG G Sbjct: 14 SPSRSPRLPRSP---RLGHRRTSSGGGGGTG 41
>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3| Length = 950 Score = 27.7 bits (60), Expect = 8.6 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPS-RSPALPPSTPAGLYGQRRLLAGGGKA 184 P N TR R + S +F P+F PS R+ +P S L R + GGGKA Sbjct: 527 PSNKVIKTRYR-IVKKTPSSSFGAPSFPSSLPSWRARRIPLSRSLVLNRLRPAITGGGKA 585 Query: 185 P 187 P Sbjct: 586 P 586
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAG 142 PP PP T A P PPP + +P+ P PP AG Sbjct: 72 PPPPPPATAAPPPPPPP-----PPPPASAAAPASGPPAPPGLAAG 111
>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) Length = 1110 Score = 27.7 bits (60), Expect = 8.6 Identities = 12/39 (30%), Positives = 15/39 (38%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALP 124 PP PP + +P PPP + SP LP Sbjct: 590 PPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLP 628
>AB1IP_XENLA (Q6DCV1) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 653 Score = 27.7 bits (60), Expect = 8.6 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 7/50 (14%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTF-------PPPAFAHISPSRSPALPPSTP 136 PP PP A LP +F PPP + S +PA PP P Sbjct: 543 PPPPPDFFDAPPDFLPPSPPSFMSNAENPPPPPVTQLQMSNAPAPPPPPP 592
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 27.7 bits (60), Expect = 8.6 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 10/51 (19%) Frame = +2 Query: 11 PNPPSHTR------ARSLALPLKSLTFPP----PAFAHISPSRSPALPPST 133 P PP +R +RS LP + LT PP P + P R P+ PPST Sbjct: 121 PEPPRGSRRETRKPSRSTPLP-ELLTGPPAPNLPGPIAVEPGRRPSPPPST 170
>NELFA_MOUSE (Q8BG30) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 homolog) (mWHSC2) Length = 530 Score = 27.7 bits (60), Expect = 8.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 PP PPS +R P P F +P + L P+TPA Sbjct: 344 PPAPPSREASRPPEEPSAPSPTLPTQFKQRAPMYNSGLSPATPA 387
>MMP9_HUMAN (P14780) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) [Contains: 67 kDa matrix metalloproteinase-9; 82 kDa matrix metalloproteinase-9] Length = 707 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPST-PAG 142 P PP+ T + A P T PP P+ P PPS P G Sbjct: 451 PRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPTG 495
>GRP1_ARATH (P27483) Glycine-rich cell wall structural protein precursor| Length = 349 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/45 (40%), Positives = 18/45 (40%) Frame = -2 Query: 135 GVEGGSAGDLLGEMCANAGGGKVRDFSGRAKLRARVCDGGFGGPF 1 G GGS G G AGGG F G GGFGG F Sbjct: 310 GFGGGSGGGFGGGAGGGAGGGAGGGFGGGGG-----AGGGFGGGF 349
>ARHGB_HUMAN (O15085) Rho guanine nucleotide exchange factor 11 (PDZ-RhoGEF)| Length = 1522 Score = 27.7 bits (60), Expect = 8.6 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFA-HISPSRSPALPPSTPAGLYGQRRLLAGGGK 181 GPP T+A + + PP + H SP P S PAG + L GG Sbjct: 1346 GPPEVEGGTKATGNCFYVSMPSGPPDSSTDHSEAPMSPPQPDSLPAGQTEPQPQLQGGND 1405 Query: 182 AP 187 P Sbjct: 1406 DP 1407
>YAP1_MOUSE (P46938) 65 kDa Yes-associated protein (YAP65)| Length = 472 Score = 27.7 bits (60), Expect = 8.6 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 80 PAFAHISPSRSPALPPSTPAG 142 PA +SP+ +PA PP+ PAG Sbjct: 16 PAPPSVSPAGTPAAPPAPPAG 36
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +2 Query: 20 PSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAGGGKAP 187 P HT + + F P A +P ++P PPS + LY LA G +AP Sbjct: 2108 PDHTTVTNSTSTQQGSLFRPKASRTPTP-QNPPNPPSQQSTLYRPPSSLAPGSRAP 2162
