ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl54g03 |
|---|---|
| Clone Library Name | barley_pub |
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 167 bits (422), Expect = 1e-41 Identities = 82/116 (70%), Positives = 97/116 (83%) Frame = +1 Query: 70 VGGIVSDLTEGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GGI+ +T + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKN 116
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 166 bits (420), Expect = 2e-41 Identities = 79/116 (68%), Positives = 96/116 (82%) Frame = +1 Query: 70 VGGIVSDLTEGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GG++ LT + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 116
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 166 bits (419), Expect = 3e-41 Identities = 81/116 (69%), Positives = 99/116 (85%) Frame = +1 Query: 70 VGGIVSDLTEGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GGI+ LT G + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLT-GNKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKN Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKN 114
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 117 bits (293), Expect = 1e-26 Identities = 61/116 (52%), Positives = 80/116 (68%) Frame = +1 Query: 70 VGGIVSDLTEGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GG+ LT G G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLT-GKNGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D NN GRG VG+EANLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKN 114
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 101 bits (252), Expect = 7e-22 Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Frame = +1 Query: 70 VGGIVSDLTEGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 246 +GGIV + +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 247 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D G GK+ A LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKN 114
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 99.8 bits (247), Expect = 3e-21 Identities = 48/101 (47%), Positives = 69/101 (68%) Frame = +1 Query: 118 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANL 297 +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D NG +GK+G A+L Sbjct: 21 VKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAHL 80 Query: 298 EQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNT 420 E W+ T + +T GE+ F VTFD+ D G PGA +++N+ Sbjct: 81 EDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNS 118
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 91.3 bits (225), Expect = 9e-19 Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 5/118 (4%) Frame = +1 Query: 79 IVSDLTEGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 243 ++ L GL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 244 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D NG +GK A LE +LL L + GE F VTFDW+ ++ GVPGA ++KN Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKN 115
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 85.9 bits (211), Expect = 4e-17 Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 5/118 (4%) Frame = +1 Query: 79 IVSDLTEGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 243 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 244 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D NG +GK A LE L T P E F VTFDW+ ++ GVPGA I+KN Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKN 116
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 82.0 bits (201), Expect = 6e-16 Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 2/110 (1%) Frame = +1 Query: 97 EGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQLISSTNVDHNNGGR 270 E + ++G+ VL++K+ L DF A+++DGV +LG GV +L+S+T D +NGGR Sbjct: 16 EAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRLVSATARDPSNGGR 75 Query: 271 GKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNT 420 GK+G A+LE+ L + GE+ F V F+W + G+PGA++V N+ Sbjct: 76 GKLGKPAHLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVVTNS 122
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 79.7 bits (195), Expect = 3e-15 Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 18/122 (14%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLGRGVTCQL 231 +G ++G+VVLMRKN LDFN D G + +DG+T LGR V+ QL Sbjct: 11 KGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQL 70 Query: 232 ISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIV 411 IS+T D N G+GKVG + LE L +LP + GE+ F + F+W ++G+PGA + Sbjct: 71 ISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMGIPGAFYI 125 Query: 412 KN 417 KN Sbjct: 126 KN 127
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 79.0 bits (193), Expect = 5e-15 Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 19/138 (13%) Frame = +1 Query: 61 MFGVGGIVSDLTEGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 183 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 184 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVT 363 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 364 FDWSVDKLGVPGAIIVKN 417 F+W + +G+PGA +KN Sbjct: 115 FEWD-ESMGIPGAFYIKN 131
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 77.0 bits (188), Expect = 2e-14 Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 13/130 (10%) Frame = +1 Query: 67 GVGGIVSDLTEGLRGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELL 207 GV GI++ RG +KG+VVLMRKN LD N D + +D +T L Sbjct: 4 GVTGILN------RGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFL 57 Query: 208 GRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKL 387 GR V+ QLIS+T D G+GK+G LE + ++LP + G++ F + F+W D + Sbjct: 58 GRSVSLQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQSAFKIHFEWD-DDM 112 Query: 388 GVPGAIIVKN 417 G+PGA +KN Sbjct: 113 GIPGAFYIKN 122
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 76.6 bits (187), Expect = 2e-14 Identities = 45/103 (43%), Positives = 64/103 (62%) Frame = +1 Query: 109 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 288 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 289 ANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 LE + T+LP + GE+ F + F+W +G+PGA +KN Sbjct: 62 TFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKN 101
