ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549869.1| Oryza sativa (japonica cultivar-group), mRNA 254 2e-64
2dbj|AK121497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 2e-64
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
4dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
5dbj|AK071466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
7gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 127 3e-26
8gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 127 3e-26
9ref|XM_493857.1| Oryza sativa (japonica cultivar-group), predic... 109 7e-21
10gb|AY224549.1| Oryza sativa (japonica cultivar-group) isolate 24... 68 3e-08
11ref|XM_526895.1| PREDICTED: Pan troglodytes similar to ankyrin r... 44 0.37
12gb|AC008769.7| Homo sapiens chromosome 5 clone CTD-2006B8, compl... 44 0.37
13gb|AC093259.2| Homo sapiens chromosome 5 clone RP11-229C3, compl... 44 0.37
14ref|XM_937387.1| PREDICTED: Homo sapiens similar to Ankyrin repe... 44 0.37
15ref|XM_293911.5| PREDICTED: Homo sapiens similar to Ankyrin repe... 44 0.37
16gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosom... 42 1.5
17gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ... 42 1.5
18gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 42 1.5
19gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, compl... 42 1.5
20gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's ... 40 5.7
21ref|XM_459935.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.7
22gb|AE006673.1| Sulfolobus solfataricus P2 section 32 of 272 of t... 40 5.7
23gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, com... 40 5.7
24ref|XM_961076.1| Plasmodium falciparum 3D7 hypothetical protein ... 40 5.7
25emb|AL442124.6| Human DNA sequence from clone RP11-37D8 on chrom... 40 5.7
26emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 40 5.7
27emb|CR382400.1| Plasmodium falciparum chromosome 6, complete seq... 40 5.7
28gb|AC003035.1| Homo sapiens Xp22 PAC RPCI1-122K4 (Roswell Park C... 40 5.7
29gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 5.7
30emb|BX005153.13| Zebrafish DNA sequence from clone CH211-281G2 i... 40 5.7
31gb|AC131102.3| Mus musculus BAC clone RP23-101H16 from chromosom... 40 5.7
32emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on ch... 40 5.7 
>ref|XM_549869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4570

 Score =  254 bits (128), Expect = 2e-64
 Identities = 247/287 (86%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtgcctctgcttcatcacatgataataaggacgcgttaaagagtgcatacacacaggagt 192
           |||| |||||||||| | |||||||||| || ||  | ||||||| |||||| |||||||
Sbjct: 695 gtgcatctgcttcattatatgataataaagatgcacttaagagtgtatacacgcaggagt 754

                                                                       
Query: 193 tccatttctgtgaaaaagttaaggagaagctggaatatgatgcttaccaggagttcttga 252
           |||||||||| |||||||| ||||||||||||||  ||||||||||||||||||| ||||
Sbjct: 755 tccatttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttga 814

                                                                       
Query: 253 aatgccttcacatctacagccaggaaattattacgagaagtgaactgaagaacctggtta 312
           |||| |||||||| |||||||||||||||||||| || |||||| |||||||| |||| |
Sbjct: 815 aatgtcttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtga 874

                                                                       
Query: 313 gcgatatactacagcactaccctgatcttatggttggatttaatgaattcttagaacatt 372
             |||||||| |||||  | || |||||||||| ||| |||||||||||||| || || |
Sbjct: 875 atgatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcact 934

                                                          
Query: 373 gtgaaaatatagatggatttctggctggagtctttagtanaaagcaa 419
           |||| ||||||||||| ||||||||||| ||||| |||| || ||||
Sbjct: 935 gtgagaatatagatggttttctggctggtgtcttcagtaaaaggcaa 981
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>dbj|AK121497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007H10, full
           insert sequence
          Length = 4570

