Clone Name | bastl54f07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_612728.2| PREDICTED: Bos taurus L-arginine:glycine amidinotransferase, transcript variant 1 (GATM), mRNA Length = 2285 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ttgcaaaaggctgttgctgaa 370 ||||||||||||||||||||| Sbjct: 442 ttgcaaaaggctgttgctgaa 462
>ref|XM_871506.1| PREDICTED: Bos taurus L-arginine:glycine amidinotransferase, transcript variant 2 (GATM), mRNA Length = 1371 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ttgcaaaaggctgttgctgaa 370 ||||||||||||||||||||| Sbjct: 419 ttgcaaaaggctgttgctgaa 439
>gb|AY625263.1| Bos taurus l-arginine:glycine amidinotransferase mRNA, partial cds Length = 979 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ttgcaaaaggctgttgctgaa 370 ||||||||||||||||||||| Sbjct: 111 ttgcaaaaggctgttgctgaa 131
>gb|AC123842.4| Mus musculus BAC clone RP23-400N18 from chromosome 10, complete sequence Length = 200997 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 agcaaacaactacaaagcatctact 212 |||||||||||||| |||||||||| Sbjct: 89812 agcaaacaactacagagcatctact 89836
>gb|BC113272.1| Bos taurus L-arginine:glycine amidinotransferase, transcript variant 1, mRNA (cDNA clone MGC:137972 IMAGE:8080188), complete cds Length = 2337 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ttgcaaaaggctgttgctgaa 370 ||||||||||||||||||||| Sbjct: 471 ttgcaaaaggctgttgctgaa 491
>gb|DQ455294.1| Medicago truncatula cDNA-AFLP fragment BT11M44_227 sequence Length = 481 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ggccttgcaaaaggctgttgc 366 ||||||||||||||||||||| Sbjct: 197 ggccttgcaaaaggctgttgc 217
>gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete sequence Length = 97953 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggccttgcaaaaggctgttgc 366 ||||||||||||||||||||| Sbjct: 71881 ggccttgcaaaaggctgttgc 71861
>gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-29a5, complete sequence Length = 124676 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggccttgcaaaaggctgttgc 366 ||||||||||||||||||||| Sbjct: 83170 ggccttgcaaaaggctgttgc 83150
>emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-716K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168744 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 acaaggtgctccatgttgatt 323 ||||||||||||||||||||| Sbjct: 111641 acaaggtgctccatgttgatt 111661
>emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173641 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 acaaggtgctccatgttgatt 323 ||||||||||||||||||||| Sbjct: 68668 acaaggtgctccatgttgatt 68648
>ref|NM_208520.1| Eremothecium gossypii ABR218Cp (ABR218C), mRNA Length = 2124 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 agataccattgacgctgctgc 156 ||||||||||||||||||||| Sbjct: 1281 agataccattgacgctgctgc 1261
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 agataccattgacgctgctgc 156 ||||||||||||||||||||| Sbjct: 813221 agataccattgacgctgctgc 813241
>ref|XM_471037.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3474 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 gagctagagcttccccagtcggtgatggccat 402 ||||| |||||||| | ||||||||||||||| Sbjct: 487 gagctggagcttcctcggtcggtgatggccat 518
>gb|AF451898.1| Heliothis zea virus 1, complete genome Length = 228089 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcggtgatggccatcttcat 408 |||||||||||||||||||| Sbjct: 110688 tcggtgatggccatcttcat 110669
>emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, complete sequence Length = 211060 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 tcaagaaatgaaatttgaca 305 |||||||||||||||||||| Sbjct: 176355 tcaagaaatgaaatttgaca 176336
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 aaggctgttgctgaagagct 375 |||||||||||||||||||| Sbjct: 1570151 aaggctgttgctgaagagct 1570170
>gb|AC161423.1| Mus musculus BAC clone RP23-291E12 from chromosome 16, complete sequence Length = 226870 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aatgaacctggagattgttt 100 |||||||||||||||||||| Sbjct: 87811 aatgaacctggagattgttt 87830
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 371 gagctagagcttccccagtcggtgatggccat 402 ||||| |||||||| | ||||||||||||||| Sbjct: 916838 gagctggagcttcctcggtcggtgatggccat 916807
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 371 gagctagagcttccccagtcggtgatggccat 402 ||||| |||||||| | ||||||||||||||| Sbjct: 137499 gagctggagcttcctcggtcggtgatggccat 137468
>emb|CR626857.1| Rice Cluster I (RC-I), uncultured archeon clone 3D10 complete sequence Length = 36858 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 agagcttccccagtcggtga 395 |||||||||||||||||||| Sbjct: 7399 agagcttccccagtcggtga 7380
>gb|AC131683.4| Mus musculus BAC clone RP23-359C21 from 16, complete sequence Length = 200615 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aatgaacctggagattgttt 100 |||||||||||||||||||| Sbjct: 123441 aatgaacctggagattgttt 123460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,988,051 Number of Sequences: 3902068 Number of extensions: 3988051 Number of successful extensions: 70833 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70776 Number of HSP's gapped (non-prelim): 57 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)