Clone Information

BLAST Search Result

Clone Name	bastl54e11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FUK_HUMAN (Q8N0W3) L-fucose kinase (EC 2.7.1.52) (Fucokinase)	39	0.007
2	FPGT_HUMAN (O14772) Fucose-1-phosphate guanylyltransferase (EC 2...	34	0.18
3	GATA4_MOUSE (Q08369) Transcription factor GATA-4 (GATA-binding f...	33	0.23
4	OTX1_MOUSE (P80205) Homeobox protein OTX1	33	0.23
5	OTX1_HUMAN (P32242) Homeobox protein OTX1	33	0.23
6	OTX1_RAT (Q63410) Homeobox protein OTX1	33	0.39
7	ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 prot...	32	0.67
8	KLF15_HUMAN (Q9UIH9) Krueppel-like factor 15 (Kidney-enriched kr...	32	0.87
9	TLX2_MOUSE (Q61663) T-cell leukemia homeobox protein 2 (Homeobox...	32	0.87
10	CJ095_HUMAN (Q9H7T3) Protein C10orf95	32	0.87
11	ISPE_PORGI (Q7MVU8) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	32	0.87
12	GATA4_RAT (P46152) Transcription factor GATA-4 (GATA-binding fac...	31	1.1
13	YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P...	31	1.5
14	CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24	31	1.5
15	TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.2...	31	1.5
16	ISPE_AQUAE (O67060) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	31	1.5
17	EPAS1_RAT (Q9JHS1) Endothelial PAS domain-containing protein 1 (...	31	1.5
18	RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated p...	30	2.5
19	RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated p...	30	2.5
20	RSMB_CHICK (Q9PV94) Small nuclear ribonucleoprotein-associated p...	30	2.5
21	PAPI_ECOLI (P04743) Major pilus subunit operon regulatory protein	30	2.5
22	ISPE_CAUCR (Q9A8L7) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	30	2.5
23	RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated pro...	30	2.5
24	RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated p...	30	2.5
25	SUBT_BACS9 (P28842) Subtilisin precursor (EC 3.4.21.62)	30	2.5
26	MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1	30	3.3
27	KS7A_ECOLI (P62584) P fimbrial regulatory protein KS71A	30	3.3
28	KS7A_ECOL6 (P62585) P fimbrial regulatory protein KS71A	30	3.3
29	P3A2_STRPU (Q04073) DNA-binding protein P3A2	30	3.3
30	LEU3_CORJK (Q4JUQ0) 3-isopropylmalate dehydrogenase (EC 1.1.1.85...	30	3.3
31	DXR_RHOBA (Q7URM5) 1-deoxy-D-xylulose 5-phosphate reductoisomera...	30	3.3
32	ROLC_NICGL (P07051) Cytokinin-beta-glucosidase (EC 3.2.1.-) (Pro...	30	3.3
33	BSN_MOUSE (O88737) Bassoon protein	30	3.3
34	Y1855_MYCBO (P64894) Hypothetical protein Mb1855	29	4.3
35	Y1824_MYCTU (P64893) Hypothetical protein Rv1824/MT1872	29	4.3
36	GDF7_HUMAN (Q7Z4P5) Growth/differentiation factor 7 precursor (G...	29	4.3
37	YXKO_BACSU (P94368) Hypothetical protein yxkO	29	4.3
38	VG65_ICHV1 (Q00106) Hypothetical gene 65 protein	29	4.3
39	CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic lin...	29	4.3
40	BSN_RAT (O88778) Bassoon protein	29	4.3
41	ADA2A_HUMAN (P08913) Alpha-2A adrenergic receptor (Alpha-2A adre...	29	5.7
42	PSD1_CAEEL (Q18115) 26S proteasome non-ATPase regulatory subunit...	29	5.7
43	ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A	29	5.7
44	YGB7_SCHPO (O74779) Protein C25B2.07c	29	5.7
45	TIP1_YEAST (P27654) Temperature shock-inducible protein 1 precur...	28	7.4
46	URE3_KLEAE (P18316) Urease gamma subunit (EC 3.5.1.5) (Urea amid...	28	7.4
47	HEM3_CORDI (Q6NJK0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	28	7.4
48	BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor	28	7.4
49	PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant p...	28	7.4
50	LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2...	28	7.4
51	TLX2_HUMAN (O43763) T-cell leukemia homeobox protein 2 (Homeobox...	28	7.4
52	ISPE_DESDG (Q30ZH4) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	28	7.4
53	ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 prot...	28	7.4
54	RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-assoc...	28	7.4
55	HEY1_MOUSE (Q9WV93) Hairy/enhancer-of-split related with YRPW mo...	28	7.4
56	MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)	28	7.4
57	DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (...	28	7.4
58	RSMB_MONDO (Q9TU66) Small nuclear ribonucleoprotein-associated p...	28	9.7
59	C5A3_AMYOR (Q8RN05) Cytochrome P450 165A3 (EC 1.14.-.-) (Vancomy...	28	9.7
60	NRF1_MOUSE (Q9WU00) Nuclear respiratory factor 1 (NRF-1) (Alpha ...	28	9.7
61	NRF1_HUMAN (Q16656) Nuclear respiratory factor 1 (NRF-1) (Alpha ...	28	9.7
62	RS5_RAT (P24050) 40S ribosomal protein S5	28	9.7
63	NRF1_BRARE (Q90X44) Nuclear respiratory factor 1 (Nrf-1) (Not re...	28	9.7
64	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	28	9.7
65	PDE6A_HUMAN (P16499) Rod cGMP-specific 3',5'-cyclic phosphodiest...	28	9.7
66	VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21	28	9.7
67	TAGAP_MOUSE (Q8K2L9) T-cell activation Rho GTPase-activating pro...	28	9.7
68	PEPE_SHEON (Q8EDL3) Peptidase E (EC 3.4.13.21) (Alpha-aspartyl d...	28	9.7
69	ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (...	28	9.7

