Clone Name | bastl54h11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 214 gcccgagatgcaccatgcgatgcggttgcgctgcctcctc 253 |||||||||| || | ||||||||| |||||||||||||| Sbjct: 31491443 gcccgagatgtactacgcgatgcggctgcgctgcctcctc 31491482
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 214 gcccgagatgcaccatgcgatgcggttgcgctgcctcctc 253 |||||||||| || | ||||||||| |||||||||||||| Sbjct: 126840 gcccgagatgtactacgcgatgcggctgcgctgcctcctc 126879
>dbj|AK108296.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E06, full insert sequence Length = 787 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Minus Query: 214 gcccgagatgcaccatgcgatgcggttgcgctgcctcctc 253 |||||||||| || | ||||||||| |||||||||||||| Sbjct: 406 gcccgagatgtactacgcgatgcggctgcgctgcctcctc 367
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gcctcctccagcacccgccgc 266 ||||||||||||||||||||| Sbjct: 131706 gcctcctccagcacccgccgc 131686
>ref|NM_189389.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cctcctccagcacccgccgc 266 |||||||||||||||||||| Sbjct: 69 cctcctccagcacccgccgc 88
>emb|AL035413.19|HS657E11 Human DNA sequence from clone RP4-657E11 on chromosome 1p35.1-36.23 Contains the 5' end of a novel gene, the C1orf33 gene for chromosome 1 open reading frame 33, four novel genes, the AKR7A3 gene for aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase), the AKR7A2 gene for aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase), the 3' end of the CAPZB gene for capping protein (actin filament) muscle Z-line, beta and two CpG islands, complete sequence Length = 154130 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctgcctcctccagcacccgc 263 |||||||||||||||||||| Sbjct: 82647 ctgcctcctccagcacccgc 82628
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cctcctccagcacccgccgc 266 |||||||||||||||||||| Sbjct: 42540127 cctcctccagcacccgccgc 42540146
>emb|BX816872.1|CNS0AD5E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1276 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gtcgcggccggtcacgcgcc 62 |||||||||||||||||||| Sbjct: 146 gtcgcggccggtcacgcgcc 127
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cctcctccagcacccgccgc 266 |||||||||||||||||||| Sbjct: 61010 cctcctccagcacccgccgc 61029
>gb|AC140213.2| Mus musculus BAC clone RP23-270L5 from 7, complete sequence Length = 195922 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctccgtctccctcccctccg 43 |||||||||||||||||||| Sbjct: 91167 ctccgtctccctcccctccg 91148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,655,228 Number of Sequences: 3902068 Number of extensions: 1655228 Number of successful extensions: 34962 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34918 Number of HSP's gapped (non-prelim): 44 length of query: 335 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 313 effective length of database: 17,147,199,772 effective search space: 5367073528636 effective search space used: 5367073528636 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)