ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... 32 0.53
2ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disinteg... 32 0.91
3ACRO_PIG (P08001) Acrosin precursor (EC 3.4.21.10) (53 kDa fucos... 32 0.91
4IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 s... 31 1.2
5ALR2_AGRT5 (P58737) Alanine racemase, catabolic (EC 5.1.1.1) 30 3.5
6PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment) 30 3.5
7COQ2_MOUSE (Q66JT7) Para-hydroxybenzoate--polyprenyltransferase,... 29 4.5
8PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor 29 4.5
9ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein... 29 5.9
10COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor 28 7.7
11PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-pho... 28 7.7
12GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3) 28 7.7

>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
 Frame = -2

Query: 358 ACDPRPRCRGPDQIVDRSKKLGWPPSRQSMRTPSHLPNP*G----PRASPASLPRVVA-- 197
           AC P  +   PD  +  +  L  PP    M T    P P G    P A P  LP+V+A  
Sbjct: 690 ACPPSLQQHFPDPAMSFAPVL--PPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQ 747

Query: 196 ----LQPRPPH 176
               LQP PPH
Sbjct: 748 PVVPLQPVPPH 758



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>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (AD56)
          Length = 864

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -2

Query: 361 LACDP---RPRCRGPDQIVDRSKKLGWPPSRQSMRTPSHLPNP*GPRASPASLPRVVALQ 191
           L  DP   RP+ +GP +     K L  P + Q    P  LP P        SLP VV  +
Sbjct: 799 LPADPVVRRPKSQGPTKPPPPRKPL--PANPQGQHPPGDLPGP-----GDGSLPLVVPSR 851

Query: 190 PRPP 179
           P PP
Sbjct: 852 PAPP 855



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>ACRO_PIG (P08001) Acrosin precursor (EC 3.4.21.10) (53 kDa fucose-binding|
           protein) [Contains: Acrosin light chain; Acrosin heavy
           chain]
          Length = 415

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 289 PPSRQS-MRTPSHLPNP*GPRASPASLPRVVALQPRPP 179
           PPS Q+ +R P +   P GP   P S PR  A  P PP
Sbjct: 312 PPSVQTPVRPPWYFQRPPGPSQQPGSRPRPPAPPPAPP 349



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>IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 subunit 8 (eIF3|
           p110) (eIF3c)
          Length = 935

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 147 GDGGISRRRQWGGRGCKATTRGSDAGEARGPHG 245
           G GG SR R  GG G + + R       RGPHG
Sbjct: 889 GSGGYSRGRGTGGGGYQNSGRTQGGSALRGPHG 921



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>ALR2_AGRT5 (P58737) Alanine racemase, catabolic (EC 5.1.1.1)|
          Length = 388

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 414 ILAHICVAIEPQQAAEGRSPVTLARAAVALTRS*IDRRNSGGLHLAN 274
           +++H+  A EP   +       + +AA A   + +   NSGG+ L N
Sbjct: 171 VMSHLACADEPDHVSNAAQLAVMRKAATAFPETPVCFSNSGGIFLGN 217



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>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)|
          Length = 296

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/54 (35%), Positives = 20/54 (37%)
 Frame = -2

Query: 343 PRCRGPDQIVDRSKKLGWPPSRQSMRTPSHLPNP*GPRASPASLPRVVALQPRP 182
           P   GP Q   +S     PP     R P   P P GP   P   P     QPRP
Sbjct: 172 PPTGGPQQRYPQSPP---PPGGPQPRPPQGPPPPGGPHPRPTQGPPPTGPQPRP 222



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>COQ2_MOUSE (Q66JT7) Para-hydroxybenzoate--polyprenyltransferase, mitochondrial|
           precursor (EC 2.5.1.-) (PHB:polyprenyltransferase)
          Length = 374

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
 Frame = +3

Query: 174 QWGGRGCKATTRGSDAGEARGPHGLGRWLGVLMDWRDGGHPSFFDRSTIWSGPRQRGRG- 350
           +WGG G     R   +   RGP GL      L   R  G P   DR     G  QRGR  
Sbjct: 3   RWGGAGLARGLRAVRSAWLRGPRGL-----PLALVRSAGVPGARDRRAPAPG-TQRGRAL 56

Query: 351 --------SQASDPLQPVVALL 392
                   + A  PLQP + L+
Sbjct: 57  SLSAAAVVNSAPRPLQPYLRLM 78



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>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor|
          Length = 261

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 289 PPSRQSMRTPSHLPNP*GPRASPASLPRVVALQPRP 182
           PP+    R P   P P GP+  P   P     QPRP
Sbjct: 152 PPAGPQPRPPQGPPPPAGPQPRPPQGPPTTGPQPRP 187



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -2

Query: 289 PPSRQSMRTPSHLPNP*GPRASPASLPRVVA-LQPRPP 179
           PP    +R P   P P GP+  P   P   A  QPRPP
Sbjct: 138 PPGGPQLRPPQGPPPPAGPQPRPPQGPPPPAGPQPRPP 175



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>ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein 10 (Zinc|
           finger protein RIN ZF)
          Length = 836

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 147 GDGGISRRRQWGGRGCKATTR--GSDAGEARGPHGLG 251
           G GG   R QWGGR  ++++R  G + GE     G+G
Sbjct: 125 GGGGEPGRWQWGGRRQRSSSRRSGGEGGEEAEGSGVG 161



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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
 Frame = -2

Query: 388  RATTGCRGSLACDPRPRCRGP-----DQIVDRSKKLGWPPSRQSMRTPSHLPNP*GPRAS 224
            R + G  G +    RP  +GP     ++     K    P  R  ++ P  LP P GP  S
Sbjct: 1060 RGSAGAAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGS 1119

Query: 223  P 221
            P
Sbjct: 1120 P 1120



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>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1006

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -2

Query: 286 PSRQSMRTPSHLPN--P*GPRASPASLPRVVALQPRPPHC 173
           P R   R+PSH PN  P  P A   +LPR+      P  C
Sbjct: 344 PPRSPSRSPSHSPNRSPCVPPAPDMALPRLGTQSTGPGRC 383



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>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 815

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +3

Query: 129 GRECDDGDGGISRRRQWGGRGCKATTRGSDAGEARGPHGLG 251
           GR C        RR  W  R C    RG+  G  +GP G G
Sbjct: 684 GRRCSTTPS-CRRRSTWSCRLCAEHLRGAGQGAVQGPRGRG 723


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,121,919
Number of Sequences: 219361
Number of extensions: 1270334
Number of successful extensions: 4404
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4390
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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