ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl54g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3125 Score = 186 bits (94), Expect = 4e-44 Identities = 141/157 (89%) Strand = Plus / Plus Query: 269 agcggcagcacggttttcaagagtggacctctcttcatatcatccaaaggacttggatgg 328 ||||||| | |||| || |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 342 agcggcaacgcggtatttaagagtggccctctcttcatatcatccaaaggaattggatgg 401 Query: 329 aaatcatggaaaaaacgctggttcatcctcacccgagcatcattagttntcttcaagagc 388 |||||||||||||| || |||||||||||||| ||| ||||| | ||| ||||||||||| Sbjct: 402 aaatcatggaaaaagcgttggttcatcctcactcgaacatcacttgttttcttcaagagc 461 Query: 389 gatcttaataccttgccccagagaagtggtgaagtga 425 || | ||||||||||||||||||| |||||||||||| Sbjct: 462 gaccctaataccttgccccagagaggtggtgaagtga 498
>dbj|AK103870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149H24, full insert sequence Length = 3125 Score = 186 bits (94), Expect = 4e-44 Identities = 141/157 (89%) Strand = Plus / Plus Query: 269 agcggcagcacggttttcaagagtggacctctcttcatatcatccaaaggacttggatgg 328 ||||||| | |||| || |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 342 agcggcaacgcggtatttaagagtggccctctcttcatatcatccaaaggaattggatgg 401 Query: 329 aaatcatggaaaaaacgctggttcatcctcacccgagcatcattagttntcttcaagagc 388 |||||||||||||| || |||||||||||||| ||| ||||| | ||| ||||||||||| Sbjct: 402 aaatcatggaaaaagcgttggttcatcctcactcgaacatcacttgttttcttcaagagc 461 Query: 389 gatcttaataccttgccccagagaagtggtgaagtga 425 || | ||||||||||||||||||| |||||||||||| Sbjct: 462 gaccctaataccttgccccagagaggtggtgaagtga 498
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 89.7 bits (45), Expect = 7e-15 Identities = 68/76 (89%) Strand = Plus / Plus Query: 315 aaggacttggatggaaatcatggaaaaaacgctggttcatcctcacccgagcatcattag 374 ||||| |||||||||||||||||||||| || |||||||||||||| ||| ||||| | | Sbjct: 27661201 aaggaattggatggaaatcatggaaaaagcgttggttcatcctcactcgaacatcacttg 27661260 Query: 375 ttntcttcaagagcga 390 || ||||||||||||| Sbjct: 27661261 ttttcttcaagagcga 27661276 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 287 aagagtggacctctcttcatatcatccaaagg 318 |||||||| ||||||||||||||||||||||| Sbjct: 27661090 aagagtggccctctcttcatatcatccaaagg 27661121 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 aataccttgccccagagaagtggtgaagtga 425 |||||||||||||||||| |||||||||||| Sbjct: 27662272 aataccttgccccagagaggtggtgaagtga 27662302 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggcggcgaggaggacgacg 185 |||||||||||||||||||| Sbjct: 1848113 cggcggcgaggaggacgacg 1848132
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 89.7 bits (45), Expect = 7e-15 Identities = 68/76 (89%) Strand = Plus / Plus Query: 315 aaggacttggatggaaatcatggaaaaaacgctggttcatcctcacccgagcatcattag 374 ||||| |||||||||||||||||||||| || |||||||||||||| ||| ||||| | | Sbjct: 118194 aaggaattggatggaaatcatggaaaaagcgttggttcatcctcactcgaacatcacttg 118253 Query: 375 ttntcttcaagagcga 390 || ||||||||||||| Sbjct: 118254 ttttcttcaagagcga 118269 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 287 aagagtggacctctcttcatatcatccaaagg 318 |||||||| ||||||||||||||||||||||| Sbjct: 118083 aagagtggccctctcttcatatcatccaaagg 118114 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 aataccttgccccagagaagtggtgaagtga 425 |||||||||||||||||| |||||||||||| Sbjct: 119265 aataccttgccccagagaggtggtgaagtga 119295
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 89.7 bits (45), Expect = 7e-15 Identities = 68/76 (89%) Strand = Plus / Plus Query: 315 aaggacttggatggaaatcatggaaaaaacgctggttcatcctcacccgagcatcattag 374 ||||| |||||||||||||||||||||| || |||||||||||||| ||| ||||| | | Sbjct: 40303 aaggaattggatggaaatcatggaaaaagcgttggttcatcctcactcgaacatcacttg 40362 Query: 375 ttntcttcaagagcga 390 || ||||||||||||| Sbjct: 40363 ttttcttcaagagcga 40378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 287 aagagtggacctctcttcatatcatccaaagg 318 |||||||| ||||||||||||||||||||||| Sbjct: 40192 aagagtggccctctcttcatatcatccaaagg 40223 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 395 aataccttgccccagagaagtggtgaagtga 425 |||||||||||||||||| |||||||||||| Sbjct: 41374 aataccttgccccagagaggtggtgaagtga 41404
