>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III|
          Length = 902

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 37/85 (43%), Positives = 52/85 (61%)
 Frame = +3

Query: 171 IFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKKIRA 350
           I+ PFR+IG+++   VPF ++  GT   VT SVG  F  Y+C KL L+  G QL K+I  
Sbjct: 23  IYAPFRSIGHVSNA-VPFDIEARGTHFLVTTSVGNTFQTYDCEKLNLLFVGKQLDKEITC 81

Query: 351 LASFKEYTFAAYGSDIAVFKRTDLV 425
           L SFK++   A GS I  +KR  ++
Sbjct: 82  LKSFKDFMLVAAGSKIFAYKRGKII 106

>YL409_YEAST (Q06078) Hypothetical 104.8 kDa Trp-Asp repeats-containing protein|
           in RPL31B-VIP1 intergenic region
          Length = 939

 Score = 58.5 bits (140), Expect = 6e-09
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +3

Query: 171 IFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLV-LAGPQLPKKIR 347
           IF PFR IG ++ G VPF+   LG+  ++   VGK F +Y+   L L+ ++  + P  I 
Sbjct: 23  IFSPFRIIGNVSNG-VPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIV 81

Query: 348 ALASFKEYTFAAYGSDIAVFKR 413
           AL++   Y +AAY + + ++KR
Sbjct: 82  ALSAHFHYVYAAYENKVGIYKR 103

>WDR36_HUMAN (Q8NI36) WD repeat-containing protein 36 (T-cell activation WD|
           repeat-containing protein) (TA-WDRP)
          Length = 951

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = +3

Query: 171 IFEPFRAIGYITTGGVPFSLQ--RLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKKI 344
           +F  FRA+G + +  +P  ++   L    +VT  VGK+FH Y+  KL+LV     +P+ I
Sbjct: 69  LFAGFRALG-LFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQDI 127

Query: 345 RALASFKEYTFAAYGSDIAVFKRTDLVV 428
             +A+     FAAYG+  + F R   +V
Sbjct: 128 CCMAADGRLVFAAYGNVFSAFARNKEIV 155

>TLR9_HUMAN (Q9NR96) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1032

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 319 PDLNCPRRSAPLHPSRNTHLLRTEAISRFSNGLIW 423
           P + CPR    LHP   +HL R E +    + L W
Sbjct: 264 PCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSW 298

>MOT2_MESAU (P53988) Monocarboxylate transporter 2 (MCT 2)|
          Length = 484

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +3

Query: 171 IFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKKIRA 350
           + E +  IG+I   G+ F+LQ   T       +GK F+        L +AG   P  + +
Sbjct: 110 VLELYLTIGFIGGLGLAFNLQPALT------IIGKYFYRRRPMANGLAMAGS--PVFLSS 161

Query: 351 LASFKEYTFAAYG 389
           LA F +Y F +YG
Sbjct: 162 LAPFNQYLFNSYG 174

>Y111_METJA (Q57575) Hypothetical protein MJ0111|
          Length = 396

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 213 GVPFSLQRLGTETFVTVSVGKAFH 284
           GVPF L   G + F  V+ GKA+H
Sbjct: 141 GVPFELTLEGAKKFAEVAKGKAYH 164

>SYN_XYLFT (Q87A82) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 466

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +3

Query: 207 TGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGP 326
           TGG+ FS    G ETF+TVS       Y  A   +   GP
Sbjct: 192 TGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGP 231

>SYN_XYLFA (Q9PAF5) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 466

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +3

Query: 207 TGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGP 326
           TGG+ FS    G ETF+TVS       Y  A   +   GP
Sbjct: 192 TGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGP 231

>TRUD_METMA (Q8Q0M2) Probable tRNA pseudouridine synthase D (EC 5.4.99.-)|
           (tRNA-uridine isomerase D) (tRNA pseudouridylate
           synthase D)
          Length = 438

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 201 ITTGGVP--FSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKK 341
           +  GGVP  F +QR G+   VT  VGKA    N  K  L+      P++
Sbjct: 161 LAQGGVPNFFGIQRFGSVRPVTHLVGKAIVEGNFEKAALLYIAEPFPEE 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,742,750
Number of Sequences: 219361
Number of extensions: 502475
Number of successful extensions: 1353
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)