Clone Name | bastl54f05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 59 cgccgtcgccatgggcagcgcctccaagctgctctcctccctcttgctcacctcctcccc 118 |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| || Sbjct: 34671355 cgccgtcgccatgggcggcgcctccaagctgctctcctccctcctcctcacctcctcgcc 34671414 Query: 119 gctccgtctccggccctccgccgccgccttcgcgctcatcctctcc 164 |||||| ||||| |||||||||| ||||||||||||| |||||||| Sbjct: 34671415 gctccgcctccgcccctccgccggcgccttcgcgctcttcctctcc 34671460 Score = 48.1 bits (24), Expect = 0.025 Identities = 109/136 (80%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 321 tggtcccgcctcgtggaccgcctcgcggccgccggttacgcagcccgcgccccctccccc 380 ||||| ||||| || ||||||||| |||| || || |||| || ||||| || |||||| Sbjct: 34671602 tggtcacgcctggtcgaccgcctctcggcggcgggctacggcgcgcgcgcaccttccccc 34671661 Query: 381 gccgacgagctcgccgtc-cccccggcagcggcctgtcggccgaggcggagtccgctgtg 439 ||||| ||||||| | || ||||| ||||||||||| |||| || ||| |||| ||| Sbjct: 34671662 gccgatgagctcgacctcgaccccgaatgcggcctgtcgtccgacgctgaggccgcggtg 34671721 Query: 440 tcctcctgcctggcct 455 ||||||| ||| |||| Sbjct: 34671722 tcctccttcctcgcct 34671737 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccgccgccgccttcgcgc 153 |||||||||||||||||||| Sbjct: 27035387 ctccgccgccgccttcgcgc 27035406 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcctcgtcaactccaccgcc 301 |||||||||||||||||||| Sbjct: 12720583 gcctcgtcaactccaccgcc 12720602
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 59 cgccgtcgccatgggcagcgcctccaagctgctctcctccctcttgctcacctcctcccc 118 |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| || Sbjct: 123372 cgccgtcgccatgggcggcgcctccaagctgctctcctccctcctcctcacctcctcgcc 123431 Query: 119 gctccgtctccggccctccgccgccgccttcgcgctcatcctctcc 164 |||||| ||||| |||||||||| ||||||||||||| |||||||| Sbjct: 123432 gctccgcctccgcccctccgccggcgccttcgcgctcttcctctcc 123477 Score = 48.1 bits (24), Expect = 0.025 Identities = 109/136 (80%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 321 tggtcccgcctcgtggaccgcctcgcggccgccggttacgcagcccgcgccccctccccc 380 ||||| ||||| || ||||||||| |||| || || |||| || ||||| || |||||| Sbjct: 123619 tggtcacgcctggtcgaccgcctctcggcggcgggctacggcgcgcgcgcaccttccccc 123678 Query: 381 gccgacgagctcgccgtc-cccccggcagcggcctgtcggccgaggcggagtccgctgtg 439 ||||| ||||||| | || ||||| ||||||||||| |||| || ||| |||| ||| Sbjct: 123679 gccgatgagctcgacctcgaccccgaatgcggcctgtcgtccgacgctgaggccgcggtg 123738 Query: 440 tcctcctgcctggcct 455 ||||||| ||| |||| Sbjct: 123739 tcctccttcctcgcct 123754
>dbj|AK073519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041M07, full insert sequence Length = 3161 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 59 cgccgtcgccatgggcagcgcctccaagctgctctcctccctcttgctcacctcctcccc 118 |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| || Sbjct: 63 cgccgtcgccatgggcggcgcctccaagctgctctcctccctcctcctcacctcctcgcc 122 Query: 119 gctccgtctccggccctccgccgccgccttcgcgctcatcctctcc 164 |||||| ||||| |||||||||| ||||||||||||| |||||||| Sbjct: 123 gctccgcctccgcccctccgccggcgccttcgcgctcttcctctcc 168 Score = 48.1 bits (24), Expect = 0.025 Identities = 109/136 (80%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 321 tggtcccgcctcgtggaccgcctcgcggccgccggttacgcagcccgcgccccctccccc 380 ||||| ||||| || ||||||||| |||| || || |||| || ||||| || |||||| Sbjct: 310 tggtcacgcctggtcgaccgcctctcggcggcgggctacggcgcgcgcgcaccttccccc 369 Query: 381 gccgacgagctcgccgtc-cccccggcagcggcctgtcggccgaggcggagtccgctgtg 439 ||||| ||||||| | || ||||| ||||||||||| |||| || ||| |||| ||| Sbjct: 370 gccgatgagctcgacctcgaccccgaatgcggcctgtcgtccgacgctgaggccgcggtg 429 Query: 440 tcctcctgcctggcct 455 ||||||| ||| |||| Sbjct: 430 tcctccttcctcgcct 445
>ref|XM_508566.1| PREDICTED: Pan troglodytes similar to testis specific, 10 interacting protein (LOC451338), mRNA Length = 3990 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 2841 ctgcagctccagctccgcctcgtc 2818
>gb|BC001058.2| Homo sapiens squamous cell carcinoma antigen recognised by T cells, mRNA (cDNA clone MGC:2038 IMAGE:3504745), complete cds Length = 2526 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1541 ctgcagctccagctccgcctcgtc 1518