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 87.7 bits (44), Expect = 3e-14 Identities = 61/67 (91%) Strand = Plus / Minus Query: 326 tggaaatcatggaaaaaacgctggttcatcctcacccgagcatcattagttntcttcaag 385 |||||||||||||||||||| |||||||||||||| ||| ||||||| ||| |||||||| Sbjct: 37193 tggaaatcatggaaaaaacggtggttcatcctcacacgaacatcattggttttcttcaag 37134 Query: 386 agcgatc 392 || |||| Sbjct: 37133 agtgatc 37127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gggatgtcgtccgcgccggcgccaggtggggcgttcgaccg 228 ||||||||||||||||||||| | || |||||||||||||| Sbjct: 39518 gggatgtcgtccgcgccggcggcgggcggggcgttcgaccg 39478 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 280 ggttttcaagagtggacctctcttcatatcatc 312 ||||||||||||||||||||||||||| ||||| Sbjct: 37976 ggttttcaagagtggacctctcttcatttcatc 37944 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 397 taccttgccccagagaagtggtgaagtgagtgctactct 435 |||||||||||||||| |||||||||||| || |||||| Sbjct: 36507 taccttgccccagagaggtggtgaagtgaatgttactct 36469
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 87.7 bits (44), Expect = 3e-14 Identities = 61/67 (91%) Strand = Plus / Minus Query: 326 tggaaatcatggaaaaaacgctggttcatcctcacccgagcatcattagttntcttcaag 385 |||||||||||||||||||| |||||||||||||| ||| ||||||| ||| |||||||| Sbjct: 116092 tggaaatcatggaaaaaacggtggttcatcctcacacgaacatcattggttttcttcaag 116033 Query: 386 agcgatc 392 || |||| Sbjct: 116032 agtgatc 116026 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gggatgtcgtccgcgccggcgccaggtggggcgttcgaccg 228 ||||||||||||||||||||| | || |||||||||||||| Sbjct: 118417 gggatgtcgtccgcgccggcggcgggcggggcgttcgaccg 118377 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 280 ggttttcaagagtggacctctcttcatatcatc 312 ||||||||||||||||||||||||||| ||||| Sbjct: 116875 ggttttcaagagtggacctctcttcatttcatc 116843 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 397 taccttgccccagagaagtggtgaagtgagtgctactct 435 |||||||||||||||| |||||||||||| || |||||| Sbjct: 115406 taccttgccccagagaggtggtgaagtgaatgttactct 115368
>ref|NM_121944.2| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.2 mRNA, complete cds Length = 3235 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||||||||||||| || || ||||||||||| |||||| | || |||| || ||| Sbjct: 413 acggttttcaagagtggtccacttttcatatcatctaaaggattgggttggacgtcttgg 472 Query: 338 aaaaaacgctggttcatcctcac 360 || |||||||||||||||||||| Sbjct: 473 aagaaacgctggttcatcctcac 495
>ref|NM_001036828.1| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.4 mRNA, complete cds Length = 2690 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||||||||||||| || || ||||||||||| |||||| | || |||| || ||| Sbjct: 418 acggttttcaagagtggtccacttttcatatcatctaaaggattgggttggacgtcttgg 477 Query: 338 aaaaaacgctggttcatcctcac 360 || |||||||||||||||||||| Sbjct: 478 aagaaacgctggttcatcctcac 500
>ref|NM_001036827.1| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.3 mRNA, complete cds Length = 3249 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||||||||||||| || || ||||||||||| |||||| | || |||| || ||| Sbjct: 418 acggttttcaagagtggtccacttttcatatcatctaaaggattgggttggacgtcttgg 477 Query: 338 aaaaaacgctggttcatcctcac 360 || |||||||||||||||||||| Sbjct: 478 aagaaacgctggttcatcctcac 500