 Score =  254 bits (128), Expect = 2e-64
 Identities = 247/287 (86%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtgcctctgcttcatcacatgataataaggacgcgttaaagagtgcatacacacaggagt 192
           |||| |||||||||| | |||||||||| || ||  | ||||||| |||||| |||||||
Sbjct: 695 gtgcatctgcttcattatatgataataaagatgcacttaagagtgtatacacgcaggagt 754

                                                                       
Query: 193 tccatttctgtgaaaaagttaaggagaagctggaatatgatgcttaccaggagttcttga 252
           |||||||||| |||||||| ||||||||||||||  ||||||||||||||||||| ||||
Sbjct: 755 tccatttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttga 814

                                                                       
Query: 253 aatgccttcacatctacagccaggaaattattacgagaagtgaactgaagaacctggtta 312
           |||| |||||||| |||||||||||||||||||| || |||||| |||||||| |||| |
Sbjct: 815 aatgtcttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtga 874

                                                                       
Query: 313 gcgatatactacagcactaccctgatcttatggttggatttaatgaattcttagaacatt 372
             |||||||| |||||  | || |||||||||| ||| |||||||||||||| || || |
Sbjct: 875 atgatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcact 934

                                                          
Query: 373 gtgaaaatatagatggatttctggctggagtctttagtanaaagcaa 419
           |||| ||||||||||| ||||||||||| ||||| |||| || ||||
Sbjct: 935 gtgagaatatagatggttttctggctggtgtcttcagtaaaaggcaa 981
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  167 bits (84), Expect = 4e-38
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                          
Query: 179    atacacacaggagttccatttctgtgaaaaagttaaggagaagctggaatatgatgctta 238
              |||||| ||||||||||||||||| |||||||| ||||||||||||||  ||||||||||
Sbjct: 519640 atacacgcaggagttccatttctgcgaaaaagtgaaggagaagctggagcatgatgctta 519581

                                                                          
Query: 239    ccaggagttcttgaaatgccttcacatctacagccaggaaattattacgagaagtgaact 298
              ||||||||| |||||||| |||||||| |||||||||||||||||||| || |||||| |
Sbjct: 519580 ccaggagtttttgaaatgtcttcacatatacagccaggaaattattactaggagtgaatt 519521

                          
Query: 299    gaagaacctggt 310
              ||||||| ||||
Sbjct: 519520 gaagaacttggt 519509



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 315    gatatactacagcactaccctgatcttatggttggatttaatgaattcttagaacattgt 374
              |||||||| |||||  | || |||||||||| ||| |||||||||||||| || || |||
Sbjct: 519393 gatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcactgt 519334

                        
Query: 375    gaaaatatag 384
              || |||||||
Sbjct: 519333 gagaatatag 519324
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0482C06
          Length = 182779

 Score =  167 bits (84), Expect = 4e-38
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                          
Query: 179    atacacacaggagttccatttctgtgaaaaagttaaggagaagctggaatatgatgctta 238
              |||||| ||||||||||||||||| |||||||| ||||||||||||||  ||||||||||
Sbjct: 159841 atacacgcaggagttccatttctgcgaaaaagtgaaggagaagctggagcatgatgctta 159782

                                                                          
Query: 239    ccaggagttcttgaaatgccttcacatctacagccaggaaattattacgagaagtgaact 298
              ||||||||| |||||||| |||||||| |||||||||||||||||||| || |||||| |
Sbjct: 159781 ccaggagtttttgaaatgtcttcacatatacagccaggaaattattactaggagtgaatt 159722

                          
Query: 299    gaagaacctggt 310
              ||||||| ||||
Sbjct: 159721 gaagaacttggt 159710



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 315    gatatactacagcactaccctgatcttatggttggatttaatgaattcttagaacattgt 374
              |||||||| |||||  | || |||||||||| ||| |||||||||||||| || || |||
Sbjct: 159594 gatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcactgt 159535

                        
Query: 375    gaaaatatag 384
              || |||||||
Sbjct: 159534 gagaatatag 159525
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>dbj|AK071466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A15, full
            insert sequence
          Length = 1444

