>BCAS1_RAT (Q3ZB98) Breast carcinoma amplified sequence 1 homolog (Protein|
           whose mRNA is enriched in synaptosomes 2) (Pmes-2)
           (Fragment)
          Length = 555

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -1

Query: 423 TPNCSHAESPSNKKDSSFLSILFLIINNMDGAP 325
           +P  S AE+PS  KD SFL+ LF +    + AP
Sbjct: 142 SPPESQAEAPSRPKDFSFLNRLFKLDKGRESAP 174

>SL9A4_RAT (P26434) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4)|
           (NHE-4) (Solute carrier family 9 member 4)
          Length = 717

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -3

Query: 376 FLSLHSFSHNKQYGW---CTLLQYCLQLIVVSRITNFKVQNTFRS*DILLKEQ 227
           F+ + +   N ++ W   C  L +C     +S  T F V N FR+    +K+Q
Sbjct: 369 FMGVSTVGKNHEWNWAFVCFTLAFCQIWRAISVFTLFYVSNQFRTFPFSIKDQ 421


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,879,515
Number of Sequences: 219361
Number of extensions: 972418
Number of successful extensions: 1951
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)