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 71.6 bits (174), Expect = 8e-13 Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 13/117 (11%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTCQLISSTN 246 RG +KG+VVLMRKN L N D + +D +T LGR V+ QLIS+T Sbjct: 8 RGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSLQLISATK 67 Query: 247 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 D N G+GK+G LE + T+LP + G++ F + F+W D G+ GA +KN Sbjct: 68 ADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFEWD-DGSGILGAFYIKN 119
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 70.5 bits (171), Expect = 2e-12 Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 22/126 (17%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 219 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 220 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 399 + QLIS+T D G GKVG E LE+ LPT LP + ++ F++ F+W G+PG Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFEWDA-SFGIPG 121 Query: 400 AIIVKN 417 A +KN Sbjct: 122 AFYIKN 127
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 67.4 bits (163), Expect = 1e-11 Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 22/126 (17%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 219 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 220 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 399 QLIS+T D G GKVG + LE+ L +LP + ++ F V F+W + G+P Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 400 AIIVKN 417 A +KN Sbjct: 122 AFYIKN 127
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 67.0 bits (162), Expect = 2e-11 Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 20/124 (16%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 225 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 226 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 405 +LIS+T D + G+GKV EA LE L T++P + ++ F+V F+W +G PGA Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 406 IVKN 417 ++N Sbjct: 123 YIEN 126
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 65.1 bits (157), Expect = 7e-11 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Frame = +1 Query: 100 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 240 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 241 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 417 T D GG+GK+G NL + LP + GE + V F+W D G+PGA +KN Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKN 115
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.4 bits (80), Expect = 0.061 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -1 Query: 269 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 104 RPSVRSLTMPPTP 66 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 31.6 bits (70), Expect = 0.87 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = -1 Query: 314 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 135 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 134 TTEPLRWAPR-RPSVR 90 T +P R+APR P VR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 31.2 bits (69), Expect = 1.1 Identities = 23/74 (31%), Positives = 31/74 (41%) Frame = -1 Query: 284 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 104 RPSVRSLTMPPTPN 63 PS +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -1 Query: 404 MAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSW 225 +APGTP + ++S++T + HCS + P P + WS L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 224 Q 222 Q Sbjct: 2576 Q 2576
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 136 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 243 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 3.3 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 218 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 129 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>JHD3_CAEEL (Q9U297) JmjC domain-containing histone demethylation protein 3 (EC| 1.14.11.-) (ceJMJD2) Length = 894 Score = 29.6 bits (65), Expect = 3.3 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%) Frame = +1 Query: 82 VSDLTEGLRGAHLKGSVVLMRKN---ALDFNDFGATVMDGVTELLGRGVTCQLISSTNVD 252 V D+ E + +G++V K +DF D + + V ++ ++C+ + N D Sbjct: 808 VEDVVEPPQKLFTRGAIVRADKKETVVVDFLDNSCSRDNHVEDI----ISCECLFCENGD 863 Query: 253 HNNGGRGKVGAEANLEQWLLPT 318 H G R + E++ LPT Sbjct: 864 HQYGARVSISCNKKFEKFELPT 885
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 29.6 bits (65), Expect = 3.3 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +1 Query: 118 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANL 297 L+ ++ + RK D + A +D + +++GR V +LIS+ H + ++ Sbjct: 80 LRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTK--IHPRTKKPMQSGRVSI 137 Query: 298 EQWLLPTNLPFITTGENKFAVTFDWSVD-KLGVPGAIIVKN 417 + W G++ T +++VD G PGAI V N Sbjct: 138 KDWCQKRG----AKGDH-VVYTAEFTVDADFGEPGAIAVAN 173
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.3 bits (64), Expect = 4.3 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -3 Query: 183 DGGAEVVEVERVLAHEDDG-----ALEVGAPEALRQVAH-DAADAKHLRSISG 43 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 29.3 bits (64), Expect = 4.3 Identities = 21/83 (25%), Positives = 36/83 (43%) Frame = +1 Query: 142 RKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTN 321 RKNA F DF T++ T ++ GV C ++ N+ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 322 LPFITTGENKFAVTFDWSVDKLG 390 L + T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>RMT2_ASHGO (Q759W1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 413 Score = 29.3 bits (64), Expect = 4.3 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = +1 Query: 283 AEANLEQWLLPTNLPFI----TTGENKFAVTFDWSVDKLGVPGAIIVKNTTP 426 A A + L T L +I T N+ V DW D + V A IVKN P Sbjct: 191 ATAAHQDTYLQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAASIVKNREP 242
