ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474123.1| Oryza sativa (japonica cultivar-group), predic... 268 2e-68
2dbj|AK103112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
4emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 149 1e-32
5emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 149 1e-32
6emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4,... 149 1e-32
7gb|AC123067.4| Mus musculus BAC clone RP23-20M6 from chromosome ... 42 1.7
8gb|AC008875.9| Homo sapiens chromosome 5 clone CTD-2201E18, comp... 42 1.7
9gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A... 42 1.7
10emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 42 1.7
11emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 42 1.7
12gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, com... 40 6.7
13gb|AC140274.2| Mus musculus BAC clone RP23-455O6 from chromosome... 40 6.7
14gb|AC147613.2| Mus musculus BAC clone RP23-381J20 from chromosom... 40 6.7
15gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, co... 40 6.7
16emb|AL359956.10| Human DNA sequence from clone RP11-438H17 on ch... 40 6.7
17emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chr... 40 6.7
18emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on ch... 40 6.7
19gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, comp... 40 6.7
20gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complet... 40 6.7
21gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 6.7
22dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.7
23dbj|AP000152.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 6.7
24dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 6.7
25dbj|AP001412.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB... 40 6.7 
>ref|XM_474123.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2751

 Score =  268 bits (135), Expect = 2e-68
 Identities = 248/286 (86%)
 Strand = Plus / Plus

                                                                       
Query: 209 gaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgctca 268
           ||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||||
Sbjct: 99  gaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgctca 158

                                                                       
Query: 269 tgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaagc 328
            ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||||
Sbjct: 159 agctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcagaagaagc 218

                                                                       
Query: 329 catactaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatga 388
            ||| |||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||
Sbjct: 219 aatattaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatga 278

                                                                       
Query: 389 tactctacatgagaaagccatggttgagcanaggattcggcagcttgatgaggctctaaa 448
           ||||||| || ||||||||    ||||||| |||||| | || |||||||||||||||||
Sbjct: 279 tactctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaaa 338

                                                         
Query: 449 tgttgcagcggaagagagggagttattgatgaaggacactgctaaa 494
           ||||||   || |||||||||||||||||| |||||||||||||||
Sbjct: 339 tgttgccatggtagagagggagttattgataaaggacactgctaaa 384



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 127 ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 186
           |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 8   ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 67

                
Query: 187 ccaat 191
           |||||
Sbjct: 68  ccaat 72
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>dbj|AK103112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119E14, full
           insert sequence
          Length = 3116

 Score =  268 bits (135), Expect = 2e-68
 Identities = 248/286 (86%)
 Strand = Plus / Plus

                                                                       
Query: 209 gaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgctca 268
           ||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||||
Sbjct: 204 gaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgctca 263

                                                                       
Query: 269 tgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaagc 328
            ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||||
Sbjct: 264 agctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcagaagaagc 323

                                                                       
Query: 329 catactaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatga 388
            ||| |||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||
Sbjct: 324 aatattaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatga 383

                                                                       
Query: 389 tactctacatgagaaagccatggttgagcanaggattcggcagcttgatgaggctctaaa 448
           ||||||| || ||||||||    ||||||| |||||| | || |||||||||||||||||
Sbjct: 384 tactctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaaa 443

                                                         
Query: 449 tgttgcagcggaagagagggagttattgatgaaggacactgctaaa 494
           ||||||   || |||||||||||||||||| |||||||||||||||
Sbjct: 444 tgttgccatggtagagagggagttattgataaaggacactgctaaa 489



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 127 ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 186
           |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 113 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 172

                
Query: 187 ccaat 191
           |||||
Sbjct: 173 ccaat 177
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 1e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                            
Query: 333      ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 392
                ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 33116977 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 33117036

                                                                            
Query: 393      ctacatgagaaagccatggttgagcanaggattcggcagcttgatgaggctctaaatgtt 452
                ||| || ||||||||    ||||||| |||||| | || |||||||||||||||||||||
Sbjct: 33117037 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaaatgtt 33117096

                                                          
Query: 453      gcagcggaagagagggagttattgatgaaggacactgctaaa 494
                ||   || |||||||||||||||||| |||||||||||||||
Sbjct: 33117097 gccatggtagagagggagttattgataaaggacactgctaaa 33117138



 Score =  129 bits (65), Expect = 9e-27
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                            
Query: 209      gaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgctca 268
                ||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||||
Sbjct: 33116673 gaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgctca 33116732

