Clone Name | bastl55b10 |
---|---|
Clone Library Name | barley_pub |
>gb|AY111501.1| Zea mays CL31834_1 mRNA sequence Length = 621 Score = 69.9 bits (35), Expect = 5e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 239 catgcctgcgttccacgcgtacggagatggcgggtgcctcgtctctgccccggccgagct 298 |||||||||| || |||| |||||||||| ||||||||||||||| || ||||| ||||| Sbjct: 407 catgcctgcgctctacgcttacggagatgacgggtgcctcgtctcggcgccggctgagct 348 Query: 299 ttccgggatgttctgccgcggcg 321 |||| | ||||||||||||| Sbjct: 347 ggccggactcttctgccgcggcg 325
>ref|XM_464514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2525 Score = 65.9 bits (33), Expect = 8e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 260 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 319 ||||||||| ||||| ||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 219 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 278 Query: 320 cggcg 324 ||||| Sbjct: 279 cggcg 283
>ref|XM_464515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2981 Score = 65.9 bits (33), Expect = 8e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 260 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 319 ||||||||| ||||| ||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 228 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 287 Query: 320 cggcg 324 ||||| Sbjct: 288 cggcg 292
>dbj|AK067705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116M10, full insert sequence Length = 2525 Score = 65.9 bits (33), Expect = 8e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 260 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 319 ||||||||| ||||| ||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 219 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 278 Query: 320 cggcg 324 ||||| Sbjct: 279 cggcg 283
>dbj|AK065056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J06, full insert sequence Length = 6528 Score = 65.9 bits (33), Expect = 8e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 260 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 319 ||||||||| ||||| ||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 225 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 284 Query: 320 cggcg 324 ||||| Sbjct: 285 cggcg 289
>dbj|AK064800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D06, full insert sequence Length = 2981 Score = 65.9 bits (33), Expect = 8e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 260 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 319 ||||||||| ||||| ||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 228 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 287 Query: 320 cggcg 324 ||||| Sbjct: 288 cggcg 292
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 263 agatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcggcgg 322 |||||| ||||| ||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 5630872 agatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcggcgg 5630813 Query: 323 cg 324 || Sbjct: 5630812 cg 5630811
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 263 agatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcggcgg 322 |||||| ||||| ||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 58608 agatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcggcgg 58549 Query: 323 cg 324 || Sbjct: 58548 cg 58547
>gb|AY702899.1| Tetraodon nigroviridis XK-related protein 2b (XRG2b) mRNA, complete cds Length = 2083 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 cctgctcttcttcttcttccaa 210 |||||||||||||||||||||| Sbjct: 895 cctgctcttcttcttcttccaa 916
>gb|AY702898.1| Tetraodon nigroviridis XK-related protein 2a (XRG2a) mRNA, complete cds Length = 1466 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 cctgctcttcttcttcttccaa 210 |||||||||||||||||||||| Sbjct: 866 cctgctcttcttcttcttccaa 887
>ref|NM_126078.1| Arabidopsis thaliana unknown protein AT5G66800 mRNA, complete cds Length = 960 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tcttcttcttcttccaaggga 214 ||||||||||||||||||||| Sbjct: 383 tcttcttcttcttccaaggga 403
>emb|AL591437.6| Human DNA sequence from clone RP13-223M5 on chromosome X, complete sequence Length = 39528 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttcc 208 ||||||||||||||||||||| Sbjct: 30422 tcctgctcttcttcttcttcc 30442
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tcttcttcttcttccaaggga 214 ||||||||||||||||||||| Sbjct: 361049 tcttcttcttcttccaaggga 361069
>gb|AY183459.1| Lupinus angustifolius putative pectin methylesterase mRNA, complete cds Length = 1112 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ttccaagggatcccatccttc 225 ||||||||||||||||||||| Sbjct: 808 ttccaagggatcccatccttc 788
>gb|AY209001.1| Lupinus angustifolius pectin methylesterase mRNA, complete cds Length = 1111 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ttccaagggatcccatccttc 225 ||||||||||||||||||||| Sbjct: 808 ttccaagggatcccatccttc 788
