Clone Name | bastl55b06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY245454.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 1 mRNA, complete cds Length = 357 Score = 640 bits (323), Expect = 0.0 Identities = 326/327 (99%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccac 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccac 60 Query: 149 atggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgc 120 Query: 209 ggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggcc 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggcc 180 Query: 269 atcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgag 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgag 240 Query: 329 gcaatgccgaccttcctgtttatcaaggacggtgagaaggtggacagtgttgtcggtggc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gcaatgccgaccttcctgtttatcaaggacggtgagaaggtggacagtgttgtcggtggc 300 Query: 389 aggaaagatgacatccataccaagata 415 ||||| ||||||||||||||||||||| Sbjct: 301 aggaaggatgacatccataccaagata 327
>gb|AY072771.1| Triticum aestivum cultivar Soissons thioredoxin H mRNA, complete cds Length = 598 Score = 513 bits (259), Expect = e-142 Identities = 310/327 (94%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccac 148 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 1 atggccgccgaggagggagccgtgatagcgtgccacaccaagcaagagttcgacacccac 60 Query: 149 atggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgc 208 ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 61 atggctaatggcaaggagaccggcaagctggtgatcattgacttcactgcttcctggtgc 120 Query: 209 ggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggcc 268 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 121 ggtccttgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggcgcc 180 Query: 269 atcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgag 328 || |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 181 attttcctgaaggtggacgttgacgagctgaaggacgtcgctgaagcatacaacgttgag 240 Query: 329 gcaatgccgaccttcctgtttatcaaggacggtgagaaggtggacagtgttgtcggtggc 388 ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 241 gcaatgccgaccttcctgtttatcaaggatggtgcgaaggtggacactgttgtcggtggc 300 Query: 389 aggaaagatgacatccataccaagata 415 ||||| ||||| ||||||||||||||| Sbjct: 301 aggaaggatgatatccataccaagata 327
>ref|XM_476912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 93 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 152 Query: 148 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 207 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 153 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 212 Query: 208 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 267 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 213 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 272 Query: 268 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 327 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 273 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 332 Query: 328 ggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||||||||||||| || |||||||| |||| Sbjct: 333 ggcaatgccgaccttcctattcatcaaggatggtg 367
>dbj|AK121423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N23, full insert sequence Length = 733 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 94 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 153 Query: 148 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 207 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 154 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 213 Query: 208 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 267 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 214 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 273 Query: 268 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 327 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 274 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 333 Query: 328 ggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||||||||||||| || |||||||| |||| Sbjct: 334 ggcaatgccgaccttcctattcatcaaggatggtg 368
>dbj|AK059196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A03, full insert sequence Length = 600 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 93 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 152 Query: 148 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 207 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 153 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 212 Query: 208 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 267 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 213 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 272 Query: 268 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 327 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 273 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 332 Query: 328 ggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||||||||||||| || |||||||| |||| Sbjct: 333 ggcaatgccgaccttcctattcatcaaggatggtg 367