                                                                            
Query: 269      tgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaagc 328
                 ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||||
Sbjct: 33116733 agctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcagaagaagc 33116792

                         
Query: 329      catactagg 337
                 ||| ||||
Sbjct: 33116793 aatattagg 33116801



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 127      ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 186
                |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 33116493 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 33116552

                     
Query: 187      ccaat 191
                |||||
Sbjct: 33116553 ccaat 33116557
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>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
            sequence
          Length = 118971

 Score =  149 bits (75), Expect = 1e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                        
Query: 333  ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 392
            ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 7808 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 7867

                                                                        
Query: 393  ctacatgagaaagccatggttgagcanaggattcggcagcttgatgaggctctaaatgtt 452
            ||| || ||||||||    ||||||| |||||| | || |||||||||||||||||||||
Sbjct: 7868 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaaatgtt 7927

                                                      
Query: 453  gcagcggaagagagggagttattgatgaaggacactgctaaa 494
            ||   || |||||||||||||||||| |||||||||||||||
Sbjct: 7928 gccatggtagagagggagttattgataaaggacactgctaaa 7969



 Score =  129 bits (65), Expect = 9e-27
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                        
Query: 209  gaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgctca 268
            ||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||||
Sbjct: 7504 gaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgctca 7563

                                                                        
Query: 269  tgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaagc 328
             ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||||
Sbjct: 7564 agctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcggaagaagc 7623

                     
Query: 329  catactagg 337
             ||| ||||
Sbjct: 7624 aatattagg 7632



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 127  ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 186
            |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 7324 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 7383

                 
Query: 187  ccaat 191
            |||||
Sbjct: 7384 ccaat 7388
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>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete
             sequence
          Length = 43586

 Score =  149 bits (75), Expect = 1e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                         
Query: 333   ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 392
             ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 41634 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 41693

                                                                         
Query: 393   ctacatgagaaagccatggttgagcanaggattcggcagcttgatgaggctctaaatgtt 452
             ||| || ||||||||    ||||||| |||||| | || |||||||||||||||||||||
Sbjct: 41694 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaaatgtt 41753

                                                       
Query: 453   gcagcggaagagagggagttattgatgaaggacactgctaaa 494
             ||   || |||||||||||||||||| |||||||||||||||
Sbjct: 41754 gccatggtagagagggagttattgataaaggacactgctaaa 41795



 Score =  129 bits (65), Expect = 9e-27
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                         
Query: 209   gaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgctca 268
             ||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||||
Sbjct: 41330 gaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgctca 41389

                                                                         
Query: 269   tgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaagc 328
              ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||||
Sbjct: 41390 agctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcggaagaagc 41449

                      
Query: 329   catactagg 337
              ||| ||||
Sbjct: 41450 aatattagg 41458



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 127   ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 186
             |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 41150 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 41209

                  
Query: 187   ccaat 191
             |||||
Sbjct: 41210 ccaat 41214
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>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21,
              complete sequence
          Length = 140626

 Score =  149 bits (75), Expect = 1e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                          
Query: 333    ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 392
              ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 126558 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 126617

                                                                          
Query: 393    ctacatgagaaagccatggttgagcanaggattcggcagcttgatgaggctctaaatgtt 452
              ||| || ||||||||    ||||||| |||||| | || |||||||||||||||||||||
Sbjct: 126618 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaaatgtt 126677

                                                        
Query: 453    gcagcggaagagagggagttattgatgaaggacactgctaaa 494
              ||   || |||||||||||||||||| |||||||||||||||
Sbjct: 126678 gccatggtagagagggagttattgataaaggacactgctaaa 126719



 Score =  129 bits (65), Expect = 9e-27
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                          
Query: 209    gaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgctca 268
              ||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||||
Sbjct: 126254 gaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgctca 126313

                                                                          
Query: 269    tgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaagc 328
               ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||||
Sbjct: 126314 agctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcagaagaagc 126373

                       
Query: 329    catactagg 337
               ||| ||||
Sbjct: 126374 aatattagg 126382



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                          
Query: 127    ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 186
              |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 126074 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 126133

                   
Query: 187    ccaat 191
              |||||
Sbjct: 126134 ccaat 126138
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>gb|AC123067.4| Mus musculus BAC clone RP23-20M6 from chromosome 12, complete sequence
          Length = 200251

