ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds 833 0.0
2dbj|AB244278.1| Oryza sativa (japonica cultivar-group) OML3 mRNA... 121 2e-24
3dbj|AK121634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
4dbj|AK120322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
5dbj|AK074004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
8gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
9gb|AY579885.1| Sorghum bicolor AML1 mRNA, complete cds 62 2e-06
10gb|AY579890.1| Hordeum vulgare AML6 gene, partial cds 60 7e-06
11ref|NM_179270.1| Arabidopsis thaliana DNA binding AT1G06230 tran... 44 0.39
12ref|NM_100505.2| Arabidopsis thaliana DNA binding AT1G06230 tran... 44 0.39
13emb|BX816821.1|CNS0AEK3 Arabidopsis thaliana Full-length cDNA Co... 44 0.39
14gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thali... 44 0.39
15gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 42 1.5
16dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 1.5
17ref|XM_514528.1| PREDICTED: Pan troglodytes sorting nexin 5 (LOC... 40 6.1
18gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.1
19gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome ... 40 6.1
20emb|BX323043.5| Human DNA sequence from clone CTD-2510L9 on chro... 40 6.1
21dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.1
22gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, compl... 40 6.1
23gb|AC007920.18| Homo sapiens 3 BAC RP11-208N14 (Roswell Park Can... 40 6.1
24gb|AC079015.8| Homo sapiens chromosome 8, clone RP11-489O18, com... 40 6.1
25gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Ca... 40 6.1
26gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Can... 40 6.1
27gb|AC084425.1|CBRG01B5 Caenorhabditis briggsae cosmid G01B5, com... 40 6.1
28gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, comp... 40 6.1
29dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.1
30emb|BX005055.5| Zebrafish DNA sequence from clone CH211-188N23 i... 40 6.1
31gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.1
32gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complet... 40 6.1
33emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chro... 40 6.1
34emb|AJ308491.1|ODI308491 Oikopleura dioica mRNA for Oikosin1 pro... 40 6.1 
>gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds
          Length = 3269

 Score =  833 bits (420), Expect = 0.0
 Identities = 432/436 (99%)
 Strand = Plus / Plus

                                                                       
Query: 16  agagaaagcgtccttcttcctcctccccgactccggccggcgaggtcgggacggagctcc 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agagaaagcgtccttcttcctcctccccgactccggccggcgaggtcgggacggagctcc 60

                                                                       
Query: 76  gccgctccaccgagccgcggatcggtggcgtaggcagttgaggggctgaggaggtgaaag 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gccgctccaccgagccgcggatcggtggcgtaggcagttgaggggctgaggaggtgaaag 120

                                                                       
Query: 136 aaagaggcaacgaaagcacccatggtgatagcttccggagtgattgacaggggacacctg 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagaggcaacgaaagcacccatggtgatagcttccggagtgattgacaggggacacctg 180

                                                                       
Query: 196 tcctcgttcggcggcccaccgccagactcgtcgtcgtcgatcttctccgaagactttgtc 255
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 181 tcctcgttcggcggcccaccgccagactcgtcgtcgtcgttcttctccgaagaccttgtc 240

                                                                       
Query: 256 cccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcagagagggagc 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcagagagggagc 300

                                                                       
Query: 316 aagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatcctgaaggc 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatcctgaaggc 360

                                                                       
Query: 376 agtctggaacaaacagggggccaagtcttcaagggcctagatgcccttcgcgtcagtaag 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 361 agtctggaacaaacagggggccaagtcttcaagggcctagatgcccttcgcgtcagtaaa 420

                           
Query: 436 gcgatggggcagggaa 451
           ||||||||||| ||||
Sbjct: 421 gcgatggggcaaggaa 436
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>dbj|AB244278.1| Oryza sativa (japonica cultivar-group) OML3 mRNA for MEI2-like RNA
           binding protein, complete cds
          Length = 2868

 Score =  121 bits (61), Expect = 2e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcagagag 310
           ||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| | ||
Sbjct: 95  ttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcacaaag 154

                                                                    
Query: 311 ggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
           |||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 155 ggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 211



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 157 atggtgatagcttccggagtgattgacaggggacacctgtc 197
           |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 1   atggtgatagcttctggagccattgacaggaggcacctgtc 41
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>dbj|AK121634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050M15, full
           insert sequence
          Length = 3869

 Score =  121 bits (61), Expect = 2e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcagagag 310
           ||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| | ||
Sbjct: 746 ttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcacaaag 805

                                                                    
Query: 311 ggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
           |||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 806 ggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 862



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 151 gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 197
           ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 646 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 692
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>dbj|AK120322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C20, full
           insert sequence
          Length = 3454