>FUK_HUMAN (Q8N0W3) L-fucose kinase (EC 2.7.1.52) (Fucokinase)|
          Length = 1084

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 35/114 (30%), Positives = 54/114 (47%)
 Frame = +3

Query: 66  RFPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAADV 245
           + P  T  LAV DP+  R+GSG ATL+A+     HL ++A    +            +DV
Sbjct: 37  QIPAGTLLLAVEDPE-KRVGSGGATLNALLVAAEHLSARAGFTVV-----------TSDV 84

Query: 246 PLASVVRFMATKHVLLLHAGGDSKRVPWANPMGKAFLPVPYLAGDNPDGPVPLL 407
                   + +  +L+LH G D    P+ +  G+AF  +P    +NP+ PV  L
Sbjct: 85  --------LHSAWILILHMGRD---FPF-DDCGRAFTCLPV---ENPEAPVEAL 123

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>FPGT_HUMAN (O14772) Fucose-1-phosphate guanylyltransferase (EC 2.7.7.30)|
           (GDP-L-fucose pyrophosphorylase) (GDP-L-fucose
           diphosphorylase)
          Length = 594

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 25/88 (28%), Positives = 40/88 (45%)
 Frame = +3

Query: 102 DPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAADVPLASVVRFMATK 281
           DP GA+IG+G +TL A+       L +   ++   F                        
Sbjct: 77  DPAGAKIGNGGSTLCAL-----QCLEKLYGDKWNSFT----------------------- 108

Query: 282 HVLLLHAGGDSKRVPWANPMGKAFLPVP 365
            +LL+H+GG S+R+P A+ +GK F  +P
Sbjct: 109 -ILLIHSGGYSQRLPNASALGKIFTALP 135

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>GATA4_MOUSE (Q08369) Transcription factor GATA-4 (GATA-binding factor 4)|
          Length = 440

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
 Frame = -3

Query: 406 SSGTGPSGLSPAR*GTGRKAFPMGFAHGTLLLSPPAWSSSTCLVAMKRTTEASGTSAAEE 227
           SSG GPSG  P     G   +    A G     PP     +          A+  +AA E
Sbjct: 70  SSGAGPSGAGPGT-QQGSPGWSQAGAEGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAARE 128

Query: 226 PVA--SGRNSAISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGTARAAVEGG 71
             A  SG  +A + L   E+  R   A ++S   P  M     S  A AA   G
Sbjct: 129 AAAYGSGGGAAGAGLAGREQYGRPGFAGSYSSPYPAYMADVGASWAAAAAASAG 182

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>OTX1_MOUSE (P80205) Homeobox protein OTX1|
          Length = 355

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
 Frame = -3

Query: 310 SPPAWSSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVA------WERRWRTREAT 149
           +PPA SSS    +   +  A+  +AA   +     +A SSL        W     +  + 
Sbjct: 128 TPPAVSSSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPASISPGSA 187

Query: 148 AWSVAAPEPMRAPS-GSGTARAAVEGGKRARRRWPGSINQ 32
             SV+ PEP+ APS  S   R+   G   A   +P S  Q
Sbjct: 188 PTSVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQ 227

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>OTX1_HUMAN (P32242) Homeobox protein OTX1|
          Length = 354

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
 Frame = -3

Query: 310 SPPAWSSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVA------WERRWRTREAT 149
           +PPA SSS    +   ++ A+  +AA   +     +A SSL        W     +  + 
Sbjct: 128 TPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSA 187

Query: 148 AWSVAAPEPMRAPSG-SGTARAAVEGGKRARRRWPGSINQ 32
             SV+ PEP+ APS  S   R+   G   A   +P S  Q
Sbjct: 188 PASVSVPEPLAAPSNTSCMQRSVAAGAATAAASYPMSYGQ 227

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>OTX1_RAT (Q63410) Homeobox protein OTX1|
          Length = 355

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
 Frame = -3

Query: 310 SPPAWSSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVA------WERRWRTREAT 149
           +PPA SSS    +   +  A+  +AA   +     +A SSL        W     +  + 
Sbjct: 128 TPPAVSSSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPASISPGSA 187

Query: 148 AWSVAAPEPMRAPS-GSGTARAAVEGGKRARRRWPGSINQ 32
             SV+ PEP+ APS  S   R+   G   A   +P S  Q
Sbjct: 188 PASVSVPEPLGAPSNASCMQRSVAAGAATAATSYPMSYGQ 227