>ref|NM_005146.3| Homo sapiens squamous cell carcinoma antigen recognised by T cells (SART1), mRNA Length = 3561 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1552 ctgcagctccagctccgcctcgtc 1529
>gb|BC018607.1| Homo sapiens squamous cell carcinoma antigen recognised by T cells, mRNA (cDNA clone IMAGE:4347524) Length = 1425 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 424 ctgcagctccagctccgcctcgtc 401
>gb|BT006637.1| Homo sapiens squamous cell carcinoma antigen recognised by T cells mRNA, complete cds Length = 2403 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1500 ctgcagctccagctccgcctcgtc 1477
>emb|CR626621.1| full-length cDNA clone CS0DC013YI02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 993 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 53 ctgcagctccagctccgcctcgtc 30
>emb|CR611735.1| full-length cDNA clone CS0DL001YP02 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2421 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1536 ctgcagctccagctccgcctcgtc 1513
>gb|AF353625.1|AF353625 Homo sapiens U4/U6.U5 tri-snRNP-associated 110 kDa protein mRNA, complete cds Length = 2527 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1533 ctgcagctccagctccgcctcgtc 1510
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 126 ctccggccctccgccgccgccttcgcgc 153 |||||||| ||||||||||||||||||| Sbjct: 18359237 ctccggccgtccgccgccgccttcgcgc 18359264 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 126 ctccggccctccgccgccgccttcgcgc 153 |||||||| ||||||||||||||||||| Sbjct: 18278608 ctccggccgtccgccgccgccttcgcgc 18278635 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccgccgacgagctcgccgtc 398 |||||||||||||||||||| Sbjct: 29055603 ccgccgacgagctcgccgtc 29055622
>dbj|AK223016.1| Homo sapiens mRNA for squamous cell carcinoma antigen recognized by T cells 1 variant, clone: HSI14471 Length = 2508 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1553 ctgcagctccagctccgcctcgtc 1530
>dbj|AP006063.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O06 Length = 180769 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 126 ctccggccctccgccgccgccttcgcgc 153 |||||||| ||||||||||||||||||| Sbjct: 157989 ctccggccgtccgccgccgccttcgcgc 158016
>dbj|AP005932.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0597A07 Length = 149682 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 126 ctccggccctccgccgccgccttcgcgc 153 |||||||| ||||||||||||||||||| Sbjct: 83397 ctccggccgtccgccgccgccttcgcgc 83424 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 126 ctccggccctccgccgccgccttcgcgc 153 |||||||| ||||||||||||||||||| Sbjct: 2768 ctccggccgtccgccgccgccttcgcgc 2795
>gb|AY889474.1| Synthetic construct Homo sapiens clone FLH013428.01X squamous cell carcinoma antigen recognized by T cells (SART1) mRNA, complete cds Length = 2403 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1500 ctgcagctccagctccgcctcgtc 1477
>emb|BX648500.1|HSM808648 Homo sapiens mRNA; cDNA DKFZp686H1978 (from clone DKFZp686H1978) Length = 2380 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1342 ctgcagctccagctccgcctcgtc 1319
>dbj|AP006287.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-1167A19, complete sequence Length = 208726 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 83000 ctgcagctccagctccgcctcgtc 82977
>emb|Y14314.1|HSARA1 Homo sapiens mRNA for IgE autoantigen Length = 2421 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1371 ctgcagctccagctccgcctcgtc 1348
>dbj|AB006198.1| Homo sapiens mRNA for SART-1, complete cds Length = 2506 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 1538 ctgcagctccagctccgcctcgtc 1515
>dbj|AP001201.7| Homo sapiens genomic DNA, chromosome 11, clone:RP11-821O7, complete sequence Length = 182547 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||||||||| Sbjct: 102931 ctgcagctccagctccgcctcgtc 102908
>ref|XM_482300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2520 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 377 ccccgccgacgagctcgccgtcc 399 ||||||||||||||||||||||| Sbjct: 1341 ccccgccgacgagctcgccgtcc 1363
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 377 ccccgccgacgagctcgccgtcc 399 ||||||||||||||||||||||| Sbjct: 19331303 ccccgccgacgagctcgccgtcc 19331281
