Clone Name | bastl55a01 |
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Clone Library Name | barley_pub |
>FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP)| Length = 1212 Score = 30.8 bits (68), Expect = 2.1 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Frame = +3 Query: 150 KASERAVSVKNKPNDKEHEGKIARLE--------RSLQGLNEQLSFAHAECFEKDAILSK 305 K + +K K ++EH K RLE L+ L E S + +EC + L K Sbjct: 398 KTEAQCRELKKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSRSKSECTQLHLNLEK 457 Query: 306 QAKVAEEAILGWXXXXXXXXXXXXXLDDTLHEKAMVEXRIRQLDEALNVAAEERELLMKD 485 + + + D L+E +V+ R+++L E E+ EL +KD Sbjct: 458 EKNLTK---------------------DLLNELEVVKSRVKEL-ECSESRLEKAELSLKD 495
>KINH_SYNRA (O43093) Kinesin heavy chain (Synkin)| Length = 935 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = +3 Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335 E+ +V N+K + K+A LER+L EQL+ + E++A L K+ +AE ++ Sbjct: 781 EQYNNVLRASNNKAQQKKMAFLERNL----EQLTNVQKQLVEQNASLKKEVALAERKLI 835
>FLIP1_MOUSE (Q9CS72) Filamin-A-interacting protein 1 (FILIP)| Length = 1211 Score = 30.0 bits (66), Expect = 3.5 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Frame = +3 Query: 150 KASERAVSVKNKPNDKEHEGKIARLE--------RSLQGLNEQLSFAHAECFEKDAILSK 305 K + +K K ++EH K RLE L+ L E S + +EC + L K Sbjct: 399 KTEAQCRELKKKLQEEEHHSKELRLEVEKLQKRMSELEKLEEAFSRSKSECTQLHLNLEK 458 Query: 306 QAKVAEEAILGWXXXXXXXXXXXXXLDDTLHEKAMVEXRIRQLDEALNVAAEERELLMKD 485 + + + D L+E +V+ R+++L E E+ EL +KD Sbjct: 459 EKNLTK---------------------DLLNELEVVKSRVKEL-ECSESRLEKVELSLKD 496
>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa| Golgi complex-associated protein) (GCP372) Length = 3259 Score = 30.0 bits (66), Expect = 3.5 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +3 Query: 207 GKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAILGWXXXXXXXXXXXXXLD 386 G I RL +SL + Q+S A+ EKD +L + A + EE +D Sbjct: 1511 GTIERLTKSLADVESQVS---AQNKEKDTVLGRLALLQEE-----------RDKLITEMD 1556 Query: 387 DTLHEKAMVEXRIRQLDEALNVAAEERELLMKD 485 +L E + L AL E++E L+K+ Sbjct: 1557 RSLLENQSLSSSCESLKLALEGLTEDKEKLVKE 1589
>Y1002_CHLCV (P59707) Hypothetical UPF0242 protein CCA01002| Length = 401 Score = 30.0 bits (66), Expect = 3.5 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +3 Query: 162 RAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKD 290 R+V +K K + + EG IA L Q L QL EC EK+ Sbjct: 119 RSVFMKTKADTQRMEGAIAHLREENQCLQLQLDALSQECREKE 161
>KINH_NEUCR (P48467) Kinesin heavy chain| Length = 928 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/59 (28%), Positives = 33/59 (55%) Frame = +3 Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335 E+ +V N++ + K+A LER+L EQL+ + E+++ L K+ +AE ++ Sbjct: 769 EQYNNVLRSSNNRAQQKKMAFLERNL----EQLTQVQRQLVEQNSALKKEVAIAERKLM 823
>KINH_GIBMO (Q86Z98) Kinesin heavy chain| Length = 931 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/59 (28%), Positives = 33/59 (55%) Frame = +3 Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335 E+ +V N++ + K+A LER+L EQL+ + E+++ L K+ +AE ++ Sbjct: 768 EQYNNVLRSSNNRAQQKKMAFLERNL----EQLTQVQRQLVEQNSALKKEVAIAERKLI 822
>KINH_BOTCI (Q86ZC1) Kinesin heavy chain| Length = 880 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/59 (28%), Positives = 32/59 (54%) Frame = +3 Query: 159 ERAVSVKNKPNDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAIL 335 E+ +V N++ + K+A LER+L EQL+ + E++ L K+ +AE ++ Sbjct: 769 EQYNNVLRSSNNRAQQKKMAFLERNL----EQLTHVQRQLVEQNGSLKKEVAIAERKLI 823
>Y1963_THETN (Q8R8N2) Putative hydrolase TTE1963 (EC 3.1.-.-)| Length = 254 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +3 Query: 189 NDKEHEGKIARLERSLQGLNEQLSFAHAECFEKDAILSKQAKVAEEAI 332 N + EG+I ER L+ L+ ++ H ECFE + + K AI Sbjct: 82 NIMDEEGRIDLPERILKKLDIVIASLHDECFEPSEDVERNTKALINAI 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,432,513 Number of Sequences: 219361 Number of extensions: 1261479 Number of successful extensions: 3055 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2987 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3055 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)