>dbj|D21836.1|RICTH Oryza sativa (japonica cultivar-group) mRNA for thioredoxin h, complete cds Length = 687 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 56 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 115 Query: 148 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 207 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 116 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 175 Query: 208 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 267 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 176 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 235 Query: 268 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 327 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 236 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 295 Query: 328 ggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||||||||||||| || |||||||| |||| Sbjct: 296 ggcaatgccgaccttcctattcatcaaggatggtg 330
>gb|U92541.1|OSU92541 Oryza sativa thioredoxin h mRNA, complete cds Length = 601 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 85 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 144 Query: 148 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 207 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 145 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 204 Query: 208 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 267 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 205 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 264 Query: 268 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 327 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 265 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 324 Query: 328 ggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||||||||||||| || |||||||| |||| Sbjct: 325 ggcaatgccgaccttcctattcatcaaggatggtg 359
>dbj|D21310.1|RICSS396 Oryza sativa SS396 mRNA for thioredoxin, partial sequence Length = 320 Score = 151 bits (76), Expect = 2e-33 Identities = 148/172 (86%) Strand = Plus / Plus Query: 191 ttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgagtacgcc 250 ||||||||||||||||| || || || || |||| |||||||| || ||||| |||||| Sbjct: 21 ttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaatacgcc 80 Query: 251 aagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaaggacgtcgct 310 || ||||||||||| || ||||||||||||| |||||||||||||||||||| || ||| Sbjct: 81 aaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaaggaagttgct 140 Query: 311 gaagcatacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 362 ||| |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 141 gaaaagtacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 185 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 244 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 4607092 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 4607033 Query: 245 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 302 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 4607032 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 4606975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 4608289 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 4608230 Query: 148 catggccaatggcaaggacaccggcaa 174 ||| |||| | |||||| ||||||| Sbjct: 4608229 gatgaccaaggccaaggaggccggcaa 4608203 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 317 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 4606879 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 4606834
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 185 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 244 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 72432 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 72373 Query: 245 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 302 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 72372 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 72315 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 73629 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 73570 Query: 148 catggccaatggcaaggacaccggcaa 174 ||| |||| | |||||| ||||||| Sbjct: 73569 gatgaccaaggccaaggaggccggcaa 73543 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 317 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 72219 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 72174
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 185 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 244 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 14465 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 14406 Query: 245 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 302 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 14405 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 14348 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 15662 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 15603 Query: 148 catggccaatggcaaggacaccggcaa 174 ||| |||| | |||||| ||||||| Sbjct: 15602 gatgaccaaggccaaggaggccggcaa 15576 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 317 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 14252 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 14207