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>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein homolog)|
          Length = 867

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 20/79 (25%), Positives = 36/79 (45%)
 Frame = -3

Query: 340 MGFAHGTLLLSPPAWSSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVAWERRWRT 161
           + +   T + +PP   SSTC+    ++  A GT+   +P  SG    + S+       ++
Sbjct: 570 ISYLAATTVSAPPVLLSSTCISPNSKSVPAHGTTLNAQPAGSGAMDPVCSV-------QS 622

Query: 160 REATAWSVAAPEPMRAPSG 104
           R+     +A+  P   PSG
Sbjct: 623 RQV----LASSSPPSTPSG 637

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>KLF15_HUMAN (Q9UIH9) Krueppel-like factor 15 (Kidney-enriched kruppel-like|
           factor)
          Length = 416

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 28/86 (32%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
 Frame = +3

Query: 180 QATKEEIAEFLPEATGSSAADVP------LASVVRFMATKHVLLLHAGGDSKR----VPW 329
           Q T EEI EFL E       +VP      L +  +  A  H   LH G   +      P 
Sbjct: 138 QPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPG 197

Query: 330 ANPMGKAFLPVPYLAGDNPDGPVPLL 407
               G A  P     G  PDGP+P+L
Sbjct: 198 GASAGGAQGPG---GGPTPDGPIPVL 220

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>TLX2_MOUSE (Q61663) T-cell leukemia homeobox protein 2 (Homeobox protein|
           Hox-11L1) (Homeobox TLX-2) (PMUR10F)
          Length = 284

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = +3

Query: 3   RSTGSARGGDWLMEPGHRRLARFPPSTAALAVPDPDGARIGSGAATL 143
           R +G   GG  +  P HR L   PPS AA AVP P G     G A L
Sbjct: 71  RGSGVGPGGV-IRVPAHRPLPVPPPSGAAPAVPGPSGLGGAGGLAGL 116

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>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +2

Query: 329 GEPHGEGLPAGALPGRGQPRRASPAALRPHPR 424
           G PHG    + A P   +PRR    ALRP PR
Sbjct: 98  GRPHGNTTASTAPPRHPRPRRPGGPALRPTPR 129

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>ISPE_PORGI (Q7MVU8) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 274

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 29/104 (27%), Positives = 40/104 (38%)
 Frame = +3

Query: 54  RRLARFPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSS 233
           RR   FPP T  L    P GA +G G++    +  LVR   S    +E    +    G  
Sbjct: 75  RRKFDFPPLTIELIKHIPSGAGLGGGSSNASFMLKLVRDYFSLPIDDEELAAIALTIG-- 132

Query: 234 AADVPLASVVRFMATKHVLLLHAGGDSKRVPWANPMGKAFLPVP 365
            AD P      F+  + VL             A  +G+ F P+P
Sbjct: 133 -ADCPF-----FVGNRPVL-------------ATDLGQVFTPLP 157

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>GATA4_RAT (P46152) Transcription factor GATA-4 (GATA-binding factor 4)|
           (DNA-binding protein GATA-GT2)
          Length = 440

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
 Frame = -3

Query: 406 SSGTGPSGLSPAR*GTGRKAFPMGFAHGTLLLSPPAWSSSTCLVAMKRTTEASGTSAAEE 227
           SSG GPSG  P     G   +    A G     PP     +          A+  +AA E
Sbjct: 70  SSGAGPSGAGPGT-QQGSPGWSQAGAEGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAARE 128

Query: 226 PVA--SGRNSAISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGTARAAVEGG 71
             A  S   +A + L   E+  R   A ++S   P  M     S  A AA   G
Sbjct: 129 AAAYSSSGGAAGAGLAGREQYGRPGFAGSYSSPYPAYMADVGASWAAAAAASAG 182

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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
 Frame = -3

Query: 406 SSGTGPSGLSPAR*GTGRKAFPMGFAHGTLLLSPPA----WSSSTCLVAMKRTTEASGTS 239
           SS T  S L+ +   +   A P   A  + L S  A     SSS    ++  TT A+ TS
Sbjct: 151 SSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 210

Query: 238 AAEEPVASGRNS-----AISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGTARAAVEG 74
           ++    A+  ++     A SSL +      T  + + +V++  P+ + + +  A +A   
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASAT 270

Query: 73  GKRARRRWPGSINQSPPRALPV 8
              A+      +  S P + P+
Sbjct: 271 SSSAQYNTSSLLPSSTPSSTPL 292

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>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24|
          Length = 256

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/58 (37%), Positives = 28/58 (48%)
 Frame = -3

Query: 268 KRTTEASGTSAAEEPVASGRNSAISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGT 95
           KRTT     S++E    SG  SA+SS     +    +  T  SVA    +RAPS S T
Sbjct: 11  KRTTIIDSDSSSE---GSGDESALSSAFKRRKNDTQKRTTPTSVATSTKVRAPSFSST 65

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>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 323 SVGEPHGEGLPAGALPGRGQPRRASPAALRP 415
           S G    +  PAG  PGR  P +ASPA   P
Sbjct: 16  SAGASPAQASPAGTPPGRASPAQASPAQASP 46