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 5.7 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 40 LPRDRAKMFGVGG----IVSDLTEGLRGAHLKGSVVLMRKNALD 159 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 28.9 bits (63), Expect = 5.7 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = -1 Query: 281 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 102 P PRPP+ ++T +S P P VT S+ P S ++ L + L PR Sbjct: 1754 PPLPRPPIAFTTFPLPLS-PPNPPPPQLVTFSL---PISTPPTSSLPLPPPLSLPPPPRP 1809 Query: 101 PSVRSLTMPPTPNI 60 P+ R PP+ +I Sbjct: 1810 PAPRLFPQPPSTSI 1823
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.5 bits (62), Expect = 7.4 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = -1 Query: 431 LGGVVFLTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPR-PPLL 255 LGGV F + +PG+PS T P V + F SR S P PR PP Sbjct: 1877 LGGVSFGPLPSPGSPSSLTHH--------IPTVGDPDFPAPPRRSRRPS-PLAPRPPPSR 1927 Query: 254 WSTLVELMSWQVTPRPRSSVTPSMT 180 W++ S Q+ P +SV ++T Sbjct: 1928 WASPPLKTSPQLRVPPPTSVVTALT 1952
>SIPD_SALTY (Q56026) Cell invasion protein sipD (Salmonella invasion protein D)| Length = 343 Score = 28.5 bits (62), Expect = 7.4 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%) Frame = +1 Query: 226 QLISSTNVDHNNGGRG-KVGAEANLEQWLLPTNLP--FITTGENKFAVTFDWS------- 375 Q+ S+T + G G KV EA QWL NLP + + + + VT D + Sbjct: 207 QINSNTVLFPAQSGSGVKVATEAEARQWLSELNLPNSCLKSYGSGYVVTVDLTPLQKMVQ 266 Query: 376 -VDKLGVPG 399 +D LG PG Sbjct: 267 DIDGLGAPG 275
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 218 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 129 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.5 bits (62), Expect = 7.4 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -3 Query: 183 DGGAEVVEVERVLAHEDDG---ALEVGAPEALRQVAH-DAADAKH 61 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>TLP_PRUAV (P50694) Thaumatin-like protein precursor| Length = 245 Score = 28.5 bits (62), Expect = 7.4 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 10/51 (19%) Frame = -1 Query: 407 MMAPGT------PSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 285 M+ PGT P LST S+ + L +PV NGRF R+ CS AS Sbjct: 35 MVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 85
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/69 (28%), Positives = 29/69 (42%) Frame = -1 Query: 305 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 126 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 125 PLRWAPRRP 99 P+ AP P Sbjct: 188 PVTEAPTSP 196
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 230 SWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPSVRSLTMPPTPNI 60 SW VTPRP S+ +++P LK SA T++ + R P+ + P P++ Sbjct: 257 SWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQLLPAPDV 315
>PEPP2_HUMAN (Q9BQY4) Paired-like homeobox protein PEPP-2 (Testis homeobox gene| 1) Length = 288 Score = 28.5 bits (62), Expect = 7.4 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -1 Query: 413 LTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFA-SAPTFPRPPL 258 L MA G P + T +TA LF + + F SH S P FP P L Sbjct: 202 LPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPPSL 254
>AGPA_RHIME (Q9X4Y1) Periplasmic alpha-galactoside-binding protein precursor| Length = 693 Score = 28.1 bits (61), Expect = 9.7 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Frame = +1 Query: 118 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHN-NGGRGKVGAEAN 294 L+G+ VL+ K L D V +L GR V L+ +++ + N G VG Sbjct: 460 LEGAKVLLEKVGLKDTDGNGFVNFPAGKLGGRDVEIVLLVNSDYSTDRNLAEGMVGQMEK 519 Query: 295 LEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNT 420 L ++ L +A FDW + + A +V+NT Sbjct: 520 LGLRVVLNALDGKQRDAANYAGRFDWMIHRNTAEFASVVQNT 561
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 28.1 bits (61), Expect = 9.7 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = -1 Query: 287 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTV---APKSLKSSAFLRMRTTEPLR 117 SAPT P+ P +T + P P ++ P+ T AP + K A T P + Sbjct: 388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-----PTTPKK 442 Query: 116 WAPRRPSVRSLTMP--PTP 66 AP P + T P PTP Sbjct: 443 PAPTTPKEPAPTTPKEPTP 461
>TLP2_PRUPE (P83335) Thaumatin-like protein 2 precursor (PpAZ8)| Length = 242 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -1 Query: 395 GTPSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 285 G P LST S+ + L +PV +GRF R+ CS AS Sbjct: 42 GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDAS 82
>SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein| Length = 975 Score = 28.1 bits (61), Expect = 9.7 Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 5/123 (4%) Frame = -1 Query: 419 VFLTMMAPGTPSLSTDQSKVTANLFSPV----VMNGRFVGRSHCSRFASAPTFPRPPLLW 252 +F P TP L +S T+ +F P+ V G S FA+ P P P + Sbjct: 460 IFNRSARPFTPGLQGQRSGTTSVIFRPLAPKKVNEGLGSTSPAPSPFAAPPQGPTPLPSF 519 Query: 251 STLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRP-SVRSLTMP 75 +T+V TP +S + + P + SS ++ AP RP + P Sbjct: 520 TTVVP----SHTPVSGASSSTQRSSGPVTATSSLYIP---------APSRPVTPGGAPEP 566 Query: 74 PTP 66 PTP Sbjct: 567 PTP 569
>SYH_BURMA (Q62JW5) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 446 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +1 Query: 295 LEQWLLPTNLPF-----ITTGENKFAVT-FDWSVDKLGVPGAI 405 L+Q L NLPF + G + + +T F+W DKLG G + Sbjct: 246 LQQLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTV 288
>NU2M_TETNG (Q4JQI6) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 348 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -1 Query: 206 RSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPSVRSLTMPPTPNI 60 R S ++T+AP +L + R +TT+P + L +P TP I Sbjct: 294 RLSYAMTLTIAPNNLTGTLPWRTQTTQPNMMTATMAASSILLLPMTPGI 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,657,590 Number of Sequences: 219361 Number of extensions: 831524 Number of successful extensions: 3483 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3439 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