>dbj|D26547.1|RICRTH Oryza sativa gene for thioredoxin h, complete cds Length = 2906 Score = 107 bits (54), Expect = 3e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 185 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 244 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 2217 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 2276 Query: 245 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 302 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 2277 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 2334 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 147 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 1025 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 1084 Query: 148 catggccaatggcaaggacaccggcaa 174 ||| |||| | |||||| ||||||| Sbjct: 1085 gatgaccaaggccaaggaggccggcaa 1111 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 317 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 362 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 2430 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 2475
>gb|AY104876.1| Zea mays PCO064560 mRNA sequence Length = 756 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Plus Query: 96 ccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccacatggcca 155 ||||| |||||| ||| ||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 119 ccgagcagggagtcgtgatcgcgtgccacagcaaggctgagtttgacgcccacatgacca 178 Query: 156 atggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgcggtccat 215 | | | |||| |||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 179 aggcccaggaagccggcaagctggtggtcattgacttcactgccgcctggtgcggtccat 238 Query: 216 gtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggccatcttcc 275 | || | ||| |||||| | || | || |||||||||||||| || || | |||||| Sbjct: 239 gccgcgccatcgccccactgttcgtcgaacacgccaagaagttcactcaggtcgtcttcc 298 Query: 276 tgaaggtgga 285 |||||||||| Sbjct: 299 tgaaggtgga 308
>gb|BT017986.1| Zea mays clone EL01N0525F08.c mRNA sequence Length = 687 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 96 ccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccacatggcca 155 ||||| |||||| ||| ||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 63 ccgagcagggagtcgtgatcgcgtgccacagcaaggctgagtttgacgcccacattacca 122 Query: 156 atggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgcggtccat 215 | | | |||| |||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 123 aggcccaggaagccggcaagctggtggtcattgacttcactgccgcctggtgcggtccat 182 Query: 216 gtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggccatcttcc 275 | || | ||| |||||| | || | || |||||||||||||| || || | | |||| Sbjct: 183 gccgcgccatcgccccactgttcgtcgaacacgccaagaagttcactcaggtcgtgttcc 242 Query: 276 tgaaggtgga 285 |||||||||| Sbjct: 243 tgaaggtgga 252
>emb|AJ890021.1| Zea mays mRNA for thioredoxin h2 protein (trxh2 gene), cultivar A69Y, from endosperm tissue Length = 556 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 96 ccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccacatggcca 155 ||||| |||||| ||| ||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 8 ccgagcagggagtcgtgatcgcgtgccacagcaaggctgagtttgacgcccacatgacca 67 Query: 156 atggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgcggtccat 215 | | | |||| |||||||||||||| |||| || |||||||| ||||||||||||||| Sbjct: 68 aggcccaggaagccggcaagctggtggtcatcgacttcactgccgcctggtgcggtccat 127 Query: 216 gtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggccatcttcc 275 | || | ||| |||||| | || | || |||||||||||||| || || | | |||| Sbjct: 128 gccgcgccatcgccccactgttcgtcgaacacgccaagaagttcactcaggtcgtgttcc 187 Query: 276 tgaaggtgga 285 |||||||||| Sbjct: 188 tgaaggtgga 197
>dbj|D87984.1| Fagopyrum esculentum mRNA for thioredoxin, complete cds Length = 595 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 281 gtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgaggcaatgccga 338 |||||||||||||| ||||||| |||||||| | |||||| || ||||||||||||| Sbjct: 275 gtggatgttgatgatttgaaggatgtcgctgaggaatacaaggtggaggcaatgccga 332
>gb|AY344230.1| Ipomoea batatas thioredoxin H3 mRNA, complete cds Length = 676 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 186 ttgatttcactgcttcctggtgcggtcc 213 |||||||||||||||||||||||||||| Sbjct: 219 ttgatttcactgcttcctggtgcggtcc 246
>gb|AY170650.1| Pisum sativum clone 3 thioredoxin h mRNA, complete cds Length = 665 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 186 ttgatttcactgcttcctggtgcggtccatg 216 |||||||||||||||| |||||||||||||| Sbjct: 168 ttgatttcactgcttcttggtgcggtccatg 198