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 377 ccccgccgacgagctcgccgtcc 399 ||||||||||||||||||||||| Sbjct: 60746 ccccgccgacgagctcgccgtcc 60724
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 377 ccccgccgacgagctcgccgtcc 399 ||||||||||||||||||||||| Sbjct: 104316 ccccgccgacgagctcgccgtcc 104294
>emb|BX324117.16| Mouse DNA sequence from clone RP23-389N3 on chromosome X, complete sequence Length = 155139 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 cgcagcccgcgccccctcccccgccg 384 |||||||||||||||| ||||||||| Sbjct: 66615 cgcagcccgcgcccccgcccccgccg 66590
>ref|NM_000697.1| Homo sapiens arachidonate 12-lipoxygenase (ALOX12), mRNA Length = 2335 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 147 ctgcagctccagctccgcctc 127
>gb|AY527817.1| Homo sapiens arachidonate 12-lipoxygenase (ALOX12) gene, complete cds Length = 18556 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 2093 ctgcagctccagctccgcctc 2073
>ref|XM_723644.1| Plasmodium yoelii yoelii str. 17XNL inorganic phosphate transporter (PY07774) partial mRNA Length = 1684 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 ccgccgccgccttcgcgctca 156 ||||||||||||||||||||| Sbjct: 214 ccgccgccgccttcgcgctca 194
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ccgccgccttcgcgctcatcc 159 ||||||||||||||||||||| Sbjct: 4758918 ccgccgccttcgcgctcatcc 4758938
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 188357 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 ccacgtccctttccctgactg 322 ||||||||||||||||||||| Sbjct: 32259 ccacgtccctttccctgactg 32239
>gb|AC040977.10| Homo sapiens chromosome 17, clone RP11-589P10, complete sequence Length = 174741 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 121075 ctgcagctccagctccgcctc 121055
>emb|BX930635.2| Gallus gallus finished cDNA, clone ChEST371o23 Length = 786 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ctccggccctccgccgccgcc 146 ||||||||||||||||||||| Sbjct: 143 ctccggccctccgccgccgcc 163
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 ccgccgccgccttcgcgctca 156 ||||||||||||||||||||| Sbjct: 1053646 ccgccgccgccttcgcgctca 1053626
>gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, complete sequence Length = 170043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 gcccgcgccccctcccccgcc 383 ||||||||||||||||||||| Sbjct: 49099 gcccgcgccccctcccccgcc 49079
>gb|BC069557.1| Homo sapiens arachidonate 12-lipoxygenase, mRNA (cDNA clone MGC:97215 IMAGE:7262463), complete cds Length = 2073 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 145 ctgcagctccagctccgcctc 125
>dbj|AP001824.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2507F7, complete sequence Length = 123430 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cccgcgccccctcccccgccg 384 ||||||||||||||||||||| Sbjct: 122198 cccgcgccccctcccccgccg 122178
>dbj|AP001888.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-300I6, complete sequence Length = 161505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cccgcgccccctcccccgccg 384 ||||||||||||||||||||| Sbjct: 1107 cccgcgccccctcccccgccg 1087
>emb|CT033755.6| Mouse DNA sequence from clone RP23-34A10 on chromosome 17, complete sequence Length = 91439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 agcccgcgccccctcccccgc 382 ||||||||||||||||||||| Sbjct: 47208 agcccgcgccccctcccccgc 47188
>gb|M35418.1|HUMPEC12L Human cell 12-lipoxygenase mRNA, complete cds Length = 2344 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 155 ctgcagctccagctccgcctc 135
>gb|M58704.1|HUMLIPXYG Human 12-lipoxygenase mRNA, complete cds Length = 2335 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 147 ctgcagctccagctccgcctc 127
>gb|M87004.1|HUMAD12LG Human arachidonate 12-lipoxygenase gene, 5' end Length = 723 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 692 ctgcagctccagctccgcctc 672
>gb|M62982.1|HUM12LIPOX Human arachidonate 12-lipoxygenase mRNA, complete cds Length = 2348 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 167 ctgcagctccagctccgcctc 147