>ref|NM_180711.2| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.1 mRNA, complete cds Length = 3182 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||||||||||||| || || ||||||||||| |||||| | || |||| || ||| Sbjct: 344 acggttttcaagagtggtccacttttcatatcatctaaaggattgggttggacgtcttgg 403 Query: 338 aaaaaacgctggttcatcctcac 360 || |||||||||||||||||||| Sbjct: 404 aagaaacgctggttcatcctcac 426
>gb|AY091776.1| Arabidopsis thaliana AT5g19390/F7K24_140 mRNA, complete cds Length = 3235 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||||||||||||| || || ||||||||||| |||||| | || |||| || ||| Sbjct: 413 acggttttcaagagtggtccacttttcatatcatctaaaggattgggttggacgtcttgg 472 Query: 338 aaaaaacgctggttcatcctcac 360 || |||||||||||||||||||| Sbjct: 473 aagaaacgctggttcatcctcac 495
>gb|BT002224.1| Arabidopsis thaliana At5g19390/F7K24_140 mRNA, complete cds Length = 2613 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||||||||||||| || || ||||||||||| |||||| | || |||| || ||| Sbjct: 52 acggttttcaagagtggtccacttttcatatcatctaaaggattgggttggacgtcttgg 111 Query: 338 aaaaaacgctggttcatcctcac 360 || |||||||||||||||||||| Sbjct: 112 aagaaacgctggttcatcctcac 134
>ref|NM_121253.3| Arabidopsis thaliana unknown protein AT5G12150 mRNA, complete cds Length = 2954 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||| |||||||| ||||||||||||||||| |||||||| || |||| ||| ||| Sbjct: 257 acggtttataagagtggccctctcttcatatcatcaaaaggactaggttggacatcctgg 316 Query: 338 aaaaaacgctggttcatcctcacccga 364 || || || ||||| ||||| |||||| Sbjct: 317 aagaagcgttggtttatccttacccga 343
>gb|AY065176.1| Arabidopsis thaliana unknown protein (At5g12150; MXC9.11) mRNA, complete cds Length = 2829 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 278 acggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaatcatgg 337 ||||||| |||||||| ||||||||||||||||| |||||||| || |||| ||| ||| Sbjct: 255 acggtttataagagtggccctctcttcatatcatcaaaaggactaggttggacatcctgg 314 Query: 338 aaaaaacgctggttcatcctcacccga 364 || || || ||||| ||||| |||||| Sbjct: 315 aagaagcgttggtttatccttacccga 341
>emb|BX832723.1|CNS09YW2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH92ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2733 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 288 agagtggacctctcttcatatcatccaaaggacttggatggaaatcatggaaaaaacgct 347 ||||||| ||||||||||||||||| | |||||| || |||| ||| ||||| || || | Sbjct: 248 agagtggccctctcttcatatcatcaagaggactaggttggacatcctggaagaagcgtt 307 Query: 348 ggttcatcctcacccga 364 |||| ||||| |||||| Sbjct: 308 ggtttatccttacccga 324
>ref|NM_118591.2| Arabidopsis thaliana Rho GTPase activator AT4G24580 mRNA, complete cds Length = 2709 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Plus Query: 272 ggcagcacggttttcaagagtggacctctcttcatatcatccaaaggacttggatggaaa 331 |||| ||||||||||||||||||||| || | ||||| || ||||| |||| |||| | Sbjct: 172 ggcaacacggttttcaagagtggaccgctatctatatcttcaaaagggattggctggaca 231 Query: 332 tcatggaa 339 |||||||| Sbjct: 232 tcatggaa 239
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||||||||||| Sbjct: 2535096 ggcggcggcgaggaggacgacgag 2535073 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||| ||||||| Sbjct: 26801897 ggcggcggcgaggagggcgacgag 26801874
>dbj|AB007727.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC9 Length = 79590 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 287 aagagtggacctctcttcatatcatccaaagg 318 |||||||| ||||||||||||||||| ||||| Sbjct: 38244 aagagtggccctctcttcatatcatcaaaagg 38213
>dbj|AK107301.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C09, full insert sequence Length = 1507 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||||||||||| Sbjct: 120 ggcggcggcgaggaggacgacgag 97
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||||||||||| Sbjct: 2535040 ggcggcggcgaggaggacgacgag 2535017 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||| ||||||| Sbjct: 26730067 ggcggcggcgaggagggcgacgag 26730044