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +2

Query: 353 PAGALPGRGQPRRASPAALRP 415
           PAG  PGR  P RASPA   P
Sbjct: 61  PAGTPPGRASPGRASPAQASP 81



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 353 PAGALPGRGQPRRASPAALRP 415
           PAG  PGR  P +ASPA   P
Sbjct: 46  PAGTPPGRASPAQASPAGTPP 66

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>ISPE_AQUAE (O67060) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 268

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +3

Query: 105 PDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAADVP 248
           P GA +G G++ L  V   V  LL     E   E L E  GS +AD P
Sbjct: 88  PPGAGLGGGSSNLAVVLKKVNELLGSPLSE---EELRELVGSISADAP 132

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>EPAS1_RAT (Q9JHS1) Endothelial PAS domain-containing protein 1 (EPAS-1)|
           (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2
           alpha)
          Length = 874

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 45  PGHRRLARFPPSTAALAVPD--PDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPE 218
           PG    + FPP   A    D  P GA+ GSG A+     S   +LL + T+ +    +PE
Sbjct: 795 PGENAKSGFPPQCYASPFQDYSPPGAQKGSGVASRLLGPSFEPYLLPELTRYDCEVNVPE 854

Query: 219 ATGSS 233
              S+
Sbjct: 855 PGSST 859

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>RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated proteins B and|
           B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB')
          Length = 240

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 320 GSVGEPHGE----GLPAGALPGRGQPRRASPAALRPHP 421
           G +G P G     G P G  PGRG P    P  +RP P
Sbjct: 187 GMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPP 224

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>RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated protein B'|
           (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB')
          Length = 240

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 320 GSVGEPHGE----GLPAGALPGRGQPRRASPAALRPHP 421
           G +G P G     G P G  PGRG P    P  +RP P
Sbjct: 187 GMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPP 224

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>RSMB_CHICK (Q9PV94) Small nuclear ribonucleoprotein-associated protein B'|
           (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB')
          Length = 240

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 320 GSVGEPHGE----GLPAGALPGRGQPRRASPAALRPHP 421
           G +G P G     G P G  PGRG P    P  +RP P
Sbjct: 187 GMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPP 224

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>PAPI_ECOLI (P04743) Major pilus subunit operon regulatory protein|
          Length = 77

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +3

Query: 174 LSQATKEEIAEFLPEATGSSAADVPLA-SVVRFMATKHVLLLHAGGDSKRVPWANPMGKA 350
           +S+  K EI EFL    G   A++  A +V  + A  ++LLL   G  +R P    M   
Sbjct: 1   MSEYMKNEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATY 60

Query: 351 -FLPVPYLAGDN 383
            FL     AG N
Sbjct: 61  WFLKGEMQAGQN 72

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>ISPE_CAUCR (Q9A8L7) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 295

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
 Frame = +3

Query: 24  GGDWLM----EPGHRRLAR-FPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQAT 188
           GGD L+    +  HRRL    PP    L    P  A +G G++   A   L+R  L+ A 
Sbjct: 69  GGDNLVVRAGQAFHRRLGGPVPPYRLILEKHLPIAAGLGGGSSDAGAALKLLRDALAPAL 128

Query: 189 KEEIAEFLPEATGSSAADVPLASVV-------RFMATKHVLLLHAGGDSKRVPWANPMGK 347
            ++  E L  + G+  A    A  +       R      +  L+A   +   P  +P G 
Sbjct: 129 SDDDLEALAASLGADGAACLRARALIAEGRGERLSPAPRLPELNAVLVNPGAP--SPTGA 186

Query: 348 AFLPVPYLAGDNPDG-PVPLLFDHI 419
            +    Y AG +PDG  +P + DH+
Sbjct: 187 VYR--AYDAGVHPDGAAMPPMPDHL 209

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>RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB) (SM11) (Fragment)
          Length = 214

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 320 GSVGEPHGE----GLPAGALPGRGQPRRASPAALRPHP 421
           G +G P G     G P G  PGRG P    P  +RP P
Sbjct: 170 GMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPP 207

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>RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB)
          Length = 231

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 320 GSVGEPHGE----GLPAGALPGRGQPRRASPAALRPHP 421
           G +G P G     G P G  PGRG P    P  +RP P
Sbjct: 187 GMMGPPPGMRPPMGPPMGLPPGRGTPMGMPPPGMRPPP 224

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>SUBT_BACS9 (P28842) Subtilisin precursor (EC 3.4.21.62)|
          Length = 420

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +3

Query: 123 GSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAADVPLASVVRFMATKHVLLLHA 302
           GSG A    +A+ +RH   QAT       +  + GSS     + + V +   K VL++ A
Sbjct: 219 GSGYAD--DIAAAIRHAGDQATALNTKVVINMSLGSSGESSLITNAVNYSYNKGVLIIAA 276

Query: 303 GGDS 314
            G+S
Sbjct: 277 AGNS 280

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>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1|
          Length = 2173

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
 Frame = +3

Query: 39   MEPGH-------RRLARFPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQA---T 188
            +EP H       R+ +R  P  A  A P+P  +   +   T    +   R   +++   T
Sbjct: 1100 LEPFHPKPKIITRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKT 1159