>gb|AC007220.4|AC007220 Homo sapiens chromosome 16 clone RP11-396B14, complete sequence Length = 172945 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttcc 208 ||||||||||||||||||||| Sbjct: 107215 tcctgctcttcttcttcttcc 107235
>gb|AY084283.1| Arabidopsis thaliana clone 102248 mRNA, complete sequence Length = 960 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tcttcttcttcttccaaggga 214 ||||||||||||||||||||| Sbjct: 383 tcttcttcttcttccaaggga 403
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tcttcttcttcttccaaggga 214 ||||||||||||||||||||| Sbjct: 109648 tcttcttcttcttccaaggga 109668
>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21 Length = 69850 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tcttcttcttcttccaaggga 214 ||||||||||||||||||||| Sbjct: 14283 tcttcttcttcttccaaggga 14303
>emb|AL844576.9| Mouse DNA sequence from clone RP23-233M15 on chromosome 2, complete sequence Length = 114285 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttcc 208 ||||||||||||||||||||| Sbjct: 110293 tcctgctcttcttcttcttcc 110273
>ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 cgggatgttctgccgcggcggcgg 325 ||||||||||||| |||||||||| Sbjct: 1140 cgggatgttctgcggcggcggcgg 1163
>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence Length = 209336 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 181936 tcctgctcttcttcttcttc 181955
>gb|AY534503.1| Blasicrura summersi cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|AY534501.1| Melicerona felina cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|AY534456.1| Pseudozonaria nigropunctata cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 487 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 125 tcctgctcttcttcttcttc 144
>ref|NM_001032710.1| Takifugu rubripes XK-related protein 2 (LOC497080), mRNA Length = 1747 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctgctcttcttcttcttcc 208 |||||||||||||||||||| Sbjct: 978 cctgctcttcttcttcttcc 997
>gb|DQ483819.1| Gymnogyps californianus clone 242F microsatellite sequence Length = 551 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 397 tcctgctcttcttcttcttc 378
>gb|DQ483551.1| Gymnogyps californianus clone 110D microsatellite sequence Length = 579 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 398 tcctgctcttcttcttcttc 379
>gb|DQ483980.1| Gymnogyps californianus clone 146G microsatellite sequence Length = 558 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 162 tcctgctcttcttcttcttc 181
>gb|DQ483424.1| Gymnogyps californianus clone 127H microsatellite sequence Length = 1202 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 158 tcctgctcttcttcttcttc 177
>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence Length = 210148 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 100904 tcctgctcttcttcttcttc 100885
>gb|AC117204.3| Mus musculus BAC clone RP23-256L23 from 18, complete sequence Length = 183065 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 88545 tcctgctcttcttcttcttc 88526
>gb|AC101659.12| Mus musculus chromosome 7, clone RP23-202M11, complete sequence Length = 244819 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 72954 tcctgctcttcttcttcttc 72935
>emb|AL589765.19| Human DNA sequence from clone RP11-98D18 on chromosome 1 Contains the 3' end of the SNX27 gene for sorting nexin family member 27, the TNRC4 gene for trinucleotide repeat containing 4, five novel genes, a ribosomal protein S11 (RPS11) pseudogene, the MRPL9 gene for mitochondrial ribosomal protein L9, the OAZ3 gene for ornithine decarboxylase antizyme 3, a novel gene (FLJ36032) the TDRKH gene for tudor and KH domain containing, the RORC gene for RAR-related orphan receptor C and four CpG islands, complete sequence Length = 163389 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ttccaagggatcccatcctt 224 |||||||||||||||||||| Sbjct: 86254 ttccaagggatcccatcctt 86235
>gb|AY161830.1| Eclogavena dayritiana isolate BJLinnSoc_218 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|AY161829.1| Blasicrura interrupta isolate BJLinnSoc_217 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 612 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 250 tcctgctcttcttcttcttc 269
>gb|AY161828.1| Blasicrura pallidula pallidula isolate BJLinnSoc_216 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12 on chromosome 6p22.2-22.3, complete sequence Length = 175555 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 15101 tcctgctcttcttcttcttc 15082
>dbj|AK125876.1| Homo sapiens cDNA FLJ43888 fis, clone TESTI4009306, moderately similar to Homo sapiens ornithine decarboxylase antizyme 3 (OAZ3) Length = 3786 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ttccaagggatcccatcctt 224 |||||||||||||||||||| Sbjct: 300 ttccaagggatcccatcctt 281
>gb|AC005396.3| Arabidopsis thaliana chromosome 2 clone T26I20 map mi398, complete sequence Length = 85214 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctcttcttcttcttccaagg 212 |||||||||||||||||||| Sbjct: 34713 ctcttcttcttcttccaagg 34694