 Score =  121 bits (61), Expect = 2e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcagagag 310
           ||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| | ||
Sbjct: 309 ttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcacaaag 368

                                                                    
Query: 311 ggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
           |||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 369 ggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 425



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 151 gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 197
           ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 209 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 255
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>dbj|AK074004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075L18, full
           insert sequence
          Length = 3468

 Score =  121 bits (61), Expect = 2e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgtccccacagagaggcaggttgggttctggaaatcggagtcaatggtggatcagagag 310
           ||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||| | ||
Sbjct: 345 ttgtccctacagagaggcaagttggattttggaattcagagtcaatggtggatcacaaag 404

                                                                    
Query: 311 ggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
           |||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 405 ggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 461



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 151 gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 197
           ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 245 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 291
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 309    agggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
              |||||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 134425 agggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 134367



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 151    gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 197
              ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 135316 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 135270



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 263    agaggcaggttgggttctggaaatcggagtcaatggtggatca 305
              ||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 135097 agaggcaagttggattttggaattcagagtcaatggtggatca 135055
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 309   agggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
             |||||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 16613 agggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 16555



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 151   gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 197
             ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 17504 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 17458



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 263   agaggcaggttgggttctggaaatcggagtcaatggtggatca 305
             ||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 17285 agaggcaagttggattttggaattcagagtcaatggtggatca 17243
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
              complete sequence
          Length = 156772

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 309    agggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatc 367
              |||||||||| |||||||||||||||||||||| |||||||| || |  ||||||||||
Sbjct: 134425 agggagcaagtcagtttttgcttctccacttgaaaagatccaacccaatggagcaaatc 134367



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 151    gcacccatggtgatagcttccggagtgattgacaggggacacctgtc 197
              ||||| |||||||||||||| ||||  ||||||||| | ||||||||
Sbjct: 135316 gcacctatggtgatagcttctggagccattgacaggaggcacctgtc 135270



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 263    agaggcaggttgggttctggaaatcggagtcaatggtggatca 305
              ||||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 135097 agaggcaagttggattttggaattcagagtcaatggtggatca 135055
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>gb|AY579885.1| Sorghum bicolor AML1 mRNA, complete cds
          Length = 3140

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 111/137 (81%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                       
Query: 253 gtccccacagagaggcaggttgggttctggaaatcg---gagtcaatggtggatcagaga 309
           |||||||| |||||||| ||||| |||||||||||    | |||||||||  |||| | |
Sbjct: 495 gtccccactgagaggcaagttggattctggaaatcatcagggtcaatggtccatcacaaa 554

                                                                       
Query: 310 gggagcaagccagtttttgcttctccacttgagaagatccatccgacgggagcaaatcct 369
           |||||| ||||  ||||  ||||||||||||| ||| ||||||||| |||  ||| ||||
Sbjct: 555 gggagcgagcctattttcacttctccacttgataaggtccatccgatgggctcaagtcct 614

                            
Query: 370 gaaggcagtctggaaca 386
           | |||  ||||||||||
Sbjct: 615 gcaggtggtctggaaca 631



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 151 gcacccatggtgatagcttccggagtgattgacaggggacacctgtcctcgtt 203
           ||||| ||||||||||| |||||||   |||||||| | ||||||||| ||||
Sbjct: 393 gcacctatggtgatagcatccggagccgttgacaggagccacctgtccccgtt 445
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>gb|AY579890.1| Hordeum vulgare AML6 gene, partial cds
          Length = 480

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 411 cctagatgcccttcgcgtcagtaaggcgatggggcagggaa 451
           |||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 2   cctagatgnccttcgcgtcagtaaagcgatggggcaaggaa 42
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>ref|NM_179270.1| Arabidopsis thaliana DNA binding AT1G06230 transcript variant
            AT1G06230.2 mRNA, complete cds
          Length = 3141

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 324  ttttgcttctccacttgagaag 345
            ||||||||||||||||||||||
Sbjct: 2573 ttttgcttctccacttgagaag 2552
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>ref|NM_100505.2| Arabidopsis thaliana DNA binding AT1G06230 transcript variant
            AT1G06230.1 mRNA, complete cds
          Length = 3194

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 324  ttttgcttctccacttgagaag 345
            ||||||||||||||||||||||
Sbjct: 2626 ttttgcttctccacttgagaag 2605
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>emb|BX816821.1|CNS0AEK3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH6ZE12 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2748

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 324  ttttgcttctccacttgagaag 345
            ||||||||||||||||||||||
Sbjct: 2298 ttttgcttctccacttgagaag 2277
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>gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 48872