Query: 189  KEEIAEFLPEATGSSAADVPLASVVRFMATK 281
             E +   +PE   S++ D P+AS     AT+
Sbjct: 1160 PEPVVPTVPELQPSTSTDQPVASEPTSQATR 1190

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>KS7A_ECOLI (P62584) P fimbrial regulatory protein KS71A|
          Length = 77

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 174 LSQATKEEIAEFLPEATGSSAADVPLA-SVVRFMATKHVLLLHAGGDSKRVP 326
           +S+  K EI EFL    G   A++  A +V  + A  ++LLL   G  +R P
Sbjct: 1   MSEYMKNEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSP 52

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>KS7A_ECOL6 (P62585) P fimbrial regulatory protein KS71A|
          Length = 77

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 174 LSQATKEEIAEFLPEATGSSAADVPLA-SVVRFMATKHVLLLHAGGDSKRVP 326
           +S+  K EI EFL    G   A++  A +V  + A  ++LLL   G  +R P
Sbjct: 1   MSEYMKNEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSP 52

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>P3A2_STRPU (Q04073) DNA-binding protein P3A2|
          Length = 459

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 325 RGRTPWGRPSCRCLTWPGTTP 387
           RG+  WG+ SCR + WP   P
Sbjct: 186 RGKPGWGKESCRPVWWPSDLP 206

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>LEU3_CORJK (Q4JUQ0) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 338

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +3

Query: 12  GSARGGDWLMEPGHRRLARFPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQATK 191
           G A  G+  ++P  +  + F P   +   PD  G  I    A + +VA ++RHL   A  
Sbjct: 250 GLAASGN--IDPSRKNPSMFEPVHGS--APDIAGQGIADPCAAILSVALMLRHLGDDANA 305

Query: 192 EEI-AEFLPEATGSSAADVPLASV 260
           E I A  L EA       V  A V
Sbjct: 306 ERIEAAVLAEAGSRDGGPVKTAEV 329

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>DXR_RHOBA (Q7URM5) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 455

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = -3

Query: 295 SSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVAWERRWRTREATAWSVAAPEPMR 116
           +  T +VA    T A+  + A+       +SAI   +A  R  +++ ATA     PE +R
Sbjct: 159 NKETLVVAGPVVTRAAANNGAQLLPVDSEHSAIFQCLAESRARQSQYATAKQSIQPESVR 218

Query: 115 A--PSGSGTARAAVEGGKRARRRWPG 44
           A  P  S T          A+  WPG
Sbjct: 219 ATDPPSSTT-------DSPAKTHWPG 237

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>ROLC_NICGL (P07051) Cytokinin-beta-glucosidase (EC 3.2.1.-) (Protein ROL C)|
          Length = 180

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 349 AFPMGFAHGTLLLSPPAWSSSTCLVAMKR-TTEASGTSAAEEPVASGRNSAIS 194
           +FP    HG LL + P +     L  + R   +ASG    E+P+ S   +A+S
Sbjct: 78  SFPYNSRHGALLTNLPPYQKDVSLSEVSRGLRQASGFFGYEDPIRSAYFAALS 130

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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 326  VGEPHGEGLPAGALPGRG-QPRRASPAALRPH 418
            +G   G GL  G +P  G +P RA+PA LR H
Sbjct: 1825 MGTAQGVGLKPGPVPEPGAEPHRATPAELRSH 1856



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +2

Query: 335 PHGEGLPAGALPGRGQPR--RASPAALRPHPR 424
           P G G P+G+LP +  P+  +ASP A +  P+
Sbjct: 556 PQGLGQPSGSLPAKASPQATKASPQATKASPQ 587



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 317 EGSVGEPHGEGLPAGALPGRGQPRRASPAA 406
           EGS+GEP    LP    P  G P RA+ AA
Sbjct: 520 EGSLGEPAPLPLPTPQQPPAGVPHRAAGAA 549

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>Y1855_MYCBO (P64894) Hypothetical protein Mb1855|
          Length = 121

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = -2

Query: 389 VGVVPGQVRHRQEGLPHGVRPRNPLAVAAGVEQQHVLGGHEAY 261
           VG+V G V H   G+P  ++P  P+AV A ++   V GG  AY
Sbjct: 20  VGIVLGLVFH--PGVPEVIQPYLPIAVVAALDA--VFGGLRAY 58

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>Y1824_MYCTU (P64893) Hypothetical protein Rv1824/MT1872|
          Length = 121

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = -2

Query: 389 VGVVPGQVRHRQEGLPHGVRPRNPLAVAAGVEQQHVLGGHEAY 261
           VG+V G V H   G+P  ++P  P+AV A ++   V GG  AY
Sbjct: 20  VGIVLGLVFH--PGVPEVIQPYLPIAVVAALDA--VFGGLRAY 58

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>GDF7_HUMAN (Q7Z4P5) Growth/differentiation factor 7 precursor (GDF-7)|
          Length = 450

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = -3

Query: 247 GTSAAEEP---VASGRNSAISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGTARA-AV 80
           G SAAEE    V S R     SL    R  R +     +  A EP+  P G+GTA   AV
Sbjct: 258 GGSAAEERAVLVVSSRTQRKESLF---REIRAQARALGAALASEPLPDP-GTGTASPRAV 313