>emb|Z29078.1|HSCYCLI H.sapiens cyclin D1 gene promoter region Length = 4585 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cccgcgccccctcccccgccg 384 ||||||||||||||||||||| Sbjct: 1487 cccgcgccccctcccccgccg 1467
>gb|L09054.1|HUMPRDA1A Homo sapiens PRAD1/cyclin D1 proto-oncogene, promoter region and exon 1 Length = 2554 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cccgcgccccctcccccgccg 384 ||||||||||||||||||||| Sbjct: 529 cccgcgccccctcccccgccg 509
>dbj|D12638.1|HUM12LIPOD Homo sapiens gene for arachidonate 12-lipoxygenase, partial cds Length = 2220 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctc 286 ||||||||||||||||||||| Sbjct: 1079 ctgcagctccagctccgcctc 1059
>gb|AC158357.4| Mus musculus BAC clone RP23-434L22 from chromosome 8, complete sequence Length = 217671 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctccgccgccgccttcgcgc 153 |||||||||||||||||||| Sbjct: 106359 ctccgccgccgccttcgcgc 106340
>ref|XM_524347.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 0610012D14 (LOC468963), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccccttccctgcagctccag 277 |||||||||||||||||||| Sbjct: 506 ccccttccctgcagctccag 525
>ref|XM_474928.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2925 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 cgcgccccctcccccgccgacgag 389 |||||||||||| ||||||||||| Sbjct: 265 cgcgccccctcctccgccgacgag 288
>ref|XM_468431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ccctccgccgccgccttcgcgctc 155 |||||||||||||||| ||||||| Sbjct: 1037 ccctccgccgccgcctccgcgctc 1014
>gb|BC107069.1| Homo sapiens cDNA clone IMAGE:40009788, partial cds Length = 1460 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 1389 cctcctccccgctccgtctc 1408
>gb|BC107070.1| Homo sapiens cDNA clone IMAGE:40009791, partial cds Length = 1460 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 1389 cctcctccccgctccgtctc 1408
>ref|XM_450663.1| Oryza sativa (japonica cultivar-group), mRNA Length = 843 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctccgccgccgccttcgcg 152 |||||||||||||||||||| Sbjct: 182 cctccgccgccgccttcgcg 163
>ref|NM_183855.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcctcgtcaactccaccgcc 301 |||||||||||||||||||| Sbjct: 1295 gcctcgtcaactccaccgcc 1314
>ref|NM_192495.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 558 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccgccgccgccttcgcgc 153 |||||||||||||||||||| Sbjct: 255 ctccgccgccgccttcgcgc 274
>gb|BC083551.1| Rattus norvegicus squamous cell carcinoma antigen recognized by T-cells 1, mRNA (cDNA clone MGC:93355 IMAGE:7134496), complete cds Length = 2545 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||| ||||| Sbjct: 1549 ctgcagctccagctccgcttcgtc 1526
>gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0002L02, complete sequence Length = 165685 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 148002 cgccgacgagctcgccgtcc 147983
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctccggccctccgccgccgccttc 149 |||||||| ||||||||||||||| Sbjct: 32312 ctccggccgtccgccgccgccttc 32289 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctccggccctccgccgccgccttc 149 |||||||| ||||||||||||||| Sbjct: 23757 ctccggccgtccgccgccgccttc 23734
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 162 tcctcgcgcaccgcggcatcccgccgcc 189 |||||| || |||||||||||||||||| Sbjct: 22555 tcctcgagcgccgcggcatcccgccgcc 22528
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccgccgccgccttcgcgctc 155 |||||||||||||||||||| Sbjct: 1039397 ccgccgccgccttcgcgctc 1039378
>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03, complete sequence Length = 151814 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 10752 cgccgacgagctcgccgtcc 10733
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgccgacgagctcgccgtc 398 |||||||||||||||||||| Sbjct: 59483 ccgccgacgagctcgccgtc 59464
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctccggccctccgccgccgccttc 149 |||||||| ||||||||||||||| Sbjct: 132846 ctccggccgtccgccgccgccttc 132823 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctccggccctccgccgccgccttc 149 |||||||| ||||||||||||||| Sbjct: 124291 ctccggccgtccgccgccgccttc 124268
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgccgacgagctcgccgtc 398 |||||||||||||||||||| Sbjct: 127555 ccgccgacgagctcgccgtc 127536
