ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55a07 |
|---|---|
| Clone Library Name | barley_pub |
>DLGP2_HUMAN (Q9P1A6) Disks large-associated protein 2 (DAP-2)| (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2) (Fragment) Length = 1019 Score = 34.3 bits (77), Expect = 0.16 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR + P +SVTA +ST + Q Sbjct: 575 KKTPPPVPPRTTSKPLISVTAQSSTESTQ 603
>DLGP2_RAT (P97837) Disks large-associated protein 2 (DAP-2)| (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2) Length = 1059 Score = 34.3 bits (77), Expect = 0.16 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR + P +SVTA +ST + Q Sbjct: 614 KKTPPPVPPRTTSKPLISVTAQSSTESTQ 642
>DLGP2_MOUSE (Q8BJ42) Disks large-associated protein 2 (DAP-2)| (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2) Length = 1059 Score = 34.3 bits (77), Expect = 0.16 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR + P +SVTA +ST + Q Sbjct: 614 KKTPPPVPPRTTSKPLISVTAQSSTESTQ 642
>DLGP1_RAT (P97836) Disks large-associated protein 1 (DAP-1) (Guanylate| kinase-associated protein) (rGKAP) (SAP90/PSD-95-associated protein 1) (SAPAP1) (PSD-95/SAP90-binding protein 1) Length = 992 Score = 33.5 bits (75), Expect = 0.28 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR P +S+TA +ST + Q Sbjct: 555 KKTPPPVPPRTTTKPFISITAQSSTESAQ 583
>DLGP1_MOUSE (Q9D415) Disks large-associated protein 1 (DAP-1) (Guanylate| kinase-associated protein) (SAP90/PSD-95-associated protein 1) (SAPAP1) (PSD-95/SAP90-binding protein 1) Length = 992 Score = 33.5 bits (75), Expect = 0.28 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR P +S+TA +ST + Q Sbjct: 555 KKTPPPVPPRTTTKPFISITAQSSTESAQ 583
>DLGP1_HUMAN (O14490) Disks large-associated protein 1 (DAP-1) (Guanylate| kinase-associated protein) (hGKAP) (SAP90/PSD-95-associated protein 1) (SAPAP1) (PSD-95/SAP90-binding protein 1) Length = 977 Score = 33.5 bits (75), Expect = 0.28 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR P +S+TA +ST + Q Sbjct: 539 KKTPPPVPPRTTTKPFISITAQSSTESAQ 567
>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 992 Score = 32.7 bits (73), Expect = 0.47 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR + P +SVT +ST + Q Sbjct: 558 KKTPPPVPPRTTSKPFISVTVQSSTESAQ 586
>DLGP4_HUMAN (Q9Y2H0) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 989 Score = 32.7 bits (73), Expect = 0.47 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADASTPNPQ 87 KK PPP+ PR + P +SVT +ST + Q Sbjct: 558 KKTPPPVPPRTTSKPFISVTVQSSTESAQ 586
>FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2)| Length = 1609 Score = 30.4 bits (67), Expect = 2.3 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Frame = +1 Query: 157 SLLSEPLPQP------WPLVSEVVSKKWKRWRIPASVKH---LS*ARRTIPLLLFCTSRS 309 SLLS LP P P + V S + +P S K LS +I + F +S S Sbjct: 1293 SLLSTSLPSPAFTSSTLPTATAVSSSTFIASSLPLSSKSSLSLSPVSSSILMSQFSSSSS 1352 Query: 310 RC--LARLPSVRISPGRASMRSLSPTATI 390 LA LPS+ ISP ++ L PT +I Sbjct: 1353 SSSSLASLPSLSISPTVDTVSVLQPTTSI 1381
>SUV92_MOUSE (Q9EQQ0) Histone-lysine N-methyltransferase, H3 lysine-9 specific 2| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 2) (H3-K9-HMTase 2) (Suppressor of variegation 3-9 homolog 2) (Su(var)3-9 homolog 2) Length = 477 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 199 RPTAKVGEGVRTAGRRRAWEGTAMAAAPASERRRGWPVEGW 77 RP+A G R AG +RAW G AA E RG + W Sbjct: 47 RPSA----GERRAGSQRAWSGAPRAAVFGDECARGALFKAW 83
>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 979 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADAST 75 +K PPP+ P + A P +S+TA +ST Sbjct: 538 RKAPPPIPPGSQAPPRISITAQSST 562
>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADAST 75 +K PPP+ P + A P +S+TA +ST Sbjct: 536 RKAPPPIPPGSQAPPRISITAQSST 560