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||||||||||| Sbjct: 132913 ggcggcggcgaggaggacgacgag 132936
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||||||||||| Sbjct: 8396 ggcggcggcgaggaggacgacgag 8419
>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence Length = 134901 Score = 46.1 bits (23), Expect = 0.097 Identities = 52/62 (83%) Strand = Plus / Minus Query: 323 ggatggaaatcatggaaaaaacgctggttcatcctcacccgagcatcattagttntcttc 382 ||||||||||||||||| || || ||||| || ||||| || ||||||| ||| ||||| Sbjct: 6086 ggatggaaatcatggaagaagcggtggtttatactcacacgcacatcattggttttcttc 6027 Query: 383 aa 384 || Sbjct: 6026 aa 6025
>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 Length = 103024 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 280 ggttttcaagagtggacctctcttcatatcatccaaagg 318 ||||||||||||||| || || ||||||||||| ||||| Sbjct: 59628 ggttttcaagagtggtccacttttcatatcatctaaagg 59666 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 335 tggaaaaaacgctggttcatcctcac 360 ||||| |||||||||||||||||||| Sbjct: 59813 tggaagaaacgctggttcatcctcac 59838
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacg 185 |||||||||||||||||||||| Sbjct: 100893 ggcggcggcgaggaggacgacg 100872
>gb|AC146524.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055H15, complete sequence Length = 28312 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 gcgcggtggcggtgccggcgtc 267 |||||||||||||||||||||| Sbjct: 19847 gcgcggtggcggtgccggcgtc 19826
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 gcgcggtggcggtgccggcgtc 267 |||||||||||||||||||||| Sbjct: 131795 gcgcggtggcggtgccggcgtc 131816
>gb|AE011975.1| Xanthomonas axonopodis pv. citri str. 306, section 353 of 469 of the complete genome Length = 12826 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 ggcgccaggtggggcgttcgac 226 |||||||||||||||||||||| Sbjct: 10206 ggcgccaggtggggcgttcgac 10185
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacg 185 |||||||||||||||||||||| Sbjct: 273634 ggcggcggcgaggaggacgacg 273613 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacgagg 188 |||||||||||||||||| ||||| Sbjct: 309158 gcggcggcgaggaggacggcgagg 309135
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 gcgcggtggcggtgccggcgtc 267 |||||||||||||||||||||| Sbjct: 7050760 gcgcggtggcggtgccggcgtc 7050739
>dbj|AK105440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H10, full insert sequence Length = 2323 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 gcgcggtggcggtgccggcgtc 267 |||||||||||||||||||||| Sbjct: 272 gcgcggtggcggtgccggcgtc 293
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 gcgcggtggcggtgccggcgtc 267 |||||||||||||||||||||| Sbjct: 7116731 gcgcggtggcggtgccggcgtc 7116710
>ref|XM_476051.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3372 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacgaggg 189 ||||| ||||||||||||||||||| Sbjct: 2183 gcggccgcgaggaggacgacgaggg 2159
>ref|NM_187581.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1629 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cggcgaggaggacgacgaggg 189 ||||||||||||||||||||| Sbjct: 50 cggcgaggaggacgacgaggg 70
>ref|XM_466439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacg 185 ||||||||||||||||||||| Sbjct: 164 gcggcggcgaggaggacgacg 144
>ref|XM_450622.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1545 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 gaggcggcggcgaggaggacg 182 ||||||||||||||||||||| Sbjct: 227 gaggcggcggcgaggaggacg 207
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacgaggg 189 ||||| ||||||||||||||||||| Sbjct: 2530 gcggccgcgaggaggacgacgaggg 2506
>ref|XM_958799.1| Neurospora crassa OR74A hypothetical protein (NCU03046.1) partial mRNA Length = 2613 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ctgaggcggcggcgaggagga 180 ||||||||||||||||||||| Sbjct: 2336 ctgaggcggcggcgaggagga 2356