Query: 79  EGGKRARR 56
            GG+R RR
Sbjct: 314 IGGRRRRR 321

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>YXKO_BACSU (P94368) Hypothetical protein yxkO|
          Length = 276

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 350 LPAGALPGRGQPRRASPAALRPHP 421
           L AGAL  R  P+R  P  L PHP
Sbjct: 127 LDAGALAKRTYPKREGPVILTPHP 150

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>VG65_ICHV1 (Q00106) Hypothetical gene 65 protein|
          Length = 1434

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -3

Query: 139  VAAPEPMRAPSGS-GTARAAVEGGKRARRRWPGSINQSPPR 20
            V+ PEPM AP G   T    V G K  R   P  I  S PR
Sbjct: 994  VSPPEPMSAPGGEPATGTTGVRGFKSERLILPRKIMSSIPR 1034

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>CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic linker-associated|
            protein 1) (Multiple asters homolog 1)
          Length = 1538

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 115  APSGSGTARAAVEGGKRARRRWPGSINQSPPRALPVDR 2
            +P+  G   + VEGG+ A       +N  PPRA P  R
Sbjct: 1223 SPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPR 1260

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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +2

Query: 335 PHGEGLPAGALPGRGQPR--RASPAALRPHPR 424
           P G G P+G+LP +  P+  +ASP A +  P+
Sbjct: 554 PQGPGQPSGSLPPKASPQAAKASPQAAKASPQ 585

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>ADA2A_HUMAN (P08913) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2
           adrenergic receptor subtype C10)
          Length = 450

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 124 PMRAPSGSGTARAA-VEGGKRARRRWPGSINQSPPRALP 11
           P R P G G ARA+ V+ G    RR PG+     P A P
Sbjct: 311 PERGPRGKGKARASQVKPGDSLPRRGPGATGIGTPAAGP 349

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>PSD1_CAEEL (Q18115) 26S proteasome non-ATPase regulatory subunit 1 (26S|
            proteasome regulatory subunit rpn-2)
          Length = 965

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
 Frame = -3

Query: 217  SGRNSAISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGTARAAV-------EGGKRAR 59
            +G+ +A   L+A E++ R   A+A S AA     + S SGTA AA        + GK  +
Sbjct: 815  TGKKNASKKLIAEEKKRREAAASASSAAAAPS--SSSTSGTAPAAEDEKMEVDQPGKSKK 872

Query: 58   RRWPGSIN------QSPPRALPVDR 2
             + P          Q+P R +P  R
Sbjct: 873  EKAPEKDTKPLHRLQNPARVIPAQR 897

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>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A|
          Length = 634

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 23/95 (24%), Positives = 40/95 (42%)
 Frame = -3

Query: 316 LLSPPAWSSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVAWERRWRTREATAWSV 137
           LL    W+ S C     +T E    SA+ E V +G   A+    A   + ++ +  A + 
Sbjct: 102 LLHTLVWAWSLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAE 161

Query: 136 AAPEPMRAPSGSGTARAAVEGGKRARRRWPGSINQ 32
              + +   +    ARA  +  K AR+R+   + Q
Sbjct: 162 ERRKTLSEETRQHQARAQYQ-DKLARQRYEDQLKQ 195

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>YGB7_SCHPO (O74779) Protein C25B2.07c|
          Length = 501

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 15/132 (11%)
 Frame = -3

Query: 358 GRKAFPMGFAHGTLLLSPPAWSSSTCLVA-------MKRTTEASGTSAAEEPVASGRNSA 200
           G + F    A  T   +  A S+ST  VA       + R  +A   S  E+   + +NS+
Sbjct: 292 GSRIFRENSASNTQRPNVSATSNSTVRVASSLAVRPVSRNAQARTPSRLEQREVNVKNSS 351

Query: 199 ISSLVAWERRWRTREATAWSVAAPEPM------RAPSGSGTARAA--VEGGKRARRRWPG 44
              +         R  T+  V +P  +      R  +G+   +AA  V       RR P 
Sbjct: 352 AKIV---------RPGTSLGVRSPSRIQSTLSSRTTTGNVRTKAANIVRPSSSINRRPPS 402

Query: 43  SINQSPPRALPV 8
           SINQ PP  L +
Sbjct: 403 SINQRPPSNLRI 414

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>TIP1_YEAST (P27654) Temperature shock-inducible protein 1 precursor (EC|
           3.1.1.-)
          Length = 210

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 24/77 (31%), Positives = 32/77 (41%)
 Frame = -3

Query: 292 SSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSLVAWERRWRTREATAWSVAAPEPMRA 113
           SS    A+   + AS  +A+    AS   +A SS           EAT  S AAP    A
Sbjct: 101 SSEIAAALASVSPASSEAASSSEAASSSKAASSS-----------EAT--SSAAPSSSAA 147

Query: 112 PSGSGTARAAVEGGKRA 62
           PS S    ++ E   +A
Sbjct: 148 PSSSAAPSSSAESSSKA 164

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>URE3_KLEAE (P18316) Urease gamma subunit (EC 3.5.1.5) (Urea amidohydrolase|
           gamma subunit)
          Length = 100

