Clone Name | bastl54g01 |
---|---|
Clone Library Name | barley_pub |
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)| (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 32.3 bits (72), Expect = 0.53 Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 10/71 (14%) Frame = -2 Query: 358 ACDPRPRCRGPDQIVDRSKKLGWPPSRQSMRTPSHLPNP*G----PRASPASLPRVVA-- 197 AC P + PD + + L PP M T P P G P A P LP+V+A Sbjct: 690 ACPPSLQQHFPDPAMSFAPVL--PPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQ 747 Query: 196 ----LQPRPPH 176 LQP PPH Sbjct: 748 PVVPLQPVPPH 758
>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 15) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD disintegrin protein) (Metargidin) (AD56) Length = 864 Score = 31.6 bits (70), Expect = 0.91 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = -2 Query: 361 LACDP---RPRCRGPDQIVDRSKKLGWPPSRQSMRTPSHLPNP*GPRASPASLPRVVALQ 191 L DP RP+ +GP + K L P + Q P LP P SLP VV + Sbjct: 799 LPADPVVRRPKSQGPTKPPPPRKPL--PANPQGQHPPGDLPGP-----GDGSLPLVVPSR 851 Query: 190 PRPP 179 P PP Sbjct: 852 PAPP 855
>ACRO_PIG (P08001) Acrosin precursor (EC 3.4.21.10) (53 kDa fucose-binding| protein) [Contains: Acrosin light chain; Acrosin heavy chain] Length = 415 Score = 31.6 bits (70), Expect = 0.91 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -2 Query: 289 PPSRQS-MRTPSHLPNP*GPRASPASLPRVVALQPRPP 179 PPS Q+ +R P + P GP P S PR A P PP Sbjct: 312 PPSVQTPVRPPWYFQRPPGPSQQPGSRPRPPAPPPAPP 349
>IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 subunit 8 (eIF3| p110) (eIF3c) Length = 935 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +3 Query: 147 GDGGISRRRQWGGRGCKATTRGSDAGEARGPHG 245 G GG SR R GG G + + R RGPHG Sbjct: 889 GSGGYSRGRGTGGGGYQNSGRTQGGSALRGPHG 921
>ALR2_AGRT5 (P58737) Alanine racemase, catabolic (EC 5.1.1.1)| Length = 388 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = -3 Query: 414 ILAHICVAIEPQQAAEGRSPVTLARAAVALTRS*IDRRNSGGLHLAN 274 +++H+ A EP + + +AA A + + NSGG+ L N Sbjct: 171 VMSHLACADEPDHVSNAAQLAVMRKAATAFPETPVCFSNSGGIFLGN 217
>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)| Length = 296 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/54 (35%), Positives = 20/54 (37%) Frame = -2 Query: 343 PRCRGPDQIVDRSKKLGWPPSRQSMRTPSHLPNP*GPRASPASLPRVVALQPRP 182 P GP Q +S PP R P P P GP P P QPRP Sbjct: 172 PPTGGPQQRYPQSPP---PPGGPQPRPPQGPPPPGGPHPRPTQGPPPTGPQPRP 222
>COQ2_MOUSE (Q66JT7) Para-hydroxybenzoate--polyprenyltransferase, mitochondrial| precursor (EC 2.5.1.-) (PHB:polyprenyltransferase) Length = 374 Score = 29.3 bits (64), Expect = 4.5 Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 9/82 (10%) Frame = +3 Query: 174 QWGGRGCKATTRGSDAGEARGPHGLGRWLGVLMDWRDGGHPSFFDRSTIWSGPRQRGRG- 350 +WGG G R + RGP GL L R G P DR G QRGR Sbjct: 3 RWGGAGLARGLRAVRSAWLRGPRGL-----PLALVRSAGVPGARDRRAPAPG-TQRGRAL 56 Query: 351 --------SQASDPLQPVVALL 392 + A PLQP + L+ Sbjct: 57 SLSAAAVVNSAPRPLQPYLRLM 78
>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor| Length = 261 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = -2 Query: 289 PPSRQSMRTPSHLPNP*GPRASPASLPRVVALQPRP 182 PP+ R P P P GP+ P P QPRP Sbjct: 152 PPAGPQPRPPQGPPPPAGPQPRPPQGPPTTGPQPRP 187 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 289 PPSRQSMRTPSHLPNP*GPRASPASLPRVVA-LQPRPP 179 PP +R P P P GP+ P P A QPRPP Sbjct: 138 PPGGPQLRPPQGPPPPAGPQPRPPQGPPPPAGPQPRPP 175
>ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein 10 (Zinc| finger protein RIN ZF) Length = 836 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = +3 Query: 147 GDGGISRRRQWGGRGCKATTR--GSDAGEARGPHGLG 251 G GG R QWGGR ++++R G + GE G+G Sbjct: 125 GGGGEPGRWQWGGRRQRSSSRRSGGEGGEEAEGSGVG 161
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 5/61 (8%) Frame = -2 Query: 388 RATTGCRGSLACDPRPRCRGP-----DQIVDRSKKLGWPPSRQSMRTPSHLPNP*GPRAS 224 R + G G + RP +GP ++ K P R ++ P LP P GP S Sbjct: 1060 RGSAGAAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS 1119 Query: 223 P 221 P Sbjct: 1120 P 1120
>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1006 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Frame = -2 Query: 286 PSRQSMRTPSHLPN--P*GPRASPASLPRVVALQPRPPHC 173 P R R+PSH PN P P A +LPR+ P C Sbjct: 344 PPRSPSRSPSHSPNRSPCVPPAPDMALPRLGTQSTGPGRC 383
>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)| Length = 815 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/41 (36%), Positives = 17/41 (41%) Frame = +3 Query: 129 GRECDDGDGGISRRRQWGGRGCKATTRGSDAGEARGPHGLG 251 GR C RR W R C RG+ G +GP G G Sbjct: 684 GRRCSTTPS-CRRRSTWSCRLCAEHLRGAGQGAVQGPRGRG 723 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,121,919 Number of Sequences: 219361 Number of extensions: 1270334 Number of successful extensions: 4404 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4390 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)