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 130    aaacatggctttggagaaagaaagc 154
              ||||||||||||||| |||||||||
Sbjct: 162456 aaacatggctttggaaaaagaaagc 162480
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>gb|AC008875.9| Homo sapiens chromosome 5 clone CTD-2201E18, complete sequence
          Length = 167100

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 343    agaaagcagaggctgaagcta 363
              |||||||||||||||||||||
Sbjct: 128738 agaaagcagaggctgaagcta 128758
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>gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A15, complete sequence
          Length = 193254

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 343   agaaagcagaggctgaagcta 363
             |||||||||||||||||||||
Sbjct: 15352 agaaagcagaggctgaagcta 15372
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 304     agcaagcaaaagtagctgaag 324
               |||||||||||||||||||||
Sbjct: 1127473 agcaagcaaaagtagctgaag 1127493
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 304     agcaagcaaaagtagctgaag 324
               |||||||||||||||||||||
Sbjct: 1304251 agcaagcaaaagtagctgaag 1304231
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>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence
          Length = 161504

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ggcagagccactgccattca 53
              ||||||||||||||||||||
Sbjct: 124178 ggcagagccactgccattca 124159
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>gb|AC140274.2| Mus musculus BAC clone RP23-455O6 from chromosome 7, complete sequence
          Length = 186562

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    taaatgaacaactttcattt 263
              ||||||||||||||||||||
Sbjct: 136922 taaatgaacaactttcattt 136903
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>gb|AC147613.2| Mus musculus BAC clone RP23-381J20 from chromosome 7, complete sequence
          Length = 188914

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    taaatgaacaactttcattt 263
              ||||||||||||||||||||
Sbjct: 142527 taaatgaacaactttcattt 142546
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>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence
          Length = 278715

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    gctttggagaaagaaagcat 156
              ||||||||||||||||||||
Sbjct: 219645 gctttggagaaagaaagcat 219626
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>emb|AL359956.10| Human DNA sequence from clone RP11-438H17 on chromosome X, complete
            sequence
          Length = 62570

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  ggagaaagcagaggctgaag 360
            ||||||||||||||||||||
Sbjct: 6339 ggagaaagcagaggctgaag 6320
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>emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chromosome 6 Contains the
             TRIP7 gene for thyroid hormone receptor interactor 7, a
             ribosomal protein S18 (RPS18) pseudogene and part of a
             novel gene, complete sequence
          Length = 152086

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   cttaaatgaacaactttcat 261
             ||||||||||||||||||||
Sbjct: 25664 cttaaatgaacaactttcat 25683
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>emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on chromosome Xp11.3-21.2
             Contains part of the CASK gene for
             calcium/calmodulin-dependent serine protein kinase (MAGUK
             family) and a ribosomal protein S15a (RPS15A) pseudogene,
             complete sequence
          Length = 106605

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ctttggagaaagaaagcatc 157
             ||||||||||||||||||||
Sbjct: 34902 ctttggagaaagaaagcatc 34921
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>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence
          Length = 110295

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   atgatactctacatgagaaa 404
             ||||||||||||||||||||
Sbjct: 51723 atgatactctacatgagaaa 51704
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>gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complete sequence
          Length = 74521

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ggcagagccactgccattca 53
             ||||||||||||||||||||
Sbjct: 18112 ggcagagccactgccattca 18131
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 385     atgatactctacatgagaaa 404
               ||||||||||||||||||||
Sbjct: 1144346 atgatactctacatgagaaa 1144327
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>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    acatgaggggaagattgcac 219
              ||||||||||||||||||||
Sbjct: 165444 acatgaggggaagattgcac 165425
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>dbj|AP000152.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 4/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   acatgaggggaagattgcac 219
             ||||||||||||||||||||
Sbjct: 34861 acatgaggggaagattgcac 34842
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>dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 3/13
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   acatgaggggaagattgcac 219
             ||||||||||||||||||||
Sbjct: 82516 acatgaggggaagattgcac 82497
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>dbj|AP001412.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region,
             clone:D10
          Length = 67050

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   acatgaggggaagattgcac 219
             ||||||||||||||||||||
Sbjct: 30813 acatgaggggaagattgcac 30794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,052,101
Number of Sequences: 3902068
Number of extensions: 5052101
Number of successful extensions: 96314
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96194
Number of HSP's gapped (non-prelim): 114
length of query: 495
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 473
effective length of database: 17,147,199,772
effective search space: 8110625492156
effective search space used: 8110625492156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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