>gb|AY335159.1| Fagopyrum tataricum thioredoxin mRNA, partial cds Length = 328 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 278 aaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgaggcaatgccg 337 ||||||||||||||||| || || |||||||| | |||||| || |||||||||||| Sbjct: 46 aaggtggatgttgatgattgtaatgatgtcgctgaggaatacaaagtggaggcaatgccg 105 Query: 338 acctt 342 ||||| Sbjct: 106 acctt 110
>gb|AF420472.2| Triticum aestivum thioredoxin H mRNA, complete cds Length = 547 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 173 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 232 ||||||||| | ||||| |||||||| || |||||||| ||||| || |||| || ||| Sbjct: 150 aagctggtggtgattgacttcactgcatcatggtgcggaccatgccgcatcatggctcca 209 Query: 233 gtctttgctgagtacgccaagaagttccc 261 | |||||||| ||||||||||||||| Sbjct: 210 atttttgctgatctcgccaagaagttccc 238
>gb|AY245455.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 2 mRNA, complete cds Length = 369 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 173 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 232 ||||||||| | ||||| |||||||| || |||||||| ||||| || |||| || ||| Sbjct: 103 aagctggtggtgattgacttcactgcatcatggtgcggaccatgccgcatcatggctcca 162 Query: 233 gtctttgctgagtacgccaagaagttccc 261 || || ||||| ||||||||||||||| Sbjct: 163 gttttcgctgatctcgccaagaagttccc 191
>emb|AJ001903.1|TDAJ1903 Triticum durum mRNA for thioredoxin H Length = 630 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 173 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 232 ||||||||| | ||||| |||||||| || |||||||| ||||| || |||| || ||| Sbjct: 180 aagctggtggtgattgacttcactgcatcatggtgcggaccatgccgcatcatggctcca 239 Query: 233 gtctttgctgagtacgccaagaagttccc 261 | |||||||| ||||||||||||||| Sbjct: 240 atttttgctgatctcgccaagaagttccc 268
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgtcat 225 |||||| |||||||||||| || |||||||||||||| Sbjct: 17877464 atttcagtgcttcctggtgtggaccatgtcgtgtcat 17877500 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 17535258 atggccgccgaggagggagc 17535277 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 15556977 atggccgccgaggagggagc 15556958 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 2371293 atggccgccgaggagggagc 2371274
>dbj|AK101462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F19, full insert sequence Length = 851 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgtcat 225 |||||| |||||||||||| || |||||||||||||| Sbjct: 684 atttcagtgcttcctggtgtggaccatgtcgtgtcat 720
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgtcat 225 |||||| |||||||||||| || |||||||||||||| Sbjct: 74219 atttcagtgcttcctggtgtggaccatgtcgtgtcat 74255
>emb|AJ844021.1| Plantago major mRNA for thioredoxin 1 (trx1 gene) Length = 600 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Plus Query: 173 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 232 ||||||||| | ||||| ||||||||||| ||||| || ||||| || |||| |||||| Sbjct: 160 aagctggtggttattgacttcactgcttcgtggtgtggaccatgccgcttcatcgcccca 219 Query: 233 gtctttgctgag 244 |||| |||||| Sbjct: 220 atcttggctgag 231
>emb|Z70677.1|RCTHIORXN R.communis mRNA for thioredoxin Length = 603 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 271 cttcctgaaggtggatgttgatgagctgaag 301 |||||||||||||||||| ||||| |||||| Sbjct: 205 cttcctgaaggtggatgtggatgaactgaag 235
>ref|XM_476046.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 399 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgt 222 |||||| |||||||||||| || ||||||||||| Sbjct: 149 atttcagtgcttcctggtgtggaccatgtcgtgt 182
>emb|AL035079.14|HS53C18 Human DNA sequence from clone RP1-53C18 on chromosome 11p12-13 Contains the CAT gene for Catalase, the first coding exon of the ortholog of rat Ankyrin repeat protein CCA3, a Recepin partial pseudogene, and a pseudogene similar to part of DNAJ proteins (HIRIP4, DNJ3, CPR3). Contains two CpG islands, complete sequence Length = 136284 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 131 caagagttcgatacccacatggccaa 156 ||||||||||| |||||||||||||| Sbjct: 53326 caagagttcgagacccacatggccaa 53351
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgt 222 |||||| |||||||||||| || ||||||||||| Sbjct: 52911 atttcagtgcttcctggtgtggaccatgtcgtgt 52878
>gb|DQ083183.1| Oryza sativa (indica cultivar-group) clone 4S1C03 mRNA sequence Length = 325 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 tgaggcaatgccgaccttcctgtttatcaaggacggtg 362 |||| |||||||||||||||| || |||||||| |||| Sbjct: 1 tgagacaatgccgaccttcctattcatcaaggatggtg 38
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgt 222 |||||| |||||||||||| || ||||||||||| Sbjct: 4078217 atttcagtgcttcctggtgtggaccatgtcgtgt 4078184 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 tgttgaggcaatgccgaccttcctgtttatcaagga 357 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 24965637 tgttgaggctatgccaacattcctgtttatgaagga 24965672