>ref|XM_330232.1| Neurospora crassa OR74A hypothetical protein (NCU03046.1) partial mRNA Length = 2613 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ctgaggcggcggcgaggagga 180 ||||||||||||||||||||| Sbjct: 2336 ctgaggcggcggcgaggagga 2356
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cggcgaggaggacgacgaggg 189 ||||||||||||||||||||| Sbjct: 1498582 cggcgaggaggacgacgaggg 1498562
>ref|XM_843730.1| PREDICTED: Canis familiaris hypothetical protein LOC607128 (LOC607128), mRNA Length = 2058 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 16 ggcggcggcgaggaggacgac 36
>gb|BC051771.1| Homo sapiens hypothetical protein FLJ30707, mRNA (cDNA clone MGC:54320 IMAGE:5722982), complete cds Length = 4263 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 102 ggcggcggcgaggaggacgac 122
>emb|AL157817.13| Human DNA sequence from clone RP11-457D13 on chromosome 13q14.2-21.1 Contains a 60S ribosomal protein 5 (RPL5) pseudogene, a novel gene and a CpG island, complete sequence Length = 176148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 95694 ggcggcggcgaggaggacgac 95714
>gb|BC034497.2| Homo sapiens hypothetical protein FLJ30707, mRNA (cDNA clone IMAGE:4836906), complete cds Length = 2398 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 187 ggcggcggcgaggaggacgac 207
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacgaggg 189 ||||| ||||||||||||||||||| Sbjct: 90745 gcggccgcgaggaggacgacgaggg 90721
>emb|CR859171.1| Pongo pygmaeus mRNA; cDNA DKFZp459K1128 (from clone DKFZp459K1128) Length = 4219 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 66 ggcggcggcgaggaggacgac 86
>dbj|AK096364.1| Homo sapiens cDNA FLJ39045 fis, clone NT2RP7010521 Length = 2104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 150 ggcggcggcgaggaggacgac 170
>dbj|AK055269.1| Homo sapiens cDNA FLJ30707 fis, clone FCBBF2001211 Length = 2002 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 154 ggcggcggcgaggaggacgac 174
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cggcgaggaggacgacgaggg 189 ||||||||||||||||||||| Sbjct: 35755 cggcgaggaggacgacgaggg 35735
>gb|AC162174.4| Mus musculus chromosome 1, clone RP23-306P24, complete sequence Length = 211734 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gcttattgctgctgctgtagc 120 ||||||||||||||||||||| Sbjct: 89706 gcttattgctgctgctgtagc 89686
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gaggcggcggcgaggaggacg 182 ||||||||||||||||||||| Sbjct: 11858727 gaggcggcggcgaggaggacg 11858747
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacgaggg 189 ||||| ||||||||||||||||||| Sbjct: 4116051 gcggccgcgaggaggacgacgaggg 4116027
>ref|XM_624714.1| PREDICTED: Apis mellifera similar to ENSANGP00000016859 (LOC552338), mRNA Length = 864 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gcggcggcgaggaggacgacgaggg 189 |||||||||| |||||||||||||| Sbjct: 209 gcggcggcgacgaggacgacgaggg 233
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cggcgaggaggacgacgaggg 189 ||||||||||||||||||||| Sbjct: 1498580 cggcgaggaggacgacgaggg 1498560
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacg 185 ||||||||||||||||||||| Sbjct: 22645830 gcggcggcgaggaggacgacg 22645810 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ggcggcgaggaggacgacga 186 |||||||||||||||||||| Sbjct: 15610349 ggcggcgaggaggacgacga 15610330
>ref|NM_145019.2| Homo sapiens hypothetical protein FLJ30707 (FLJ30707), mRNA Length = 2104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgac 184 ||||||||||||||||||||| Sbjct: 150 ggcggcggcgaggaggacgac 170
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gaggcggcggcgaggaggacg 182 ||||||||||||||||||||| Sbjct: 40217 gaggcggcggcgaggaggacg 40237