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = +3

Query: 54  RRLAR-----FPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPE 218
           RRLAR     +P S A ++    +GAR G   A+L       RH+L   T+E++ E +PE
Sbjct: 22  RRLARGLKLNYPESVALISAFIMEGARDGKSVASLMEEG---RHVL---TREQVMEGVPE 75

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>HEM3_CORDI (Q6NJK0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 294

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +2

Query: 350 LPAGALPGRGQPRRASP-AALRP 415
           LPAGAL G G PRR S   ALRP
Sbjct: 109 LPAGALIGTGAPRRISQIKALRP 131

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>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
 Frame = +1

Query: 271 WPPSTCCCSTPAATARGFRGRTP---WGRPSCRC 363
           W   TCCC  P        G T    W +  CRC
Sbjct: 146 WNKDTCCCGCPVNMQEPADGCTKPLIWDKVDCRC 179

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>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney|
            disease protein 1)
          Length = 4303

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
 Frame = +3

Query: 33   WLMEPGHRRLARF-PPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEF 209
            W    G + L +F PP   +  VPDP  A++      +H  A+   +LL+          
Sbjct: 1055 WNFGDGEQALHQFQPPYNESFPVPDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENL 1114

Query: 210  LPEATGSSAADVPLASV 260
              +   S  A +P  +V
Sbjct: 1115 TQQVPVSVRASLPSVAV 1131

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>LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein) (Warts-like kinase)
          Length = 1088

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
 Frame = +3

Query: 69  FPPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQA--------TKEEIAEFLPEAT 224
           FPP  A L VP P   + G  A  LH + S  +   S +        ++  +   L E +
Sbjct: 304 FPPPAAGLYVPHPHHKQAGPAAHQLHVLGSRSQVFASDSPPQSLLTPSRNSLNVDLYELS 363

Query: 225 GSSAADVPLASVVR 266
            +S    P A++ R
Sbjct: 364 STSVQQWPAATLAR 377

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>TLX2_HUMAN (O43763) T-cell leukemia homeobox protein 2 (Homeobox protein|
           Hox-11L1) (Neural crest homeobox protein)
          Length = 284

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +3

Query: 6   STGSARGGDWLMEPGHRRLARFPPSTAALAVPDPDGARIGSGAATL 143
           S+G   GG  +  P HR L   PP+  A AVP P G     G A L
Sbjct: 72  SSGVGPGGV-IRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGL 116

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>ISPE_DESDG (Q30ZH4) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 327

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +3

Query: 72  PPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAADVP 248
           PP    LA   PDGA +G G+A   AV  L+          + A  L +      ADVP
Sbjct: 86  PPMQVRLAKGVPDGAGLGGGSANAAAVLKLLNTAGGAPRFSDTA--LAKIAAQVGADVP 142

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>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)|
          Length = 892

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 304 PAWSSSTCLVAMKRTTEASGTSAAEEPVASGRNSAISSL 188
           P   SSTC+    ++  A GT+   +P ASG    + S+
Sbjct: 603 PVLLSSTCISPNSKSVPAHGTTLNAQPAASGAMDPVCSM 641

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>RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (RIM-binding protein 1) (RIM-BP1)
          Length = 1847

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
 Frame = -3

Query: 256  EASGTSAAEEP-----VASGRNSAISSLVAWERRWRTREATAWSVAAPEPMRAPSGSGTA 92
            EA GT+A   P     V SG N+ +  L AWE+    R   +      EP    + +G +
Sbjct: 1518 EAWGTAAVGRPRGPVKVNSGSNTYLR-LPAWEKGEPERRGRSAIGRTKEPPSRATETGES 1576

Query: 91   RAAVEGGKR------ARRRWPGSINQSPPRA 17
            R     G+R      AR    G+   +PPR+
Sbjct: 1577 RGQDNSGRRGPQRRGARVLRTGTTELAPPRS 1607

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>HEY1_MOUSE (Q9WV93) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy|
           and enhancer of split-related 1) (HESR-1)
          Length = 299

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
 Frame = +3

Query: 123 GSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAAD---VPLASVVRFMATKHVLL 293
           G G    HA+A   R L  +    E+A +L    G  A+D   V L S +   A++    
Sbjct: 109 GKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLLVRLVSHLNNYASQREAA 168

Query: 294 LHAGGDSKRVPWANPMGKAFLPVPYLA 374
             A G    +PW    G AF   P++A
Sbjct: 169 SGAHGGLGHIPW----GSAFGHHPHIA 191

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>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)|
          Length = 942

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 72  PPSTAALAVPDPDGARIGSGAATLHAVASLVRHLLSQAT 188
           P   A+++V D   AR+G+G   LH V++ ++ +L  A+
Sbjct: 694 PCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETAS 732

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>DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (Diglyceride|
           kinase theta) (DGK-theta) (DAG kinase theta)
          Length = 942

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
 Frame = +3

Query: 42  EPGHRRLARFPPST----------AALAVPDPDGARIGSGAATLHA 149
           +PGH  L R PPS+          A  AV   +G   GSG AT  A
Sbjct: 341 DPGHLELCRLPPSSQACDAWAGGKAGSAVISEEGRSPGSGEATPEA 386