>dbj|AK067480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B08, full insert sequence Length = 3066 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgt 222 |||||| |||||||||||| || ||||||||||| Sbjct: 1909 atttcagtgcttcctggtgtggaccatgtcgtgt 1942
>dbj|AK060918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G10, full insert sequence Length = 1012 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgt 222 |||||| |||||||||||| || ||||||||||| Sbjct: 457 atttcagtgcttcctggtgtggaccatgtcgtgt 490
>gb|DQ306739.1| Hevea brasiliensis isolate SSH10 mRNA sequence Length = 327 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 atcttcctgaaggtggatgttgatga 294 |||||||||||||||||||| ||||| Sbjct: 273 atcttcctgaaggtggatgtggatga 248
>gb|AF435817.1| Oryza sativa thioredoxin h-like protein mRNA, complete cds Length = 399 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgt 222 |||||| |||||||||||| || ||||||||||| Sbjct: 149 atttcagtgcttcctggtgtggaccatgtcgtgt 182
>ref|NM_101829.2| Arabidopsis thaliana ATTRX4; thiol-disulfide exchange intermediate AT1G19730 (ATTRX4) mRNA, complete cds Length = 652 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 232 gccatcttcttcaaggtggatgttgatga 260
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 caaggacaccggcaagctggtgatc 184 |||||||||||||| |||||||||| Sbjct: 1229155 caaggacaccggcacgctggtgatc 1229179
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 39008 gccatcttcttcaaggtggatgttgatga 39036
>ref|XM_541527.2| PREDICTED: Canis familiaris hypothetical LOC484412 (LOC484412), mRNA Length = 2580 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gttccctggggccatcttcct 276 ||||||||||||||||||||| Sbjct: 2233 gttccctggggccatcttcct 2213
>gb|AF159388.1| Phalaris coerulescens thioredoxin-like protein (Trx) mRNA, Trx-1 allele, complete cds Length = 978 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgtcat 225 |||||| |||||||||||| || ||||| |||||||| Sbjct: 728 atttcagtgcttcctggtgtgggccatgccgtgtcat 764
>ref|XM_503146.1| Yarrowia lipolytica CLIB122, YALI0D22308g predicted mRNA Length = 333 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 agaaggtggacagtgttgtcggtgg 387 ||||||||||||||||| ||||||| Sbjct: 146 agaaggtggacagtgttctcggtgg 170
>emb|Z35473.1|ATTHIRED1 A.thaliana (GREN) mRNA for thioredoxin Length = 642 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 221 gccatcttcttcaaggtggatgttgatga 249
>emb|AJ319808.1|PSA319808 Pisum sativum mRNA for thioredoxin h (trxh gene) Length = 593 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 188 gatttcactgcttcctggtgcggtccatg 216 ||||| |||||||| |||||||||||||| Sbjct: 156 gattttactgcttcgtggtgcggtccatg 184
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagc 108 ||||||||||||||||||||| Sbjct: 7522817 aatggccgccgaggagggagc 7522837
>emb|BX818339.1|CNS0ACPU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 226 gccatcttcttcaaggtggatgttgatga 254
>emb|BX841902.1|CNS09Y73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 215 gccatcttcttcaaggtggatgttgatga 243
>gb|BT004710.1| Arabidopsis thaliana At1g19730 gene, complete cds Length = 360 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 181 gccatcttcttcaaggtggatgttgatga 209
>gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BAC F6F9 genomic sequence, complete sequence Length = 119942 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 99274 gccatcttcttcaaggtggatgttgatga 99302
>gb|AY088698.1| Arabidopsis thaliana clone 9219 mRNA, complete sequence Length = 590 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 232 gccatcttcttcaaggtggatgttgatga 260
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagc 108 ||||||||||||||||||||| Sbjct: 31232 aatggccgccgaggagggagc 31252
>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0024K20 Length = 165041 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 aatggccgccgaggagggagc 108 ||||||||||||||||||||| Sbjct: 126621 aatggccgccgaggagggagc 126641
>dbj|AK118542.1| Arabidopsis thaliana At1g19730 mRNA for putative thioredoxin, complete cds, clone: RAFL19-77-A10 Length = 556 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 203 gccatcttcttcaaggtggatgttgatga 231
>gb|AF159389.1|AF159389 Phalaris coerulescens thioredoxin-like protein (Trx) mRNA, Trx-2 allele, complete cds Length = 975 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 189 atttcactgcttcctggtgcggtccatgtcgtgtcat 225 |||||| |||||||||||| || ||||| |||||||| Sbjct: 725 atttcagtgcttcctggtgtgggccatgccgtgtcat 761
>gb|U35828.1|ATU35828 Arabidopsis thaliana thioredoxin h (TRX4) gene, partial cds Length = 829 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gccatcttcctgaaggtggatgttgatga 294 ||||||||| | ||||||||||||||||| Sbjct: 579 gccatcttcttcaaggtggatgttgatga 607
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 tggatgttgatgagctgaagg 302 ||||||||||||||||||||| Sbjct: 6342206 tggatgttgatgagctgaagg 6342186