>ref|XM_867580.1| PREDICTED: Bos taurus similar to squamous cell carcinoma antigen recognized by T cells 1 (LOC615704), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1570 ctgcagctccagctctgcctcgtc 1547
>ref|NM_005157.3| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL1), transcript variant a, mRNA Length = 5384 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 3594 cctcctccccgctccgtctc 3613
>ref|NM_007313.2| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL1), transcript variant b, mRNA Length = 5881 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 4087 cctcctccccgctccgtctc 4106
>gb|BC051394.1| Mus musculus squamous cell carcinoma antigen recognized by T-cells 1, mRNA (cDNA clone MGC:59155 IMAGE:5097832), complete cds Length = 2532 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1556 ctgcagctccagctctgcctcgtc 1533
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgccgccgccttcgcgctc 155 |||||||||||||||||||| Sbjct: 2526394 ccgccgccgccttcgcgctc 2526413
>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence Length = 178068 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccgccgccgccttcgcgc 153 |||||||||||||||||||| Sbjct: 10928 ctccgccgccgccttcgcgc 10947
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tccctgcagctccagctccg 282 |||||||||||||||||||| Sbjct: 16908 tccctgcagctccagctccg 16889
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 5258 cgccgacgagctcgccgtcc 5239
>emb|CR974462.5| Mouse DNA sequence from clone RP23-222K15 on chromosome 17, complete sequence Length = 228057 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 ctctcctccctcttgctcacctcctccc 117 |||||||| ||||| ||||||||||||| Sbjct: 169639 ctctcctctctctttctcacctcctccc 169666
>ref|XM_847676.1| PREDICTED: Canis familiaris similar to galanin receptor 3 (LOC610233), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ccgtctccggccctccgccgccgc 145 |||||||||| ||||||||||||| Sbjct: 681 ccgtctccgggcctccgccgccgc 658
>gb|AC026470.6| Homo sapiens chromosome 16 clone RP11-44I10, complete sequence Length = 169566 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 agctgctctcctccctcttg 104 |||||||||||||||||||| Sbjct: 62089 agctgctctcctccctcttg 62070
>gb|BC053791.1| Xenopus laevis DnaJ (Hsp40) homolog, subfamily A, member 2, mRNA (cDNA clone MGC:64385 IMAGE:6878561), complete cds Length = 1584 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggccctccgccgccgccttc 149 |||||||||||||||||||| Sbjct: 57 ggccctccgccgccgccttc 76
>gb|AY844213.1| Eleutherodactylus pluvicanorus 28S ribosomal RNA gene, partial sequence Length = 830 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 cccgctccgtctccggccctccgc 139 |||||||||| ||||||||||||| Sbjct: 192 cccgctccgtttccggccctccgc 215
>gb|AC161221.7| Mus musculus chromosome 1, clone RP24-228M19, complete sequence Length = 164548 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aagctgctctcctccctctt 103 |||||||||||||||||||| Sbjct: 128392 aagctgctctcctccctctt 128373
>gb|AY230755.1| Cameraria guttifinitella 28S ribosomal RNA gene, partial sequence Length = 546 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 ccgcctcgtggaccgcctcgcggc 349 |||| ||||||||||||||||||| Sbjct: 320 ccgcatcgtggaccgcctcgcggc 297
>emb|AL731533.8| Human DNA sequence from clone RP11-118K6 on chromosome 10 Contains a novel gene, the 5' end of the PFKP gene for phosphofructokinase platelet and a CpG island, complete sequence Length = 98398 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 64071 gcccgcgccccctcccccgc 64090
>emb|AL031597.7|HS996D20 Human DNA sequence from clone RP5-996D20 on chromosome 22q13.31-13.32, complete sequence Length = 98100 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 tcgccatgggcagcgcctccaagctgct 91 ||||| || ||||||||||||||||||| Sbjct: 92022 tcgccctgtgcagcgcctccaagctgct 92049
>gb|DQ145721.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL1) gene, complete cds Length = 176708 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 174012 cctcctccccgctccgtctc 174031
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccgccgccgccttcgcgctc 155 |||||||||||||||||||| Sbjct: 1856247 ccgccgccgccttcgcgctc 1856228