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gaggcggcggcgaggaggacg 182 ||||||||||||||||||||| Sbjct: 101545 gaggcggcggcgaggaggacg 101565
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacg 185 ||||||||||||||||||||| Sbjct: 93641 gcggcggcgaggaggacgacg 93621
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacg 185 ||||||||||||||||||||| Sbjct: 4626 gcggcggcgaggaggacgacg 4606
>dbj|AK111628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119F12, full insert sequence Length = 1545 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 gaggcggcggcgaggaggacg 182 ||||||||||||||||||||| Sbjct: 227 gaggcggcggcgaggaggacg 207
>dbj|AK062460.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-D05, full insert sequence Length = 775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gcggcggcgaggaggacgacg 185 ||||||||||||||||||||| Sbjct: 164 gcggcggcgaggaggacgacg 144
>gb|AC139368.10| Mus musculus chromosome 1, clone RP24-534C15, complete sequence Length = 166278 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gcttattgctgctgctgtagc 120 ||||||||||||||||||||| Sbjct: 146879 gcttattgctgctgctgtagc 146859
>dbj|AB085745.1| Streptomyces griseus orf1, orf2, sgmA, orf4 genes for putative mono-oxygenase, hypothetical protein, metalloendopeptidase, possible secreted protein, partial and complete cds Length = 5194 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 235 ccagcgcggc-agcgcggtggcggtgccg 262 |||||||||| |||||||||||||||||| Sbjct: 5136 ccagcgcggcgagcgcggtggcggtgccg 5164
>ref|NM_119756.2| Arabidopsis thaliana FD (FD); DNA binding / transcription factor AT4G35900 (FD) mRNA, complete cds Length = 1311 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 444 accacaaccaaaaccctaac 463
>ref|XM_471043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaggacgacgaggggat 192 |||||||||||||||||||| Sbjct: 946 gaggaggacgacgaggggat 965
>ref|XM_476541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3072 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggcggcgaggaggacgacg 185 |||||||||||||||||||| Sbjct: 46 cggcggcgaggaggacgacg 27
>gb|AF394559.1| Oryza sativa alpha-expansin OsEXPA24 (EXPA24) gene, complete cds Length = 4189 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gtccgcgccggcgccaggtg 215 |||||||||||||||||||| Sbjct: 343 gtccgcgccggcgccaggtg 324
>ref|XM_541687.2| PREDICTED: Canis familiaris similar to sorting nexin 26 (LOC484573), mRNA Length = 2822 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 ggcggcggcgaggaggacgacgag 187 ||||||||||| |||||||||||| Sbjct: 11 ggcggcggcgacgaggacgacgag 34
>gb|DQ446900.1| Arabidopsis thaliana clone pENTR221-At4g35900 DNA-binding protein-like protein (At4g35900) mRNA, complete cds Length = 734 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 293 accacaaccaaaaccctaac 312
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cagcgcggtggcggtgccgg 263 |||||||||||||||||||| Sbjct: 4043690 cagcgcggtggcggtgccgg 4043671
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cgcggtggcggtgccggcgt 266 |||||||||||||||||||| Sbjct: 1969719 cgcggtggcggtgccggcgt 1969700
>emb|AL161436.12| Human DNA sequence from clone RP11-377N20 on chromosome 6 Contains part of a novel gene, complete sequence Length = 124814 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaccacaaccaaaacccta 20 |||||||||||||||||||| Sbjct: 34188 aaaccacaaccaaaacccta 34207
>gb|BT009384.1| Triticum aestivum clone wlm96.pk033.h5:fis, full insert mRNA sequence Length = 2653 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggcggcgaggaggacgacg 185 |||||||||||||||||||| Sbjct: 554 cggcggcgaggaggacgacg 573
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaggacgacgaggggat 192 |||||||||||||||||||| Sbjct: 65061 gaggaggacgacgaggggat 65080