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 324   ttttgcttctccacttgagaag 345
             ||||||||||||||||||||||
Sbjct: 35014 ttttgcttctccacttgagaag 34993
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 320   cagtttttgcttctccacttgagaa 344
             |||||||||||||||||| ||||||
Sbjct: 75935 cagtttttgcttctccacctgagaa 75959
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 327     tgcttctccacttgagaagat 347
               |||||||||||||||||||||
Sbjct: 3064002 tgcttctccacttgagaagat 3064022
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>ref|XM_514528.1| PREDICTED: Pan troglodytes sorting nexin 5 (LOC458110), mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  ggaaatcggagtcaatggtg 300
            ||||||||||||||||||||
Sbjct: 1837 ggaaatcggagtcaatggtg 1818
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     gtcgtcgtcgatcttctccg 244
               ||||||||||||||||||||
Sbjct: 3454115 gtcgtcgtcgatcttctccg 3454134
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>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence
          Length = 214085

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gggctgaggaggtgaaagaa 137
             ||||||||||||||||||||
Sbjct: 61096 gggctgaggaggtgaaagaa 61077
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>emb|BX323043.5| Human DNA sequence from clone CTD-2510L9 on chromosome 1, complete
             sequence
          Length = 41309

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   tggatcagagagggagcaag 318
             ||||||||||||||||||||
Sbjct: 28348 tggatcagagagggagcaag 28367
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 212     caccgccagactcgtcgtcgtcga 235
               ||||||| ||||||||||||||||
Sbjct: 1293408 caccgccggactcgtcgtcgtcga 1293431
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>gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, complete sequence
          Length = 195110

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   aagaggcaacgaaagcaccc 156
             ||||||||||||||||||||
Sbjct: 61054 aagaggcaacgaaagcaccc 61035
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>gb|AC007920.18| Homo sapiens 3 BAC RP11-208N14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173534

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   agttgaggggctgaggaggt 130
             ||||||||||||||||||||
Sbjct: 42382 agttgaggggctgaggaggt 42363
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>gb|AC079015.8| Homo sapiens chromosome 8, clone RP11-489O18, complete sequence
          Length = 157122

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcaggttgggttctgga 283
             ||||||||||||||||||||
Sbjct: 42319 gaggcaggttgggttctgga 42338
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>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207228

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tgtagagagggagagaaagc 24
             ||||||||||||||||||||
Sbjct: 13107 tgtagagagggagagaaagc 13126
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>gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 135177

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tgtagagagggagagaaagc 24
             ||||||||||||||||||||
Sbjct: 89716 tgtagagagggagagaaagc 89735
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>gb|AC084425.1|CBRG01B5 Caenorhabditis briggsae cosmid G01B5, complete sequence
          Length = 42310

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   gaggaggtgaaagaaagagg 142
             ||||||||||||||||||||
Sbjct: 25887 gaggaggtgaaagaaagagg 25868
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>gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, complete sequence
          Length = 152530

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    aagaggcaacgaaagcaccc 156
              ||||||||||||||||||||
Sbjct: 130335 aagaggcaacgaaagcaccc 130316
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 211     ccaccgccaga-ctcgtcgtcgtcgatc 237
               ||||||||||| ||||||||||||||||
Sbjct: 3386142 ccaccgccagaactcgtcgtcgtcgatc 3386169
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>emb|BX005055.5| Zebrafish DNA sequence from clone CH211-188N23 in linkage group 23,
             complete sequence
          Length = 156598

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     agagagggagagaaagcgtccttc 31
             |||||| |||||||||||||||||
Sbjct: 49916 agagagagagagaaagcgtccttc 49939
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 212     caccgccagactcgtcgtcgtcga 235
               ||||||| ||||||||||||||||
Sbjct: 1317186 caccgccggactcgtcgtcgtcga 1317209
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>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence
          Length = 190156

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    tccttcttcctcctccccgactcc 49
             |||||||||||||||||| |||||
Sbjct: 50500 tccttcttcctcctcccccactcc 50523
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>emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chromosome 2, complete
             sequence
          Length = 205358

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ttgaggggctgaggaggtga 132
             ||||||||||||||||||||
Sbjct: 19619 ttgaggggctgaggaggtga 19638
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>emb|AJ308491.1|ODI308491 Oikopleura dioica mRNA for Oikosin1 protein
          Length = 6996

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 gccagactcgtcgtcgtcga 235
           ||||||||||||||||||||
Sbjct: 403 gccagactcgtcgtcgtcga 384


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,332,731
Number of Sequences: 3902068
Number of extensions: 4332731
Number of successful extensions: 125028
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 124733
Number of HSP's gapped (non-prelim): 296
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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