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 cgcgccccctcccccgccgacgag 389 |||||||||||| ||||||||||| Sbjct: 146635 cgcgccccctcctccgccgacgag 146612
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cccgcgccccctcccccgcc 383 |||||||||||||||||||| Sbjct: 79683 cccgcgccccctcccccgcc 79664
>gb|BC028823.1| Mus musculus squamous cell carcinoma antigen recognized by T-cells 1, mRNA (cDNA clone MGC:37798 IMAGE:5097832), complete cds Length = 2532 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1556 ctgcagctccagctctgcctcgtc 1533
>gb|AC023813.6| Homo sapiens chromosome 16 clone CTC-527H23, complete sequence Length = 127725 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 agctgctctcctccctcttg 104 |||||||||||||||||||| Sbjct: 114904 agctgctctcctccctcttg 114885
>emb|X51945.1|HSABLM H.sapiens c-abl mRNA 3'-fragment Length = 2374 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 587 cctcctccccgctccgtctc 606
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 105485 cgccgacgagctcgccgtcc 105466
>gb|U07563.1|HSABLGR3 Human proto-oncogene tyrosine-protein kinase (ABL) gene, exon 1a and exons 2-10, complete cds Length = 84539 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 80643 cctcctccccgctccgtctc 80662
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccccttccctgcagctccag 277 |||||||||||||||||||| Sbjct: 12960 ccccttccctgcagctccag 12941
>gb|AF129931.1|AF129931 Mus musculus hypoxia associated factor (Haf) mRNA, complete cds Length = 2597 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1594 ctgcagctccagctctgcctcgtc 1571
>dbj|AK088341.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430013H14 product:squamous cell carcinoma antigen recognized by T-cells 1, full insert sequence Length = 2517 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1555 ctgcagctccagctctgcctcgtc 1532
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 cgcgccccctcccccgccgacgag 389 |||||||||||| ||||||||||| Sbjct: 8084511 cgcgccccctcctccgccgacgag 8084488
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctccggccctccgccgccgccttc 149 |||||||| ||||||||||||||| Sbjct: 17616232 ctccggccgtccgccgccgccttc 17616209
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 19152914 cgccgacgagctcgccgtcc 19152895
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctccgccgccgccttcgcg 152 |||||||||||||||||||| Sbjct: 12073407 cctccgccgccgccttcgcg 12073388
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgccgacgagctcgccgtc 398 |||||||||||||||||||| Sbjct: 18092228 ccgccgacgagctcgccgtc 18092209 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 10025236 cgccgacgagctcgccgtcc 10025217
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ccctccgccgccgccttcgcgctc 155 |||||||||||||||| ||||||| Sbjct: 35224540 ccctccgccgccgcctccgcgctc 35224517
>emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0045P24, complete sequence Length = 124420 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 cgcgccccctcccccgccgacgag 389 |||||||||||| ||||||||||| Sbjct: 18043 cgcgccccctcctccgccgacgag 18020
>gb|AF315496.1|AF315496 Camellia achrysantha internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 528 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 427 gcccgcgccccctcccccgc 446
>gb|AF315491.1|AF315491 Camellia ptilosperma internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 660 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 434 gcccgcgccccctcccccgc 453
>gb|AF315488.1|AF315488 Camellia grandis internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 649 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 424 gcccgcgccccctcccccgc 443
>gb|AF315487.1|AF315487 Camellia impressinervis internal transcribed spacer 2, complete sequence Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 8 gcccgcgccccctcccccgc 27
>gb|AF315485.1|AF315485 Camellia fascicularis internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 658 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 420 gcccgcgccccctcccccgc 439
>gb|AF315480.1|AF315480 Camellia flavida internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 650 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 424 gcccgcgccccctcccccgc 443
