Clone Name | bastl54h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CN032_MOUSE (Q8BH93) Protein C14orf32 homolog | 32 | 0.91 | 2 | UL14_HHV11 (P04291) Hypothetical UL14 protein | 29 | 7.7 | 3 | SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-rel... | 29 | 7.7 |
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>CN032_MOUSE (Q8BH93) Protein C14orf32 homolog| Length = 242 Score = 32.0 bits (71), Expect = 0.91 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 202 PSPSPWEAPASDPEMASGLADSSDDPS 122 P SPW P++ P M SGL SS PS Sbjct: 35 PGSSPWSNPSAPPAMPSGLPPSSAAPS 61
>UL14_HHV11 (P04291) Hypothetical UL14 protein| Length = 219 Score = 28.9 bits (63), Expect = 7.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 202 PSPSPWEAPASDPEMASGLADSSDD 128 PSP+P PA+DP ASG A D Sbjct: 193 PSPAPPTGPATDPASASGFARDYPD 217
>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)| Length = 1268 Score = 28.9 bits (63), Expect = 7.7 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Frame = -1 Query: 316 EETASCGLDVTSSTRLS---------LEGNMLADTVSTNSLCVVPRVPSPSPWEAPASDP 164 EE G+D +S+T + LEG D +S+++ P P+P PAS P Sbjct: 383 EEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSPAP---DPAPEPDPASAP 439 Query: 163 EMASGLADSSDDPSR 119 AS A PS+ Sbjct: 440 APASAPAPVVPQPSK 454 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,036,725 Number of Sequences: 219361 Number of extensions: 1134709 Number of successful extensions: 3832 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3628 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3819 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)