>PIF1_SCHPO (Q9UUA2) DNA repair and recombination protein pif1, mitochondrial|
           precursor (EC 3.6.1.-) (ATP-dependent helicase pif1)
          Length = 805

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 26/88 (29%), Positives = 44/88 (50%)
 Frame = +2

Query: 14  QSSSTTKVHQIHGLDLTSQSKSK*TWRLFRYIMKRQVFIMADTIDAAAEEILGILESMSK 193
           +S ST ++ +   + L S SKS     LF+    R+  + +  +   ++E   IL+ + +
Sbjct: 267 KSKSTPQISKKFSVPLNSASKSPIGSSLFKTSDSRKKSVPSIFL---SDEQKRILDMVVE 323

Query: 194 QLQSIYFNGWCRLGASSALRVVAQHLKS 277
           Q  SI+F G    G S  LR + + LKS
Sbjct: 324 QQHSIFFTGSAGTGKSVLLRKIIEVLKS 351

>DMD_PIG (Q5GN48) Dystrophin|
          Length = 3674

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 22/88 (25%), Positives = 39/88 (44%)
 Frame = +2

Query: 137  DTIDAAAEEILGILESMSKQLQSIYFNGWCRLGASSALRVVAQHLKSSAAQEMKFDKVLH 316
            + I   AEEI  +LES+   +Q    N        + +R++AQ L      +   ++ L 
Sbjct: 1289 ENIPGGAEEISEVLESLENLMQHSEDN-------PNQIRILAQTLTDGGVMDELINEELE 1341

Query: 317  VDCSLWESMRALQKAVAEELELPQSVMA 400
               S W  +   ++AV  +  L QS+ +
Sbjct: 1342 TFNSRWRELH--EEAVRRQKLLEQSIQS 1367

>TOR1_YEAST (P35169) Phosphatidylinositol 3-kinase TOR1 (EC 2.7.1.137)|
            (PtdIns-3-kinase TOR1) (PI3-kinase TOR1) (PI3K TOR1)
          Length = 2470

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = +2

Query: 143  IDAAAEEILGILESMSKQLQSIYFNGWCRLGASSALRVVAQHLK---SSAAQEMK-FDKV 310
            +D     IL ++ + S+ L   YF   C     S + +V QH++    S  Q +K F  V
Sbjct: 952  LDQIIPTILDVMRTCSQSLLEFYFQQLC-----SLIIIVRQHIRPHVDSIFQAIKDFSSV 1006

Query: 311  LHVDCSLWESMRALQKAVAEELE 379
              +  +L   + A+ KA+  E +
Sbjct: 1007 AKLQITLVSVIEAISKALEGEFK 1029

>ARGC_METAC (Q8TK53) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 336

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -2

Query: 374 ALQQQPFARPSCFPTMSNQHGAPCQISFLEQLMISSVGLPLSEQRMPRVDTSH 216
           A +++  A P CFPT +N   AP   + L  + +      +S   +   +TSH
Sbjct: 133 AAREEFVANPGCFPTGANLAAAPLAAAGLIDIAVFDSKTGISGAGISPTETSH 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,161,749
Number of Sequences: 219361
Number of extensions: 1111392
Number of successful extensions: 2638
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)