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                        
Query: 157  ataaggacgcgttaaagagtgcatacacacaggagttccatttctgtgaaaaagttaagg 216
            ||||||| || || ||||||||||||||| ||||||||| ||| ||||| ||||| ||||
Sbjct: 1302 ataaggatgcattgaagagtgcatacacaaaggagttccgtttttgtgagaaagtaaagg 1361

                                                                        
Query: 217  agaagctggaatatgatgcttaccaggagttcttgaaatgccttcacatctacagccagg 276
            ||||||| ||   ||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1362 agaagctagagcctgaagcttaccaggagtttttgaaatgccttcacatatacagccagg 1421

                                
Query: 277  aaattattacgagaagtgaa 296
            |||| ||||| || ||||||
Sbjct: 1422 aaataattacaaggagtgaa 1441
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                         
Query: 175   gtgcatacacacaggagttccatttctgtgaaaaagttaaggagaagctggaatatgatg 234
             ||||||||||| ||||||||| ||| ||||| ||||| ||||||||||| ||   ||| |
Sbjct: 13504 gtgcatacacaaaggagttccgtttttgtgagaaagtaaaggagaagctagagcctgaag 13445

                                                                         
Query: 235   cttaccaggagttcttgaaatgccttcacatctacagccaggaaattattacgagaagtg 294
             ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || ||||
Sbjct: 13444 cttaccaggagtttttgaaatgccttcacatatacagccaggaaataattacaaggagtg 13385

                             
Query: 295   aactgaagaacctggt 310
             || |||| ||| ||||
Sbjct: 13384 aattgaaaaacttggt 13369



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 318   atactacagcactaccctgatcttatggttggatttaatgaattcttagaacattgtgaa 377
             ||||| |||||||| || |||||||||  |||||||||||| ||| | ||||| || |||
Sbjct: 13230 atactgcagcactatccagatcttatgaatggatttaatgacttcctggaacagtgcgaa 13171

                    
Query: 378   aatatag 384
             |||||||
Sbjct: 13170 aatatag 13164
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                         
Query: 175   gtgcatacacacaggagttccatttctgtgaaaaagttaaggagaagctggaatatgatg 234
             ||||||||||| ||||||||| ||| ||||| ||||| ||||||||||| ||   ||| |
Sbjct: 13504 gtgcatacacaaaggagttccgtttttgtgagaaagtaaaggagaagctagagcctgaag 13445

                                                                         
Query: 235   cttaccaggagttcttgaaatgccttcacatctacagccaggaaattattacgagaagtg 294
             ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || ||||
Sbjct: 13444 cttaccaggagtttttgaaatgccttcacatatacagccaggaaataattacaaggagtg 13385

                             
Query: 295   aactgaagaacctggt 310
             || |||| ||| ||||
Sbjct: 13384 aattgaaaaacttggt 13369



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 318   atactacagcactaccctgatcttatggttggatttaatgaattcttagaacattgtgaa 377
             ||||| |||||||| || |||||||||  |||||||||||| ||| | ||||| || |||
Sbjct: 13230 atactgcagcactatccagatcttatgaatggatttaatgacttcctggaacagtgcgaa 13171

                    
Query: 378   aatatag 384
             |||||||
Sbjct: 13170 aatatag 13164
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>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                         
Query: 175   gtgcatacacacaggagttccatttctgtgaaaaagttaaggagaagctggaatatgatg 234
             ||||||||||| ||||||||| ||| ||||| ||||| ||||||||||| ||   ||| |
Sbjct: 22733 gtgcatacacaaaggagttccgtttttgtgagaaagtaaaggagaagctagagcctgaag 22674

                                                                         
Query: 235   cttaccaggagttcttgaaatgccttcacatctacagccaggaaattattacgagaagtg 294
             ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || ||||
Sbjct: 22673 cttaccaggagtttttgaaatgccttcacatatacagccaggaaataattacaaggagtg 22614

