>ref|NM_186040.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1679

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 216 agggtgttcgacggaatgtcccaccgg 242
           |||||||||||||||||||||||||||
Sbjct: 195 agggtgttcgacggaatgtcccaccgg 221

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 216      agggtgttcgacggaatgtcccaccgg 242
                |||||||||||||||||||||||||||
Sbjct: 27895543 agggtgttcgacggaatgtcccaccgg 27895569

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 216   agggtgttcgacggaatgtcccaccgg 242
             |||||||||||||||||||||||||||
Sbjct: 58901 agggtgttcgacggaatgtcccaccgg 58927

>dbj|AK106855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B07, full
           insert sequence
          Length = 1679

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 216 agggtgttcgacggaatgtcccaccgg 242
           |||||||||||||||||||||||||||
Sbjct: 195 agggtgttcgacggaatgtcccaccgg 221

>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence
          Length = 160429

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   ctaatatcaggaattcataca 360
             |||||||||||||||||||||
Sbjct: 58545 ctaatatcaggaattcataca 58525

>gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, complete sequence
          Length = 159698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   tgtgactgacttgcttttctt 330
             |||||||||||||||||||||
Sbjct: 64811 tgtgactgacttgcttttctt 64831

>gb|AC010528.8|AC010528 Homo sapiens chromosome 16 clone RP11-150D5, complete sequence
          Length = 168172

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 308  gttgtgactgacttgcttttc 328
            |||||||||||||||||||||
Sbjct: 5509 gttgtgactgacttgcttttc 5489

>gb|AC106741.3| Homo sapiens chromosome 16 clone RP11-105F24, complete sequence
          Length = 176424

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 308 gttgtgactgacttgcttttc 328
           |||||||||||||||||||||
Sbjct: 822 gttgtgactgacttgcttttc 842

>gb|AC007508.2|AC007508 Genomic sequence for Arabidopsis thaliana BAC F1K23 from chromosome I,
             complete sequence
          Length = 101305

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   cttgcttttctttcagagatt 339
             |||||||||||||||||||||
Sbjct: 42300 cttgcttttctttcagagatt 42320

>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   gcatagtgcttgcttcttcta 154
             |||||||||||||||||||||
Sbjct: 82907 gcatagtgcttgcttcttcta 82887

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 215   gagggtgttcgacggaatgtcccaccgg 242
             |||||||||||||| |||| ||||||||
Sbjct: 11014 gagggtgttcgacgaaatgccccaccgg 11041

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 215    gagggtgttcgacggaatgtcccaccgg 242
              |||||||||||||| |||| ||||||||
Sbjct: 117786 gagggtgttcgacgaaatgccccaccgg 117813

>gb|AC125583.3| Rattus norvegicus 4 BAC CH230-1A7 (Children's Hospital Oakland
           Research Institute) complete sequence
          Length = 205786

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 323 cttttctttcagagattctaatat 346
           ||||||||| ||||||||||||||
Sbjct: 344 cttttcttttagagattctaatat 367

>gb|AC183990.2| Pan troglodytes BAC clone CH251-134O11 from chromosome 6, complete
            sequence
          Length = 166671

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  ttttctttcagagattctaa 343
            ||||||||||||||||||||
Sbjct: 4585 ttttctttcagagattctaa 4566

>ref|XM_748197.1| Aspergillus fumigatus Af293 thioredoxin (Afu5g13640) partial mRNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   cgcccgtctcctcttcctcg 106
            ||||||||||||||||||||
Sbjct: 1086 cgcccgtctcctcttcctcg 1105

>gb|AC094253.7| Rattus norvegicus 4 BAC CH230-3E12 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 209550

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   cttttctttcagagattctaatat 346
             ||||||||| ||||||||||||||
Sbjct: 91626 cttttcttttagagattctaatat 91649

>emb|AL365217.10| Human DNA sequence from clone RP11-74E24 on chromosome 6 Contains a
             KIAA0663 pseudogene and part of the gene for a novel
             EGF-like domain containing protein, complete sequence
          Length = 104957

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ttttctttcagagattctaa 343
             ||||||||||||||||||||
Sbjct: 54822 ttttctttcagagattctaa 54841

>emb|AL137245.11| Human DNA sequence from clone RP11-196I2 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 146994

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    ttttctttcagagattctaa 343
              ||||||||||||||||||||
Sbjct: 123561 ttttctttcagagattctaa 123580

>gb|AE005958.1| Caulobacter crescentus CB15 section 284 of 359 of the complete
           genome
          Length = 13027

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 tcaggaattcatacaggtgg 365
           ||||||||||||||||||||
Sbjct: 523 tcaggaattcatacaggtgg 504

>gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-63e12, complete sequence
          Length = 251117

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    taatatcaggaattcataca 360
              ||||||||||||||||||||
Sbjct: 163233 taatatcaggaattcataca 163214

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 215     gagggtgttcgacggaatgtcccaccgg 242
               |||||||||||||| |||| ||||||||
Sbjct: 3023770 gagggtgttcgacgaaatgccccaccgg 3023797

>dbj|AK108071.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-C07, full
           insert sequence
          Length = 1698

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 215 gagggtgttcgacggaatgtcccaccgg 242
           |||||||||||||| |||| ||||||||
Sbjct: 360 gagggtgttcgacgaaatgccccaccgg 387

>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2,
              fertilization-independent endosperm proteins, hypothetical
              protein, putative non-LTR retroelement reverse
              transcriptase, OCL5 protein, tryptophan synthase
              beta-subunit, hypothetical proteins, putative AP
              endonuclease, putative RNA polymerase II complex component
              SRB7, putative beta-1,3-glucanase, hypothetical protein,
              TNP2-like protein, hypothetical protein, putative
              phosphate/phosphoenolpyruvate translocator, putative
              protein, hypothetical proteins, putative
              galactosyltransferase family, hypothetical protein,
              putative cytochrome P450 family, putative lipid transfer
              protein, putative photoreceptor-interacting protein, and
              hypothetical protein genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 202197

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    tgagggtgttcgacggaatg 233
              ||||||||||||||||||||
Sbjct: 174514 tgagggtgttcgacggaatg 174533

>gb|AC026351.29| Homo sapiens 12 BAC RP11-176O5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179350

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    cttttctttcagagattcta 342
              ||||||||||||||||||||
Sbjct: 136004 cttttctttcagagattcta 136023

>emb|AL356364.18| Human DNA sequence from clone RP11-328I22 on chromosome 1 Contains a
             novel gene (LOC388739) and a CpG island, complete sequence
          Length = 102634

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ttttctttcagagattctaa 343
             ||||||||||||||||||||
Sbjct: 78086 ttttctttcagagattctaa 78067

>emb|AL928573.14| Zebrafish DNA sequence from clone DKEY-11F5, complete sequence
          Length = 244471

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ccacccacctccaactcacc 84
              ||||||||||||||||||||
Sbjct: 146984 ccacccacctccaactcacc 147003

>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   gtgacgaggatcatatagtt 310
             ||||||||||||||||||||
Sbjct: 56926 gtgacgaggatcatatagtt 56907


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,609,491
Number of Sequences: 3902068
Number of extensions: 3609491
Number of successful extensions: 65966
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65876
Number of HSP's gapped (non-prelim): 90
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)