ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGLS_TRIRP (P26204) Non-cyanogenic beta-glucosidase precursor (E... 31 1.7
2BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 31 1.7
3ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disinteg... 30 2.9
4DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila D... 30 3.8
5BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein 30 3.8
6FBN2_HUMAN (P35556) Fibrillin-2 precursor 29 4.9
7FBN2_MOUSE (Q61555) Fibrillin-2 precursor 29 4.9
8SMG_DROME (Q23972) Protein Smaug 29 6.4
9CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14) 29 6.4
10APS_RAT (Q9Z200) SH2 and PH domain-containing adapter protein AP... 28 8.4
11DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Del... 28 8.4

>BGLS_TRIRP (P26204) Non-cyanogenic beta-glucosidase precursor (EC 3.2.1.21)|
          Length = 493

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 405 VAHNRVAFHGNNIHIMRPKYHPWHKGK 325
           V HN++  H   +H+ + KY  + KGK
Sbjct: 241 VTHNQILAHAEAVHVYKTKYQAYQKGK 267



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>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 228  SCCGGECLGSQVLQCCCSYTGEDEGARPCLFASCPC 335
            +C  G+   SQ  QC C  TG+  GA+     +C C
Sbjct: 1352 NCPAGQTWNSQTCQCSCPATGKCTGAQVWCSKACKC 1387



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>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 9) (ADAM-TS
            9) (ADAM-TS9)
          Length = 1935

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +3

Query: 252  GSQVLQCCCSYTGEDEGARPCLFASCPCATGGTWDA*CVYCYHG---RRPGCEL 404
            GS +    C +  +  G R C    CP    G W    V C  G   R  GC++
Sbjct: 1473 GSHLESDYCKHLAKPHGHRKCRGGRCPKWKAGAWSQCSVSCGRGVQQRHVGCQI 1526



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>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = +3

Query: 237 GGECL---GSQVLQCCCSYTGED--EGARPCLFASCPCATGG 347
           GG C+   GS+   C   + G D  E A PC  AS PCA GG
Sbjct: 401 GGTCVEGGGSRRCSCALGFGGRDCRERADPC--ASRPCAHGG 440



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>BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein|
          Length = 387

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 370 YTHHASQVPPVAQGQEANRQGRAPSSSPVYEQQHCRTWEPKHSPPQQLG 224
           + HH+ Q PP A     + Q       P+  QQ      P   PPQQLG
Sbjct: 87  HLHHSQQPPPPAAAPTQSLQPLPQQQQPLPPQQ------PPPPPPQQLG 129



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>FBN2_HUMAN (P35556) Fibrillin-2 precursor|
          Length = 2911

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 270  CCCSYTGEDEGARPCLFASCPCATGGTWD 356
            CCC+Y     G +PC     PC T GT D
Sbjct: 1761 CCCTYNVGKAGNKPCE----PCPTPGTAD 1785



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>FBN2_MOUSE (Q61555) Fibrillin-2 precursor|
          Length = 2907

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 270  CCCSYTGEDEGARPCLFASCPCATGGTWD 356
            CCC+Y     G +PC     PC T GT D
Sbjct: 1755 CCCTYNVGKAGNKPCE----PCPTPGTAD 1779



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>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 364 HHASQVPPVAQGQEANRQGRAPSSSPVYEQQHCRTW--EPKHSPP 236
           HH+ Q PP     + N  G  PS  P Y+     ++   P+  PP
Sbjct: 831 HHSQQAPPPLPQFDYNGYGGGPSHQPQYKSSSYPSFMGNPQQQPP 875



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>CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14)|
          Length = 617

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 446 KSAAVLGNPSTPPV*LTTGSPSMVTIYTSCVPSTTRGTRARSKQARPSPFIFTG 285
           K   V   P+T    +TTG P M +  T+   +TT  TRA +     +  + +G
Sbjct: 430 KKGGVTTAPTTVATTVTTGRPPMTSAVTTTTAATTTTTRAATTTTASNTNVCSG 483



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>APS_RAT (Q9Z200) SH2 and PH domain-containing adapter protein APS (Adapter|
           protein with pleckstrin homology and Src homology 2
           domains)
          Length = 621

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 228 SCCGGECLGSQVLQCCCSYTGEDEGARP 311
           SC  G CL S+V  C C    E +  RP
Sbjct: 310 SCARGGCLASRVTSCSCELLTEADMPRP 337



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>DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 589

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = +3

Query: 237 GGECL---GSQVLQCCCSYTGED--EGARPCLFASCPCATGG 347
           GG C+   G++   C   + G D  E A PC  AS PCA GG
Sbjct: 405 GGTCVEGGGARRCSCALGFGGRDCRERADPC--ASRPCAHGG 444


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,813,903
Number of Sequences: 219361
Number of extensions: 801734
Number of successful extensions: 2831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2827
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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