                             
Query: 295   aactgaagaacctggt 310
             || |||| ||| ||||
Sbjct: 22613 aattgaaaaacttggt 22598



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 318   atactacagcactaccctgatcttatggttggatttaatgaattcttagaacattgtgaa 377
             ||||| |||||||| || |||||||||  |||||||||||| ||| | ||||| || |||
Sbjct: 22459 atactgcagcactatccagatcttatgaatggatttaatgacttcctggaacagtgcgaa 22400

                    
Query: 378   aatatag 384
             |||||||
Sbjct: 22399 aatatag 22393
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>ref|XM_493857.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3171

 Score =  109 bits (55), Expect = 7e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 187 aggagttccatttctgtgaaaaagttaaggagaagctggaatatgatgcttaccaggagt 246
           ||||||||| ||| ||||| ||||| ||||||||||| ||   ||| |||||||||||||
Sbjct: 614 aggagttccgtttttgtgagaaagtaaaggagaagctagagcctgaagcttaccaggagt 673

                                                                  
Query: 247 tcttgaaatgccttcacatctacagccaggaaattattacgagaagtgaactgaa 301
           | ||||||||||||||||| |||||||||||||| ||||| || |||||| ||||
Sbjct: 674 ttttgaaatgccttcacatatacagccaggaaataattacaaggagtgaattgaa 728
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>gb|AY224549.1| Oryza sativa (japonica cultivar-group) isolate 24579 unknown mRNA
          Length = 543

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 351 tttaatgaattcttagaacattgtgaaaatatagatggatttctggctggagtctttagt 410
           |||||||||||||| || || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 7   tttaatgaattcttggagcactgtgagaatatagatggttttctggctggtgtcttcagt 66

                    
Query: 411 anaaagcaa 419
           | || ||||
Sbjct: 67  aaaaggcaa 75
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>ref|XM_526895.1| PREDICTED: Pan troglodytes similar to ankyrin repeat domain 11;
            nasopharyngeal carcinoma susceptibility protein; ankyrin
            repeat-containing protein 11 (LOC471517), mRNA
          Length = 6282

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 370  attgtgaaaatatagatggatttctg 395
            |||||||||||||||||||| |||||
Sbjct: 4565 attgtgaaaatatagatggaattctg 4590
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>gb|AC008769.7| Homo sapiens chromosome 5 clone CTD-2006B8, complete sequence
          Length = 147305

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 370  attgtgaaaatatagatggatttctg 395
            |||||||||||||||||||| |||||
Sbjct: 6110 attgtgaaaatatagatggaattctg 6085
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>gb|AC093259.2| Homo sapiens chromosome 5 clone RP11-229C3, complete sequence
          Length = 183380

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 370    attgtgaaaatatagatggatttctg 395
              |||||||||||||||||||| |||||
Sbjct: 182898 attgtgaaaatatagatggaattctg 182873
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>ref|XM_937387.1| PREDICTED: Homo sapiens similar to Ankyrin repeat domain protein 11
           (Ankyrin repeat-containing cofactor 1) (LOC648334), mRNA
          Length = 2413

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 370 attgtgaaaatatagatggatttctg 395
           |||||||||||||||||||| |||||
Sbjct: 218 attgtgaaaatatagatggaattctg 243
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>ref|XM_293911.5| PREDICTED: Homo sapiens similar to Ankyrin repeat domain protein 11
           (Ankyrin repeat-containing cofactor 1) (LOC644535), mRNA
          Length = 2413

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 370 attgtgaaaatatagatggatttctg 395
           |||||||||||||||||||| |||||
Sbjct: 218 attgtgaaaatatagatggaattctg 243
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>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence
          Length = 188085

