ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr... 28 7.9
2NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr... 28 7.9
3CCNB2_HUMAN (O95067) G2/mitotic-specific cyclin-B2 28 7.9

>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 9/36 (25%)
 Frame = +1

Query: 76   ISPTAAPI-WSRLAAPVGPGPS--------PDLVSP 156
            ++P A P+ W+RL  P  PGPS        P L++P
Sbjct: 2163 LNPVAVPLDWARLPPPAPPGPSFLLPLAPGPQLLNP 2198



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>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 9/36 (25%)
 Frame = +1

Query: 76   ISPTAAPI-WSRLAAPVGPGPS--------PDLVSP 156
            ++P A P+ W+RL  P  PGPS        P L++P
Sbjct: 2163 LNPVAVPLDWARLPPPAPPGPSFLLPLAPGPQLLNP 2198



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>CCNB2_HUMAN (O95067) G2/mitotic-specific cyclin-B2|
          Length = 398

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +1

Query: 70  RQISPTAA--PIWSRLAAPVGPGPSPDLVS 153
           +Q+ PTA+  P+     AP GP P+P+ VS
Sbjct: 70  KQLKPTASVKPVQMEKLAPKGPSPTPEDVS 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,558,006
Number of Sequences: 219361
Number of extensions: 357933
Number of successful extensions: 1432
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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