>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = -1

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRT 4
           T+P+TG   G S+   GR    T        G   R + N  +G GG W    R E  T
Sbjct: 658 TEPNTGSAQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWSTGGRTEPNT 716



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/59 (30%), Positives = 23/59 (38%)
 Frame = -1

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRT 4
           T+P+TG   G S+   GR    T            R + N  +G GG W    R E  T
Sbjct: 640 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNT 698



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 18/59 (30%), Positives = 23/59 (38%)
 Frame = -1

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRT 4
           T+P+TG   G S+   GR    T            R + N  +G GG W    R E  T
Sbjct: 676 TEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNT 734



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = -1

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRT 4
           T+P+TG   G S+   GR    T        G   R + N  +G GG W    R E  T
Sbjct: 424 TEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNT 482

>OTU6B_HUMAN (Q8N6M0) OTU domain-containing protein 6B|
          Length = 293

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 2   AVLSSIRNLLLQSPPPPVSKFQSRR 76
           +V  +I NL+L++ PP +SK Q RR
Sbjct: 81  SVAVNISNLVLENQPPRISKAQKRR 105

>OTU6B_MOUSE (Q8K2H2) OTU domain-containing protein 6B|
          Length = 294

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 2   AVLSSIRNLLLQSPPPPVSKFQSRR 76
           +V  +I NL+L++ PP +SK Q RR
Sbjct: 82  SVAVNISNLVLENQPPRISKAQKRR 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,419,000
Number of Sequences: 219361
Number of extensions: 312536
Number of successful extensions: 1131
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)