>ref|NM_031596.1| Rattus norvegicus squamous cell carcinoma antigen recognized by T-cells 1 (Sart1), mRNA Length = 2532 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||| ||||| Sbjct: 1576 ctgcagctccagctccgcttcgtc 1553
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ccccctcccccgccgacgag 389 |||||||||||||||||||| Sbjct: 2561982 ccccctcccccgccgacgag 2562001 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 gctctccgccgtcgccatgggcag 76 |||||||||||||||| ||||||| Sbjct: 445056 gctctccgccgtcgccgtgggcag 445079
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccgccgccgccttcgcgc 153 |||||||||||||||||||| Sbjct: 94218 ctccgccgccgccttcgcgc 94237
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ctgcagctccagctccgcct 285 |||||||||||||||||||| Sbjct: 2083856 ctgcagctccagctccgcct 2083875
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccgccgacgagctcgccgtc 398 |||||||||||||||||||| Sbjct: 70590 ccgccgacgagctcgccgtc 70609
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcctcgtcaactccaccgcc 301 |||||||||||||||||||| Sbjct: 982 gcctcgtcaactccaccgcc 1001
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcctcgtcaactccaccgcc 301 |||||||||||||||||||| Sbjct: 87612 gcctcgtcaactccaccgcc 87631
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctccgccgccgccttcgcg 152 |||||||||||||||||||| Sbjct: 177887 cctccgccgccgccttcgcg 177868
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctccgccgccgccttcgcg 152 |||||||||||||||||||| Sbjct: 7786 cctccgccgccgccttcgcg 7767
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ccctccgccgccgccttcgcgctc 155 |||||||||||||||| ||||||| Sbjct: 36590 ccctccgccgccgcctccgcgctc 36567
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ccctccgccgccgccttcgcgctc 155 |||||||||||||||| ||||||| Sbjct: 119896 ccctccgccgccgcctccgcgctc 119873
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full insert sequence Length = 1895 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcctcgtcaactccaccgcc 301 |||||||||||||||||||| Sbjct: 1518 gcctcgtcaactccaccgcc 1537
>emb|Y12619.1|BSL7EL Bacillus sp. L7 gene encoding endo-levanase Length = 3724 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gcagctccagctccgcctcg 287 |||||||||||||||||||| Sbjct: 3236 gcagctccagctccgcctcg 3217
>dbj|AK106224.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A03, full insert sequence Length = 1446 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 624 cgccgacgagctcgccgtcc 643
>dbj|AK100967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142I15, full insert sequence Length = 3546 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 cgcgccccctcccccgccgacgag 389 |||||||||||| ||||||||||| Sbjct: 576 cgcgccccctcctccgccgacgag 599
>dbj|AK066626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069L21, full insert sequence Length = 3058 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 207 cgccgacgagctcgccgtcc 226
>dbj|AK061601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E02, full insert sequence Length = 843 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctccgccgccgccttcgcg 152 |||||||||||||||||||| Sbjct: 182 cctccgccgccgccttcgcg 163
>emb|AJ544611.1|TRU544611 Takifugu rubripes dmd gene for putative dystrophin, exons 35-56 Length = 14398 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gcctccaagctgctctcctc 97 |||||||||||||||||||| Sbjct: 5317 gcctccaagctgctctcctc 5336
>dbj|AB006193.1| Mus musculus gene for oviductal glycoprotein, complete cds Length = 16166 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tgctctcctccctcttgctc 107 |||||||||||||||||||| Sbjct: 10665 tgctctcctccctcttgctc 10646
>emb|AL161733.20| Human DNA sequence from clone RP11-83J21 on chromosome 9, complete sequence Length = 176466 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 109261 cctcctccccgctccgtctc 109280
>gb|AC025786.16| Mus musculus chromosome 3, clone RP23-169H9, complete sequence Length = 181293 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tgctctcctccctcttgctc 107 |||||||||||||||||||| Sbjct: 84978 tgctctcctccctcttgctc 84997
