ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl54e05 |
|---|---|
| Clone Library Name | barley_pub |
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 32.3 bits (72), Expect = 0.57 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 2/91 (2%) Frame = -2 Query: 322 LACSLSD--PPLTPISRTQPASLWGQSLRRRSTTTSLAVGRRTRTGVPCQSLRKLSPWVL 149 LA S S P T + + S + R TTT RRT T P + ++ + Sbjct: 394 LAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATS 453 Query: 148 SLPLSFTSSAPQLPTPPIRGSVERRSSVPTS 56 S S TSS T PI S S + TS Sbjct: 454 SSSTSTTSSKTPTTTRPISSSSSSSSGIVTS 484
>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin| synthase sulfurylase) (MPT synthase sulfurylase) Length = 464 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 198 GQVSPVNHSGSYHHGCFRCLFLSPPQPLNCLR 103 GQ++ NH+G C+RCLF +PP C R Sbjct: 219 GQLTVYNHNGG---PCYRCLFPTPPPTSACQR 247
>SH2D3_MOUSE (Q9QZS8) SH2 domain-containing protein 3C (SH2 domain-containing| Eph receptor-binding protein 1) (Cas/HEF1-associated signal transducer) Length = 854 Score = 31.2 bits (69), Expect = 1.3 Identities = 35/130 (26%), Positives = 46/130 (35%), Gaps = 11/130 (8%) Frame = -2 Query: 385 VPDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQSLRRRSTTTSLAVGR 206 +PD L P S + P TP + QPAS + RRS+ L G Sbjct: 395 IPDLHSPLSPISESPSSPAYSTVTRVHAPSATPSTSAQPAS----PVARRSSEPQLCPGN 450 Query: 205 ---------RTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLP-TPPIRGSVERRS-SVPT 59 R P +L K SP S S PP+RGS E+ + P Sbjct: 451 TPKPPGESDRAPHASPSHTLCKASPSPSLSSYSDPDSGHYCQLQPPVRGSREQAAGETPR 510 Query: 58 SPAGVGEEEE 29 G GE ++ Sbjct: 511 KARGSGERQK 520
>TKR_DROME (P14083) Protein TKR (dTKR)| Length = 1046 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -1 Query: 269 CLSVGTKSSEKIDDDESGGGPP--NEDRCPLSITPEAIT 159 C SVG+K S +D+D SG G P E R +S T +T Sbjct: 999 CKSVGSKQSSSVDEDYSGPGIPLSLEHRREISATGPPLT 1037
>FUT5_ARATH (Q9SJP4) Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5)| Length = 533 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = -2 Query: 235 STTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPTS 56 S T ++ R+ G SL L PW+L P +FT+ P PP S T Sbjct: 442 SLTDNIVTSARSTFGYVSYSLGGLKPWLLYQPTNFTT-----PNPPCVRSKSMEPCYLTP 496 Query: 55 PAGVGEEEEG 26 P+ E + G Sbjct: 497 PSHGCEADWG 506
>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)| (TRF1-interacting ankyrin-related ADP-ribose polymerase) Length = 1327 Score = 30.0 bits (66), Expect = 2.8 Identities = 31/119 (26%), Positives = 43/119 (36%) Frame = -2 Query: 382 PDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQSLRRRSTTTSLAVGRR 203 PD + P DG+S C+++ P+ P + +TS A G Sbjct: 75 PDRPRSPDPVDGTSCCSTTSTICTVAAAPVVP-----------------AVSTSSAAGVA 117 Query: 202 TRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEG 26 P S SP S P S +SS+P P + S E T+P G G G Sbjct: 118 PN---PAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPG 173
>BNI1_YEAST (P41832) Protein BNI1 (Synthetic lethal 39)| Length = 1953 Score = 30.0 bits (66), Expect = 2.8 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 3/104 (2%) Frame = -2 Query: 355 SDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQSLRRRSTTTSLAVGRRTRTGVPCQS 176 +DG+ + Q S PP P PA L+G+SL + + V + T P Sbjct: 1222 TDGAEDLSTQSSVLSSQPPPPPPPPPPVPAKLFGESLEKEKKSEDDTVKQETTGDSPAPP 1281 Query: 175 LRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSS---VPTSP 53 P + L F + P PP SV S+ +P +P Sbjct: 1282 PPPPPPPPPPMAL-FGKPKGETPPPPPLPSVLSSSTDGVIPPAP 1324
>MURD_SYNP6 (Q5MZA8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 463 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +1 Query: 253 VPTERQVGFWKSESMVDQRGSKPVFASPLEKIHPTG-ANPEGSLEQTGGQVFKGLDALRV 429 +PT R GFW E V RG + P+E+ G N + L G++A + Sbjct: 252 LPTSRDRGFWIEEGWVIDRGDR---LFPVERFSMVGNHNQQNLLMAVAAARLAGIEAEAI 308 Query: 430 SKAM 441 ++AM Sbjct: 309 AEAM 312
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 29.6 bits (65), Expect = 3.7 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 7/93 (7%) Frame = -1 Query: 443 PIALLTRRASRPLKTWPPVCSRL----PSGFAPV---GWIFSSGEAKTGLLPL*STIDSD 285 P + + ASR K+WPPV SR P F P+ + SS + +G+ P T D Sbjct: 3627 PSSSASPHASR--KSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMPTDDYS 3684 Query: 284 FQNPTCLSVGTKSSEKIDDDESGGGPPNEDRCP 186 ++ T L S+K D S P + CP Sbjct: 3685 EESDTDL------SQKSDGPASPVEGPKDPSCP 3711