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>RSMB_MONDO (Q9TU66) Small nuclear ribonucleoprotein-associated protein B'|
           (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB')
          Length = 240

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 347 GLPAGALPGRGQPRRASPAALRPHP 421
           G P G  PGRG P    P  +RP P
Sbjct: 200 GPPMGMPPGRGAPMGMPPPGMRPPP 224

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>C5A3_AMYOR (Q8RN05) Cytochrome P450 165A3 (EC 1.14.-.-) (Vancomycin|
           biosynthesis protein oxyA)
          Length = 391

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = -3

Query: 151 TAWSVAAPEPMRAPSGSGTARAAVE-GGKRARRRWPGSINQSPP 23
           T W     E  R   GS    A +  GG  A R WPG +NQ  P
Sbjct: 47  TGWLATGYEETRQVLGSDKFSAKLLFGGTAAGRIWPGFLNQYDP 90

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>NRF1_MOUSE (Q9WU00) Nuclear respiratory factor 1 (NRF-1) (Alpha|
           palindromic-binding protein) (Alpha-pal)
          Length = 503

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 325 RGRTPWGRPSCRCLTWPGTTP 387
           RG+  WG+ SC+ + WP   P
Sbjct: 219 RGKPGWGKESCKPIWWPEDIP 239

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>NRF1_HUMAN (Q16656) Nuclear respiratory factor 1 (NRF-1) (Alpha|
           palindromic-binding protein) (Alpha-pal)
          Length = 503

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 325 RGRTPWGRPSCRCLTWPGTTP 387
           RG+  WG+ SC+ + WP   P
Sbjct: 219 RGKPGWGKESCKPIWWPEDIP 239

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>RS5_RAT (P24050) 40S ribosomal protein S5|
          Length = 203

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 183 ATKEEIAEFLPEATGSSAAD-VPLASVVRFMATKHVLLLHAGGDSKRVPWANPMGKAFLP 359
           A KE+ A++LP + G  AA+    A         + +++H   + K++     +  AF  
Sbjct: 39  AVKEKYAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEI 98

Query: 360 VPYLAGDNP 386
           +  L G+NP
Sbjct: 99  IHLLTGENP 107

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>NRF1_BRARE (Q90X44) Nuclear respiratory factor 1 (Nrf-1) (Not really finished|
           protein)
          Length = 504

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 325 RGRTPWGRPSCRCLTWPGTTP 387
           RG+  WG+ SC+ + WP   P
Sbjct: 220 RGKPGWGKESCKPIWWPEDIP 240

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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 317  EGSVGEPHGEGLPA--GALPGRGQPRRASPAALRPHP 421
            +G+ GEP  +G P   G +  RG P R  P  LR  P
Sbjct: 1327 KGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIP 1363

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>PDE6A_HUMAN (P16499) Rod cGMP-specific 3',5'-cyclic phosphodiesterase|
           alpha-subunit (EC 3.1.4.35) (GMP-PDE alpha) (PDE V-B1)
          Length = 859

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 360 PAGRPSPWGSPTEPSCC 310
           P G PSP G+ T  SCC
Sbjct: 841 PGGNPSPGGATTSKSCC 857

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>VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21|
          Length = 1467

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 323  SVGEPHGEGLPAGALPGRGQPRRASPAALRPHPR 424
            S G PH +G+PAG  P  G P   +P A++  P+
Sbjct: 1150 SQGRPHMQGVPAGGPPMNG-PIPPNPMAMKMMPQ 1182

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>TAGAP_MOUSE (Q8K2L9) T-cell activation Rho GTPase-activating protein (T-cell|
           activation GTPase-activating protein)
          Length = 714

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 48  GHRRLARFPPSTAALAVPDPDGARIGSGAATLHAVASLVRH 170
           G  R   F PSTA   VP   G  +  G    H ++S+  H
Sbjct: 615 GSMRSRMFKPSTAVPPVPSHHGGDLSEGTPGGHRLSSVTEH 655

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>PEPE_SHEON (Q8EDL3) Peptidase E (EC 3.4.13.21) (Alpha-aspartyl dipeptidase)|
           (Asp-specific dipeptidase) (Dipeptidase E)
          Length = 236

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 93  AVPDPDGARIGSGAATLHAVASLVRHLLSQATKEEIAEFLPEATGSSAADVPLASV 260
           A+ D DG  IG G  T H +  L ++ L Q  +EE+ +  P    S+ ++V   S+
Sbjct: 78  ALKDADGILIGGGN-TFHLLHELYKYDLVQLIREEVLKGKPYIGWSAGSNVSGLSI 132

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>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 18) (DHHC-18)
          Length = 388

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 136 AAPEPMR-APSGSGTARAAVEGGKRARRRW 50
           AAP P R + SGSG+   +   G+R RR+W
Sbjct: 41  AAPAPPRWSSSGSGSGSGSGSLGRRPRRKW 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,952,230
Number of Sequences: 219361
Number of extensions: 1089956
Number of successful extensions: 6268
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 5642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6255
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result