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 76796 accacaaccaaaaccctaac 76815
>emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BAC clone T19K4 (ESSAII project) Length = 106007 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 11527 accacaaccaaaaccctaac 11546
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 ccagcgcggcagcgcggtggcggtgccg 262 ||||||| ||||||||||||||| |||| Sbjct: 2372012 ccagcgctgcagcgcggtggcggcgccg 2372039
>gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21, complete sequence Length = 141874 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggcggcgaggagtccggtcc 144 |||||||||||||||||||| Sbjct: 38271 ggcggcgaggagtccggtcc 38290
>gb|AC158604.5| Mus musculus 10 BAC RP23-130B2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190024 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aggacttggatggaaatcat 335 |||||||||||||||||||| Sbjct: 29201 aggacttggatggaaatcat 29182
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgaggaggacgacgagggg 190 |||||||||||||||||||| Sbjct: 80250 gcgaggaggacgacgagggg 80231
>dbj|AB105822.1| Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Wassilewskija Length = 858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 293 accacaaccaaaaccctaac 312
>dbj|AB105821.1| Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Nossen Length = 858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 293 accacaaccaaaaccctaac 312
>dbj|AB105820.1| Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Cvi-1 Length = 858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 293 accacaaccaaaaccctaac 312
>dbj|AB105819.1| Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Landsberg erecta Length = 858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 293 accacaaccaaaaccctaac 312
>dbj|AB105818.1| Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Columbia Length = 1260 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 444 accacaaccaaaaccctaac 463
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaggacgacgaggggat 192 |||||||||||||||||||| Sbjct: 985342 gaggaggacgacgaggggat 985361
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacga 183 |||||||||||||||||||| Sbjct: 23078870 ggcggcggcgaggaggacga 23078851
>emb|BX827127.1|CNS0A4ES Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZB06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1304 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 440 accacaaccaaaaccctaac 459
>gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complete sequence Length = 194995 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atcatccaaaggacttggatggaa 330 ||||||||||||||||| |||||| Sbjct: 174523 atcatccaaaggacttgaatggaa 174546
>emb|BX932893.1| Gallus gallus finished cDNA, clone ChEST35k6 Length = 658 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggcggcgaggagtccggtcc 144 |||||||||||||||||||| Sbjct: 10 ggcggcgaggagtccggtcc 29
>gb|AF193835.1|AF193835 Oryza sativa LRK1 protein (LRK1) mRNA, complete cds Length = 3514 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggcggcgaggaggacgacg 185 |||||||||||||||||||| Sbjct: 139 cggcggcgaggaggacgacg 120
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacga 183 |||||||||||||||||||| Sbjct: 1969 ggcggcggcgaggaggacga 1950
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gtccagcgcggcagcgcggt 252 |||||||||||||||||||| Sbjct: 2330816 gtccagcgcggcagcgcggt 2330797
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggcggcgaggaggacgacg 185 |||||||||||||||||||| Sbjct: 52692 cggcggcgaggaggacgacg 52711
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggcggcgaggaggacgacg 185 |||||||||||||||||||| Sbjct: 100332 cggcggcgaggaggacgacg 100351