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)| (FEL protein) Length = 1210 Score = 29.3 bits (64), Expect = 4.8 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 12/103 (11%) Frame = -2 Query: 295 LTPISRTQPASLWGQSLRRRSTTTSLAV---GRRTRTGVPCQSLRKLSPW---------V 152 L P++ +Q G R ++ V R+ R +P + + LSP + Sbjct: 703 LVPLTESQGPPHSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQSLM 762 Query: 151 LSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGR 23 + + L S PQ PP +GS +R++ PAG E R Sbjct: 763 VKITLDLLSRIPQ---PPGKGSRQRKAEDKQPPAGKKHSSEKR 802
>VTS1_NEUCR (Q7RZQ3) Protein VTS1| Length = 610 Score = 28.9 bits (63), Expect = 6.3 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 8/96 (8%) Frame = -2 Query: 358 PSDGSSQVE-KQKLACSLSDPPLTPISRTQPASLWGQS--LRRRSTTTSLAVGRRTRTGV 188 PS+ +S V+ + LA P I+ PAS WG S R +S+T +G+ + Sbjct: 238 PSNRNSLVDNRNSLAAPTVSGPKDDINGQNPASPWGPSDTSRPKSSTGQTPMGQFVQPPP 297 Query: 187 PCQSLRKLSPWVLS-----LPLSFTSSAPQLPTPPI 95 LR P LS + T++ PQL P+ Sbjct: 298 SAGGLRSPRPPQLSSNTNIQSTTLTAAEPQLTELPL 333
>ELM1_YEAST (P32801) Serine/threonine-protein kinase ELM1 (EC 2.7.11.1)| Length = 640 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/84 (25%), Positives = 38/84 (45%) Frame = -2 Query: 385 VPDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQSLRRRSTTTSLAVGR 206 +P + + P S + + +L PP+TP S+T S +G S ++ T S +G Sbjct: 7 IPTLIPEWAPLSQQSCIREDEL----DSPPITPTSQT---SSFGSSFSQQKPTYSTIIGE 59 Query: 205 RTRTGVPCQSLRKLSPWVLSLPLS 134 T L ++ P+V + +S Sbjct: 60 NIHT-----ILDEIRPYVKKITVS 78
>ELHA_APLCA (P01360) Atrial gland peptide A precursor (ELH-18) [Contains:| Atrial gland peptide A; Califin A; Califin A large subunit; Califin A small subunit] Length = 173 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 310 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 399 G++P F +P + +P G G +EQ+ GQ Sbjct: 54 GAQPYFMTPRLRFYPIGKRAAGEMEQSEGQ 83
>ELHL_APLCA (P01361) Atrial gland peptide B precursor (ELH-1L)| Length = 122 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 310 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 399 G++P F +P + +P G G +EQ+ GQ Sbjct: 54 GAQPYFMTPRLRFYPIGKRAAGGMEQSEGQ 83
>NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking regulator 2)| Length = 2936 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 142 PLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGRFL 17 P +F + + TP ++ SSVP + +G+GEE+ L Sbjct: 1635 PATFPDTVKEKETPTPGEDIQLESSVPHTDSGMGEEQVASIL 1676
>DIS1_SCHPO (Q09933) Phosphoprotein p93| Length = 882 Score = 28.5 bits (62), Expect = 8.2 Identities = 26/92 (28%), Positives = 40/92 (43%) Frame = -2 Query: 325 KLACSLSDPPLTPISRTQPASLWGQSLRRRSTTTSLAVGRRTRTGVPCQSLRKLSPWVLS 146 KLA + P P S ASL +SL RS+ T + + T + QSL ++ Sbjct: 559 KLAVTPQAPSPLPSSNPSQASLTEESLSTRSSPT-----KPSTTSLRSQSL-------VN 606 Query: 145 LPLSFTSSAPQLPTPPIRGSVERRSSVPTSPA 50 S T AP + + + + S P+SP+ Sbjct: 607 RFASSTLKAPSSSSKGVSNAASSKQSFPSSPS 638
>AT10D_MOUSE (Q8K2X1) Probable phospholipid-transporting ATPase VD (EC 3.6.3.1)| (ATPVD) Length = 1416 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -2 Query: 241 RRSTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVP 62 RRS++ SLA G+ + +G PC + ++S + S P+L +PP+ + +P Sbjct: 634 RRSSSPSLASGKDSSSGTPCAFVSRISFF----------SRPKL-SPPMEDESSQMDEIP 682 Query: 61 ---TSPAGVGEEEEGRFLSLS 8 S E + R + LS Sbjct: 683 QASNSACCTETEAQNRAVGLS 703
>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding| factor 1) (Cellular transcription factor ILF-1) Length = 655 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = -2 Query: 232 TTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQL--PTPPIRGSVERRSSVPT 59 T T+L+ +R + ++ + P + L ++ + L P P G++ +S P+ Sbjct: 148 TFTALSSEKREKQEASESPVKAVQPHISPLTINIPDTMAHLISPLPSPTGTISAANSCPS 207 Query: 58 SPAGVG 41 SP G G Sbjct: 208 SPRGAG 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,462,932 Number of Sequences: 219361 Number of extensions: 1440227 Number of successful extensions: 5001 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4744 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4995 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