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 agaaggtggacagtgttgtcggtgg 387 ||||||||||||||||| ||||||| Sbjct: 2837430 agaaggtggacagtgttctcggtgg 2837406
>ref|XM_475666.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 366 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 tgttgaggcaatgccgaccttcctgtttatcaagga 357 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 252 tgttgaggctatgccaacattcctgtttatgaagga 287
>ref|XM_471225.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3972 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195508.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBa0082N11.6), mRNA Length = 900 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195753.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBb0008A05.22), mRNA Length = 3798 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195681.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBa0004A10.2), mRNA Length = 4104 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195341.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0034E15.13), mRNA Length = 768 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 334 atggccgccgaggagggagc 353
>ref|XM_472106.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|XM_471895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1917 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 173 atggccgccgaggagggagc 192
>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046F10, complete sequence Length = 184041 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 25764 atggccgccgaggagggagc 25783
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 5821 atggccgccgaggagggagc 5802
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 tgttgaggcaatgccgaccttcctgtttatcaagga 357 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 34490 tgttgaggctatgccaacattcctgtttatgaagga 34525
>gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA Length = 4025 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggccatcttcctgaaggtggatgt 288 ||||||||||||||| |||||||| Sbjct: 3206 ggccatcttcctgaaagtggatgt 3229
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 19088329 atggccgccgaggagggagc 19088310
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 69248 atggccgccgaggagggagc 69267
>emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in linkage group 21, complete sequence Length = 129478 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 atttcactgcttcctggtgc 208 |||||||||||||||||||| Sbjct: 68856 atttcactgcttcctggtgc 68837
>emb|BX842603.2|OSJN00300 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1159F04, complete sequence Length = 158330 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 17034 atggccgccgaggagggagc 17015
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 69937 atggccgccgaggagggagc 69956
>emb|BX569684.2|OSJN00290 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0046K02, complete sequence Length = 109366 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 98530 atggccgccgaggagggagc 98511
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 96612 atggccgccgaggagggagc 96593
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 56155 atggccgccgaggagggagc 56136
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 caaggacaccggcaagctgg 179 |||||||||||||||||||| Sbjct: 1956425 caaggacaccggcaagctgg 1956444
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 caccggcaagctggtgatca 185 |||||||||||||||||||| Sbjct: 1631548 caccggcaagctggtgatca 1631567
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173558 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggccatcttcctgaaggtggatgt 288 ||||||||||||||| |||||||| Sbjct: 67547 ggccatcttcctgaaagtggatgt 67570
>gb|AC090605.7| Homo sapiens chromosome 15, clone RP11-261P5, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 gagttcgatacccacatggccaat 157 |||||||| ||||||||||||||| Sbjct: 99694 gagttcgagacccacatggccaat 99717
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 13945 atggccgccgaggagggagc 13964
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 11865 atggccgccgaggagggagc 11846
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 16745 atggccgccgaggagggagc 16764
>ref|NM_079214.2| Drosophila melanogaster Thioredoxin-like CG5495-RA (Txl), mRNA Length = 1151 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggccatcttcctgaaggtggatgt 288 ||||||||||||||| |||||||| Sbjct: 319 ggccatcttcctgaaagtggatgt 342
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 106620 atggccgccgaggagggagc 106601
>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0065C16, from Chromosome 10, complete sequence Length = 146391 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 101409 atggccgccgaggagggagc 101390
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 11151846 atggccgccgaggagggagc 11151827