>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 1 KKPPPPLYPRAAASP*LSVTADAST 75 +K PPP+ P + A P +S+TA +ST Sbjct: 536 RKAPPPIPPGSQAPPRISITAQSST 560
>RBCC1_HUMAN (Q8TDY2) RB1-inducible coiled-coil protein 1| Length = 1594 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 7/42 (16%) Frame = +3 Query: 204 GCIKEMEEVENSSKRKAPEL-------SSEDNSSAVVLHEQE 308 G IKE EE EN K+ EL ++DN A+V HE+E Sbjct: 880 GLIKETEENENKIKKLKGELVCLEEVLQNKDNEFALVKHEKE 921
>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)| Length = 1772 Score = 29.3 bits (64), Expect = 5.2 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 17/107 (15%) Frame = +3 Query: 81 PSTGQPLRLSLAGAAAIAVPSQARRLPAVRTP------SPTLAVGL*GCIK-------EM 221 P Q R + A +++ P +A P +TP +P+ G +K E Sbjct: 73 PGGRQQRRAAAAAKESLSTPKRAPAKPKEKTPKATPKKTPSRRNGRRRSVKVEEVEEEEP 132 Query: 222 EEVENSSKRKAPELSSEDNSSAVVLHEQEPLPGSTA----KRQNLAR 350 EE E + +APE E + V E+E P S K+Q LA+ Sbjct: 133 EEEEGPEEEEAPEEEVEGDDEEEVQVEEEAEPVSLTPLEEKKQELAK 179
>HXB3_CHICK (P23682) Homeobox protein Hox-B3 (Chox-2.7)| Length = 399 Score = 29.3 bits (64), Expect = 5.2 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%) Frame = +3 Query: 72 NPQPSTGQPLRLSLAGAAAIAVPSQARRLP-----AVRTPSPTLAVGL*GCIKEMEEVEN 236 +P P+ P + ++ ++PS + ++P +V+TPS T + M+E Sbjct: 79 HPPPTVSPPPNPTTNSTSSNSIPSGSAKVPRVKPTSVQTPSLTKQI-----FPWMKESRQ 133 Query: 237 SSKRKAPELSSEDNSSAVVLHEQEPLPGSTAKRQ 338 +SK+K+ S+E S E+ P PGS+A ++ Sbjct: 134 NSKQKSSSPSTETCSG-----EKTP-PGSSASKR 161
>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220) Length = 1600 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Frame = +3 Query: 210 IKEMEEVENSSKRKAPELSSEDNSSAVVLHEQEPLPGSTAKRQNLARSCIHEVAVPNG-- 383 ++E EE E +A E SE ++ E P+P + ++ A + V+VP Sbjct: 457 MEEEEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAVSVPKRRR 516 Query: 384 --YDLSKDEAVHGTLSTLR 434 +L+K EAV L + Sbjct: 517 KIKELNKKEAVGDLLDAFK 535
>SN1L1_RAT (Q9R1U5) Serine/threonine-protein kinase SNF1-like kinase 1 (EC| 2.7.11.1) (Serine/threonine-protein kinase SNF1LK) (Salt-inducible protein kinase) (Protein kinase KID2) Length = 776 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 Query: 246 RKAPELSSEDNSSAVVLHEQEPLPGSTAKRQNLARSCIH 362 R+ P L E QEPLPGST +R LA H Sbjct: 451 RQGPSLEEEQEV-------QEPLPGSTGRRHTLAEVSTH 482
>SN1L1_MOUSE (Q60670) Serine/threonine-protein kinase SNF1-like kinase 1 (EC| 2.7.11.1) (Serine/threonine-protein kinase SNF1LK) (HRT-20) (Myocardial SNF1-like kinase) Length = 779 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 Query: 246 RKAPELSSEDNSSAVVLHEQEPLPGSTAKRQNLARSCIH 362 R+ P L E QEPLPGST +R LA H Sbjct: 451 RQGPSLEEEQEV-------QEPLPGSTGRRHTLAEVSTH 482
>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor| with BRCT domains 1) Length = 2089 Score = 28.9 bits (63), Expect = 6.8 Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 3/157 (1%) Frame = +1 Query: 4 KPPPPLYPRAAASP*LSVTADASTPNPQXXXXXXXXXXXXXXXXXXXKLVASLLSEPLPQ 183 K P P+ P A + T T P A L Sbjct: 1156 KTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTALELQPSTST 1215 Query: 184 PWPLVSEVVSKKWKRWRIPASVKHLS*ARRTIPLLLFCTSRSRCLARLPSVRISPGR--- 354 P+ SE S+ + + +SVK T P L TS + + P+ + + GR Sbjct: 1216 DRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNR 1275 Query: 355 ASMRSLSPTATICPRMRPYMGPFQPCVYGEMAKHTRS 465 +S+++ P P +RP +P ++ TRS Sbjct: 1276 SSVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRS 1312
>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043| Length = 1716 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +3 Query: 75 PQPSTGQPLRLSLAGAAAIAVPSQARRLPAVRTP-SPTLAVGL*GCIKEMEEVENSSKRK 251 PQP T +R+S++ +I+ P+ ++ + +P SP VG ++ +S + Sbjct: 1320 PQPGTAGGMRVSVSSKGSISTPNSPVKMTLIPSPNSPFQKVG---------KLASSDTGE 1370 Query: 252 APELSSEDNSSAVVLHEQEP 311 + + S+E +S+ E P Sbjct: 1371 SDQSSTETDSTVKSQEESNP 1390
