ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/E... 30 3.5
2SAF_STRGR (P55109) Secreted enzymes activator 29 4.6
3PODXL_MOUSE (Q9R0M4) Podocalyxin-like protein 1 precursor 29 4.6
4AXE1_TRIRE (Q99034) Acetylxylan esterase precursor (EC 3.1.1.72) 29 4.6
5ATG26_EMENI (Q5B4C9) Sterol 3-beta-glucosyltransferase (EC 2.4.1... 28 7.9
6CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5... 28 7.9
7BEH2_ARATH (Q94A43) BES1/BZR1 homolog protein 2 28 7.9
8MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127) 28 7.9

>Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/ECU08_2120|
          Length = 207

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -3

Query: 251 LSRPVGHSVEHPQRAVQTRASTAARGRHQPPGVEEASTMRPAPTESSGTRKR 96
           + RP  H    P      R+ ++AR R QPP      T +  P+ ++ +R +
Sbjct: 1   MPRPASHLAPMPSDHPDFRSESSARLRCQPPRTNNCGTFKQPPSVAATSRPK 52



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>SAF_STRGR (P55109) Secreted enzymes activator|
          Length = 101

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = -3

Query: 236 GHSVEHPQRAVQTRASTAARGRHQPPGVEEASTMRPAPTESSGTRKRRRASVSWRWVA 63
           GH  +  + A  +RAS AA G         AS+ R A +E  G     RA V W   A
Sbjct: 40  GHRAQ-TRLAASSRASRAAVGSFDGAKNRPASSRRQAASECQGPASSSRAGVRWAGTA 96



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>PODXL_MOUSE (Q9R0M4) Podocalyxin-like protein 1 precursor|
          Length = 503

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -3

Query: 251 LSRPVGHSVEHPQRAVQTRASTAAR--GRHQPPGVEEASTMRPAPTESSGTRK 99
           LS P   +   PQ+ V +  STA+   G+H P  V  +S   P+   S+ T K
Sbjct: 160 LSTPTTDNTTSPQQPVDSSPSTASHPVGQHTPAAVPSSSGSTPSTDNSTLTWK 212



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>AXE1_TRIRE (Q99034) Acetylxylan esterase precursor (EC 3.1.1.72)|
          Length = 302

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 236 GHSVEHPQRAVQTRASTAARGRHQPPGVEEASTMRPAPTESSGT 105
           G+  E+ Q+A+    S  + G  QPPG    ST RP  T +  +
Sbjct: 220 GYGQEYGQQALAFINSQLSSGGSQPPGGGPTSTSRPTSTRTGSS 263



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>ATG26_EMENI (Q5B4C9) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1396

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -3

Query: 221 HPQRAVQTRASTAARGRHQPPGVEEASTMRPAPTESSGTRKRRRAS 84
           H   A +TR+S+  RGR     + E    RP    S+   K++ AS
Sbjct: 122 HVPSAPETRSSSRERGRRHRRSISEHKLFRPFKAGSASQDKKQDAS 167



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>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -3

Query: 224 EHPQRAVQTRASTAA--RGRHQPPGVEEASTMRPAPTESSGTRKRRRASVS 78
           EH +R  Q   S A+  R RH   G E A   +   + SSG R++  ++ S
Sbjct: 215 EHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATS 265



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>BEH2_ARATH (Q94A43) BES1/BZR1 homolog protein 2|
          Length = 318

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
 Frame = -3

Query: 371 ISPPV*IPDIRISERKASQSQLYDPRHTLMPLQKADMIR*LSRPVG---HSVEHPQRAVQ 201
           ++PP+  P  R S+RK +  QL                     P G   H + HP  A+ 
Sbjct: 170 VTPPLSSPTSRGSKRKLTSEQL---------------------PNGGSLHVLRHPLFAIS 208

Query: 200 TRASTAARGRHQ-PPGVEEASTMRPAPTESSG 108
             +S   R  HQ PP + E         E SG
Sbjct: 209 APSSPTRRAGHQTPPTIPECDESEEDSIEDSG 240



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>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)|
          Length = 544

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 161 PGVEEASTMRPAPTESSGTRK-RRRASVSW 75
           P +  A+++RPAP E  G R    R S SW
Sbjct: 63  PAIRRAASLRPAPAEGGGARSGPERNSGSW 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,853,160
Number of Sequences: 219361
Number of extensions: 917880
Number of successful extensions: 3047
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3041
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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