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 12906905 atggccgccgaggagggagc 12906886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 8851548 atggccgccgaggagggagc 8851529 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 8419381 atggccgccgaggagggagc 8419400 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 7382881 atggccgccgaggagggagc 7382900 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 6272379 atggccgccgaggagggagc 6272398
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 6889105 atggccgccgaggagggagc 6889124 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 6576860 atggccgccgaggagggagc 6576841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 19082370 atggccgccgaggagggagc 19082351
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 15226540 atggccgccgaggagggagc 15226521
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 37432793 atggccgccgaggagggagc 37432774
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 27330 atggccgccgaggagggagc 27311
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 144827 atggccgccgaggagggagc 144808
>gb|AF143404.1|AF143404 Drosophila melanogaster thioredoxin-like protein TXL (txl) mRNA, complete cds Length = 1087 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggccatcttcctgaaggtggatgt 288 ||||||||||||||| |||||||| Sbjct: 277 ggccatcttcctgaaagtggatgt 300
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008C07 Length = 146008 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 110315 atggccgccgaggagggagc 110296
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 139824 atggccgccgaggagggagc 139843
>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063K04 Length = 158792 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 37661 atggccgccgaggagggagc 37642
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1165C09 Length = 202985 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 7153 atggccgccgaggagggagc 7172
>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0003D23 Length = 151604 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 10207 atggccgccgaggagggagc 10188
>emb|X78822.1|CRTRXH C.reinhardtii mRNA for thioredoxin-h Length = 1285 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 catcttcctgaaggtggatgttga 291 ||||||||||||||| |||||||| Sbjct: 636 catcttcctgaaggtcgatgttga 659 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 catcttcctgaaggtggatgttga 291 ||||||||||||||| |||||||| Sbjct: 345 catcttcctgaaggtcgatgttga 322
>emb|X80887.1|CRTRXH1 C.reinhardtii Trx h gene Length = 1450 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 catcttcctgaaggtggatgttga 291 ||||||||||||||| |||||||| Sbjct: 551 catcttcctgaaggtcgatgttga 574
>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full insert sequence Length = 3740 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 tgttgaggcaatgccgaccttcctgtttatcaagga 357 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 397 tgttgaggctatgccaacattcctgtttatgaagga 432
>dbj|AK059385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G10, full insert sequence Length = 682 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 tgttgaggcaatgccgaccttcctgtttatcaagga 357 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 366 tgttgaggctatgccaacattcctgtttatgaagga 401
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 119821 atggccgccgaggagggagc 119802
>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete sequence Length = 284268 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggccatcttcctgaaggtggatgt 288 ||||||||||||||| |||||||| Sbjct: 236784 ggccatcttcctgaaagtggatgt 236807
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 12914245 atggccgccgaggagggagc 12914226 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 8856687 atggccgccgaggagggagc 8856668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 8424480 atggccgccgaggagggagc 8424499 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 7387080 atggccgccgaggagggagc 7387099 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 6273965 atggccgccgaggagggagc 6273984
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 11231035 atggccgccgaggagggagc 11231016
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05, complete sequence Length = 173950 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atggccgccgaggagggagc 108 |||||||||||||||||||| Sbjct: 15998 atggccgccgaggagggagc 16017
>dbj|AB053294.1| Oryza sativa (japonica cultivar-group) RTRXH2 mRNA for thioredoxin h, complete cds Length = 740 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 322 tgttgaggcaatgccgaccttcctgtttatcaagga 357 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 367 tgttgaggctatgccaacattcctgtttatgaagga 402 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,300,550 Number of Sequences: 3902068 Number of extensions: 3300550 Number of successful extensions: 59212 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 58629 Number of HSP's gapped (non-prelim): 579 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)