>emb|BX276126.11| Zebrafish DNA sequence from clone CH211-232L22 in linkage group 17, complete sequence Length = 92365 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 81484 tcctgctcttcttcttcttc 81465
>gb|AY613954.1| Takifugu rubripes XK-related protein 2b mRNA, complete cds Length = 2171 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctgctcttcttcttcttcc 208 |||||||||||||||||||| Sbjct: 905 cctgctcttcttcttcttcc 924
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 123304 tcctgctcttcttcttcttc 123285
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 cgggatgttctgccgcggcggcgg 325 ||||||||||||| |||||||||| Sbjct: 18605239 cgggatgttctgcggcggcggcgg 18605216
>gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, complete cds Length = 71512 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttccaag 211 |||| ||||||||||||||||||| Sbjct: 43099 tcctcctcttcttcttcttccaag 43076
>dbj|AB125312.1| Nannochloris bacillaris genes for hypothetical protein, DNA helicase RecG, thioredoxin-like protein, and NbrbcS1-1 gene for ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit, partial and complete cds Length = 11769 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 111 tcctgctcttcttcttcttc 130
>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 195667 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttccaag 211 |||| ||||||||||||||||||| Sbjct: 153429 tcctcctcttcttcttcttccaag 153406
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 cgggatgttctgccgcggcggcgg 325 ||||||||||||| |||||||||| Sbjct: 30293 cgggatgttctgcggcggcggcgg 30270
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 cgggatgttctgccgcggcggcgg 325 ||||||||||||| |||||||||| Sbjct: 57781 cgggatgttctgcggcggcggcgg 57758
>gb|AY534265.1| Takifugu rubripes XK-related protein 2 mRNA, complete cds Length = 1747 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctgctcttcttcttcttcc 208 |||||||||||||||||||| Sbjct: 978 cctgctcttcttcttcttcc 997
>gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228734 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 73130 tcctgctcttcttcttcttc 73149
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 123304 tcctgctcttcttcttcttc 123285
>gb|DQ207319.1| Blasicrura interrupta haplotype SriLanka_1859 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 602 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 240 tcctgctcttcttcttcttc 259
>gb|DQ207318.1| Blasicrura interrupta haplotype Phuk_1481 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|DQ207317.1| Blasicrura summersi haplotype 2126 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|DQ207315.1| Blasicrura pallidula pallidula haplotype NJava_1496 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|DQ207311.1| Eclogavena dayritiana haplotype 1541 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|DQ207310.1| Eclogavena luchuana haplotype Okinawa_2758 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|DQ207302.1| Melicerona felina haplotype Zanz_1197 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>gb|DQ207301.1| Melicerona felina haplotype Masirah_1738 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 252 tcctgctcttcttcttcttc 271
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 123304 tcctgctcttcttcttcttc 123285
>gb|AC140983.4| Mus musculus BAC clone RP23-167M17 from 18, complete sequence Length = 193004 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 41670 tcctgctcttcttcttcttc 41689
>gb|U51918.1|PSU51918 Pisum sativum mitochondrial pyruvate dehydrogenase E1 alpha subunit mRNA, complete cds Length = 1630 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 tcttcttcttcttccaagggatcc 217 ||||||||||||||||| |||||| Sbjct: 251 tcttcttcttcttccaacggatcc 274
>emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chromosome 4, complete sequence Length = 210306 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 185501 tcctgctcttcttcttcttc 185520
>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete sequence Length = 239847 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcctgctcttcttcttcttccaag 211 |||| ||||||||||||||||||| Sbjct: 187745 tcctcctcttcttcttcttccaag 187722
>emb|AL671190.10| Mouse DNA sequence from clone RP23-464L12 on chromosome 4, complete sequence Length = 180239 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcctgctcttcttcttcttc 207 |||||||||||||||||||| Sbjct: 81201 tcctgctcttcttcttcttc 81220 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,775,809 Number of Sequences: 3902068 Number of extensions: 2775809 Number of successful extensions: 619436 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 618504 Number of HSP's gapped (non-prelim): 932 length of query: 355 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 333 effective length of database: 17,147,199,772 effective search space: 5710017524076 effective search space used: 5710017524076 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)