>gb|AF100956.1|AF100956 Mus musculus major histocompatibility locus class II region; Fas-binding protein Daxx (DAXX) gene, partial cds; Bing1 (BING1), tapasin (tapasin), RalGDS-like factor (RLF), KE2 (KE2), BING4 (BING4), beta1, 3-galactosyl transferase (beta1,3-galactosyl transferase), ribosomal protein subunit S18 (RPS18), Sacm21 (Sacm21), H2K1(b) (H2-K1(b)), RING1 (RING1), KE6a (KE6a), KE4 (KE4), RXRbeta (RXRbeta), collagen alpha-2 (XI) (COLA11A2), H2-O alpha (H2-Oalpha), RING3 (RING3), H2-M alpha (H2-M alpha), H2-M beta 2 (H2-M beta2), and H2-M beta1 (H2-M beta1) genes, complete cds; and LMP 2 gene, partial cds Length = 273800 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 ctctcctccctcttgctcacctcctccc 117 |||||||| ||||| ||||||||||||| Sbjct: 163117 ctctcctctctctttctcacctcctccc 163144
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccgacgagctcgccgtcc 399 |||||||||||||||||||| Sbjct: 19164190 cgccgacgagctcgccgtcc 19164171
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctccggccctccgccgccgccttc 149 |||||||| ||||||||||||||| Sbjct: 17717426 ctccggccgtccgccgccgccttc 17717403
>ref|NM_016882.2| Mus musculus squamous cell carcinoma antigen recognized by T-cells 1 (Sart1), mRNA Length = 2597 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1594 ctgcagctccagctctgcctcgtc 1571
>gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, complete sequence Length = 205150 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 117292 ctgcagctccagctctgcctcgtc 117315
>dbj|AB209642.1| Homo sapiens mRNA for Proto-oncogene tyrosine-protein kinase ABL1 variant protein Length = 5807 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 4015 cctcctccccgctccgtctc 4034
>dbj|AB209456.1| Homo sapiens mRNA for v-abl Abelson murine leukemia viral oncogene homolog 1 isoform b variant protein Length = 5583 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 3793 cctcctccccgctccgtctc 3812
>emb|AL671190.10| Mouse DNA sequence from clone RP23-464L12 on chromosome 4, complete sequence Length = 180239 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cctgcagctccagctccgcc 284 |||||||||||||||||||| Sbjct: 162737 cctgcagctccagctccgcc 162718
>emb|AL844162.9| Mouse DNA sequence from clone RP23-160O12 on chromosome 2, complete sequence Length = 80190 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cccgcgccccctcccccgcc 383 |||||||||||||||||||| Sbjct: 3902 cccgcgccccctcccccgcc 3921
>emb|X16416.1|HSABL Human c-abl mRNA encoding p150 protein Length = 5527 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cctcctccccgctccgtctc 128 |||||||||||||||||||| Sbjct: 3738 cctcctccccgctccgtctc 3757
>dbj|AB014722.1| Rattus norvegicus mRNA for rSALT-1(806), complete cds Length = 2532 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 |||||||||||||||||| ||||| Sbjct: 1576 ctgcagctccagctccgcttcgtc 1553
>dbj|AB014721.1| Mus musculus mRNA for mSART-1(806), complete cds Length = 2513 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctgcagctccagctccgcctcgtc 289 ||||||||||||||| |||||||| Sbjct: 1552 ctgcagctccagctctgcctcgtc 1529
>gb|AC165250.2| Mus musculus BAC clone RP24-209D3 from chromosome 13, complete sequence Length = 173581 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 gcccgcgccccctcccccgc 382 |||||||||||||||||||| Sbjct: 97771 gcccgcgccccctcccccgc 97752
>dbj|AP002340.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2011F17, complete sequence Length = 165747 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cccgcgccccctcccccgcc 383 |||||||||||||||||||| Sbjct: 91836 cccgcgccccctcccccgcc 91855
>dbj|AB022674.1| Oryza sativa (japonica cultivar-group) rpl12-2 gene for chloroplast ribosomal protein L12, complete cds Length = 2075 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccgccgccgccttcgcgc 153 |||||||||||||||||||| Sbjct: 1433 ctccgccgccgccttcgcgc 1452 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,039,497 Number of Sequences: 3902068 Number of extensions: 4039497 Number of successful extensions: 103959 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100997 Number of HSP's gapped (non-prelim): 2962 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)