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ggcggcgaggaggacgacga 186 |||||||||||||||||||| Sbjct: 137909 ggcggcgaggaggacgacga 137890
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ggcggcgaggaggacgacga 186 |||||||||||||||||||| Sbjct: 19036 ggcggcgaggaggacgacga 19017
>dbj|AB105824.1| Arabidopsis thaliana FD gene for bZIP transcription factor, exon 1-3, complete cds, cultiva:Landsberg erecta Length = 1561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 422 accacaaccaaaaccctaac 441
>dbj|AB105823.1| Arabidopsis thaliana FD gene for bZIP transcription factor, exon 1-3, complete cds, cultiva:Columbia Length = 1609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 444 accacaaccaaaaccctaac 463
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacga 183 |||||||||||||||||||| Sbjct: 138598 ggcggcggcgaggaggacga 138579
>dbj|AK119922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-G08, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaggacgacgaggggat 192 |||||||||||||||||||| Sbjct: 941 gaggaggacgacgaggggat 960
>dbj|AK107886.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D12, full insert sequence Length = 674 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||| ||||||| Sbjct: 123 ggcggcggcgaggagggcgacgag 100
>gb|BC090596.1| Xenopus tropicalis cDNA clone IMAGE:5336475, containing frame-shift errors Length = 4724 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cggcgaggagtccggtcctc 146 |||||||||||||||||||| Sbjct: 3589 cggcgaggagtccggtcctc 3570
>dbj|AK063739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F06, full insert sequence Length = 536 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ggcggcgaggaggacgacga 186 |||||||||||||||||||| Sbjct: 128 ggcggcgaggaggacgacga 109
>tpe|BN000021.1|ATH000021 TPA: TPA_inf: Arabidopsis thaliana bZIP protein AtbZIP14 mRNA, complete predicted cds Length = 858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 293 accacaaccaaaaccctaac 312
>gb|AY104298.1| Zea mays PCO095355 mRNA sequence Length = 950 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacga 183 |||||||||||||||||||| Sbjct: 138 ggcggcggcgaggaggacga 119
>dbj|AB105827.1| Arabidopsis thaliana FD gene for bZIP transcription factor, exon 1-3, complete cds, cultiva:Wassilewskija Length = 1538 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 422 accacaaccaaaaccctaac 441
>dbj|AB105826.1| Arabidopsis thaliana FD gene for bZIP transcription factor, exon 1-3, complete cds, cultiva:Nossen Length = 1503 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 402 accacaaccaaaaccctaac 421
>dbj|AB105825.1| Arabidopsis thaliana FD gene for bZIP transcription factor, exon 1-3, complete cds, cultiva:Cvi-1 Length = 1520 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 393 accacaaccaaaaccctaac 412
>gb|AY648055.1| Rubrivivax gelatinosus CoxB (coxB) gene, partial cds; CoxA (coxA), Cox11 (cox11), CoxC (coxC), SurF1 (surF1), Sco1 (sco1), and HemJ (hemJ) genes, complete cds; and HemI gene, partial cds Length = 7716 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cggcagcgcggtggcggtgc 260 |||||||||||||||||||| Sbjct: 5054 cggcagcgcggtggcggtgc 5073
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 accacaaccaaaaccctaac 22 |||||||||||||||||||| Sbjct: 68600 accacaaccaaaaccctaac 68619
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggcggcggcgaggaggacgacgag 187 |||||||||||||||| ||||||| Sbjct: 5864 ggcggcggcgaggagggcgacgag 5841 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,510,275 Number of Sequences: 3902068 Number of extensions: 3510275 Number of successful extensions: 78336 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 76473 Number of HSP's gapped (non-prelim): 1864 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