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   ggatttaatgaattcttagaa 368
             |||||||||||||||||||||
Sbjct: 27573 ggatttaatgaattcttagaa 27593
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>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    ggagttccatttctgtgaaaa 208
              |||||||||||||||||||||
Sbjct: 168964 ggagttccatttctgtgaaaa 168944
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 96    caccaaggaggccaccctgagattc 120
             |||||||||||||| ||||||||||
Sbjct: 89739 caccaaggaggccagcctgagattc 89763
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>gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, complete sequence
          Length = 196385

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 361    tcttagaacattgtgaaaatataga 385
              |||||||||||| ||||||||||||
Sbjct: 125425 tcttagaacattttgaaaatataga 125449
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>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 204000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   catggaatagctagtgcctctgct 143
             ||||||||||| ||||||||||||
Sbjct: 47560 catggaatagcaagtgcctctgct 47583
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>ref|XM_459935.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E15048g)
            partial mRNA
          Length = 2343

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  ttaccaggagttcttgaaat 255
            ||||||||||||||||||||
Sbjct: 2310 ttaccaggagttcttgaaat 2329
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>gb|AE006673.1| Sulfolobus solfataricus P2 section 32 of 272 of the complete genome
          Length = 11389

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  ggatttaatgaattcttaga 367
            ||||||||||||||||||||
Sbjct: 6080 ggatttaatgaattcttaga 6061
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>gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, complete sequence
          Length = 241585

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    tcacatctacagccaggaaa 279
              ||||||||||||||||||||
Sbjct: 176546 tcacatctacagccaggaaa 176527
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>ref|XM_961076.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0890c) partial
           mRNA
          Length = 1623

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 tagaacattgtgaaaatata 383
           ||||||||||||||||||||
Sbjct: 695 tagaacattgtgaaaatata 714
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>emb|AL442124.6| Human DNA sequence from clone RP11-37D8 on chromosome 6 Contains part
             of the gene for smooth muscle cell associated protein 2
             (SMAP2) or secreted modular calcium binding protein 2
             (SMOC2), complete sequence
          Length = 45725

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   cttcacatctacagccagga 277
             ||||||||||||||||||||
Sbjct: 22543 cttcacatctacagccagga 22562
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 236     ttaccaggagttcttgaaat 255
               ||||||||||||||||||||
Sbjct: 1142461 ttaccaggagttcttgaaat 1142442
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>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5
          Length = 348034

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   tagaacattgtgaaaatata 383
             ||||||||||||||||||||
Sbjct: 74317 tagaacattgtgaaaatata 74298
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>gb|AC003035.1| Homo sapiens Xp22 PAC RPCI1-122K4 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 176498

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ttgcagcaggtgctgaggca 95
             ||||||||||||||||||||
Sbjct: 80050 ttgcagcaggtgctgaggca 80069
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     aaaccttgcagcaggtgctg 90
              ||||||||||||||||||||
Sbjct: 761828 aaaccttgcagcaggtgctg 761809
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>emb|BX005153.13| Zebrafish DNA sequence from clone CH211-281G2 in linkage group 24,
              complete sequence
          Length = 177146

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 204    gaaaaagttaaggagaagctggaa 227
              |||||||| |||||||||||||||
Sbjct: 127504 gaaaaagtaaaggagaagctggaa 127527
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>gb|AC131102.3| Mus musculus BAC clone RP23-101H16 from chromosome 5, complete sequence
          Length = 208536

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    tcacatctacagccaggaaa 279
              ||||||||||||||||||||
Sbjct: 198089 tcacatctacagccaggaaa 198070
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>emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on chromosome 14, complete
             sequence
          Length = 198113

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gcaaaccttgcagcaggtgc 88
             ||||||||||||||||||||
Sbjct: 87338 gcaaaccttgcagcaggtgc 87319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,754,700
Number of Sequences: 3902068
Number of extensions: 4754700
Number of successful extensions: 103379
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103256
Number of HSP's gapped (non-prelim): 123
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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