>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 28.9 bits (63), Expect = 6.8 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 17/96 (17%) Frame = +3 Query: 75 PQPSTGQPLRLSLAGAAAIAVPSQARRL------------PAVRTPSPTLAVGL*GCIKE 218 P PST LSLA A ++AV + A+ L PA P P++ + L C +E Sbjct: 896 PLPSTTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPGPLPSMPLPLASCDQE 955 Query: 219 -----MEEVENSSKRKAPELSSEDNSSAVVLHEQEP 311 E EN + R + D A + E +P Sbjct: 956 SLSAQTAETENEASRNPAQPLLGDARLAPISEEGKP 991
>TONB_KLEPN (P45610) Protein tonB| Length = 243 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/80 (27%), Positives = 30/80 (37%) Frame = +3 Query: 78 QPSTGQPLRLSLAGAAAIAVPSQARRLPAVRTPSPTLAVGL*GCIKEMEEVENSSKRKAP 257 QPS QP+ +++ PA P P V +E V P Sbjct: 38 QPSPTQPIEITMVA-------------PADLEPPPAQPV--------VEPVVEPEPEPEP 76 Query: 258 ELSSEDNSSAVVLHEQEPLP 317 E+ E AVV+H+ EP P Sbjct: 77 EVVPEPPKEAVVIHKPEPKP 96
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +1 Query: 301 SRSRCLARLPSVRISPG----RASMRSLSPTATICPRMRPYMG 417 SRS LAR PS+ + P R RS SP + PR+ P G Sbjct: 881 SRSPGLARFPSLALRPSSRERRGGSRSPSPQSRQLPRVAPDRG 923
>Y7700_STRCO (Q9F1Y6) Hypothetical protein SCO7700| Length = 440 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 145 KLVASLLSEPLPQPWPLVSEVVSKKWKRW 231 + V L P+P+P P+ E VS++ KRW Sbjct: 117 RAVPGLYHHPVPEPDPVRVEEVSRRIKRW 145
>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 28.5 bits (62), Expect = 8.9 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 17/94 (18%) Frame = +3 Query: 81 PSTGQPLRLSLAGAAAIAVPSQARRL------------PAVRTPSPTLAVGL*GCIKE-- 218 PST LSLA A ++AV + A+ L PA P P+L + L C +E Sbjct: 898 PSTTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPGPLPSLPLSLASCDQESL 957 Query: 219 ---MEEVENSSKRKAPELSSEDNSSAVVLHEQEP 311 E EN + R + D A + E +P Sbjct: 958 SAQTAETENEASRNPAQPLLGDARLAPISEEGKP 991
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +1 Query: 301 SRSRCLARLPSVRISPG----RASMRSLSPTATICPRMRPYMG 417 SRS LAR PS+ + P R RS SP + PR+ P G Sbjct: 883 SRSPGLARFPSLALHPSSRERRGGSRSPSPQSRQLPRVAPDRG 925
>IBP3_HUMAN (P17936) Insulin-like growth factor-binding protein 3 precursor| (IGFBP-3) (IBP-3) (IGF-binding protein 3) Length = 291 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/75 (28%), Positives = 29/75 (38%) Frame = +3 Query: 75 PQPSTGQPLRLSLAGAAAIAVPSQARRLPAVRTPSPTLAVGL*GCIKEMEEVENSSKRKA 254 P P +PL+ L G S RL A P+P G E EE ++ ++ Sbjct: 96 PSPDEARPLQALLDGRGLCVNASAVSRLRAYLLPAPPAP----GNASESEEDRSAGSVES 151 Query: 255 PELSSEDNSSAVVLH 299 P +SS S H Sbjct: 152 PSVSSTHRVSDPKFH 166
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Frame = +3 Query: 213 KEMEEVENSSKRKAPEL----SSEDNSSAVVLHEQEPLPGST 326 K+ EEVE + K K EL + ++NSS + ++EP+P T Sbjct: 553 KKKEEVEENKKSKTKELPPKKTKKNNSSNSNVSKKEPVPTKT 594
>DUT_METCA (Q603M1) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 151 Score = 25.0 bits (53), Expect(2) = 9.9 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -1 Query: 258 QVLYACWNSPPLPF 217 QVL +CWN P PF Sbjct: 95 QVLVSCWNRGPEPF 108 Score = 21.9 bits (45), Expect(2) = 9.9 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = -2 Query: 419 GPMYGLILGQIVAVGDSD 366 G +G++LG +V + DSD Sbjct: 74 GHKHGIVLGNLVGLIDSD 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,068,514 Number of Sequences: 219361 Number of extensions: 1179722 Number of successful extensions: 5081 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4751 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5076 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