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQ 154 GP P T AR A P + FP PA +P + PS P G G+ Sbjct: 757 GPNGPAGSTGARGDAGPSGATGFPGPAGRAGAPGPPGNVGPSGPTGHPGK 806
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 27.7 bits (60), Expect = 8.6 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = +2 Query: 2 KGPPNPPSH--TRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRRLLAG 172 KG P P T S + + PP A PS +P P+ PAGL GQ + G Sbjct: 802 KGEPGAPGRVMTAEGSSTITVPGPPGPPGAMGPPGPSGTPG--PAGPAGLPGQTKAQRG 858
>CCD95_HUMAN (Q8NBZ0) Coiled-coil domain-containing protein 95| Length = 244 Score = 27.7 bits (60), Expect = 8.6 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +2 Query: 5 GPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALP 124 G P+P S + S PL++ P P + ++ SR P P Sbjct: 103 GAPSPSSLSLPPSTGFPLQASGVPSPYLSSLASSRYPPFP 142
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPA---FAHISPSRSPALPPSTPA 139 P PP+ T + P K PPPA PS SP PP +PA Sbjct: 34 PKPPPAPTPSPCPPQPPKPQPKPPPAPGPSPKPGPSPSPPKPPPSPA 80
>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) Length = 1098 Score = 27.7 bits (60), Expect = 8.6 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = +2 Query: 8 PPNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTPA 139 P PP R + P+ S+ PPP P P P TPA Sbjct: 88 PMGPPHLQRPPFMPPPMSSM--PPPPGMMFPPGMPPVTAPGTPA 129
>FRAT2_MOUSE (Q8K025) GSK-3-binding protein FRAT2 (Frat-2)| Length = 231 Score = 27.7 bits (60), Expect = 8.6 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Frame = +2 Query: 5 GPPNPPSHTRA--------RSLALPLKSLTFPPPAFAHISPSRSPALPPSTPAGLYGQRR 160 G P PP R R + P P A A P R LP S + QRR Sbjct: 101 GDPAPPGAVRCVLGERGRVRGRSAPYCVAEIAPGASALPGPGRRGWLPGSVASHRIQQRR 160 Query: 161 LLAGGGKA 184 AGG +A Sbjct: 161 WTAGGARA 168
>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3| Length = 1580 Score = 27.7 bits (60), Expect = 8.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTP 136 P PP H + + P T+P F ISP R+PA +P Sbjct: 152 PIPPLHMTSALSSSP----TYPDLPFIRISPHRNPAAASESP 189
>GLI3_HUMAN (P10071) Zinc finger protein GLI3| Length = 1580 Score = 27.7 bits (60), Expect = 8.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 11 PNPPSHTRARSLALPLKSLTFPPPAFAHISPSRSPALPPSTP 136 P PP H + + P T+P F ISP R+PA +P Sbjct: 152 PIPPLHMTSALSSSP----TYPDLPFIRISPHRNPAAASESP 189
>CD2AP_MOUSE (Q9JLQ0) CD2-associated protein (Mesenchym-to-epithelium transition| protein with SH3 domains 1) (METS-1) Length = 637 Score = 27.7 bits (60), Expect = 8.6 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = +2 Query: 2 KGPPNPPSHTRARSLALPLKSLTFPPPAFAHISPSR--SPALPPSTPAGLYGQRRLLAGG 175 KGP P + A A PLK+ + PS+ +P +PP P LL Sbjct: 346 KGPAPKPDLSAAEKKAFPLKAEEKDEKSLLEQKPSKPAAPQVPPKKPTAPTKASNLL--- 402 Query: 176 GKAPGA 193 ++PGA Sbjct: 403 -RSPGA 407 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,201,374 Number of Sequences: 219361 Number of extensions: 661967 Number of successful extensions: 4211 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 3428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4119 length of database: 80,573,946 effective HSP length: 41 effective length of database: 71,580,145 effective search space used: 1717923480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
