>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 49     ccgcccgccgccagccgccagc 70
              ||||||||||||||||||||||
Sbjct: 943204 ccgcccgccgccagccgccagc 943225

>gb|AC148662.1| Macaca mulatta Major Histocompatibility Complex BAC MMU009PO6, complete
             sequence
          Length = 191271

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 49    ccgcccgccgccagccgccagc 70
             ||||||||||||||||||||||
Sbjct: 45185 ccgcccgccgccagccgccagc 45206

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 79      tcgccgaccgccgccccgatctggt 103
               ||||||||||||||||||| |||||
Sbjct: 1946971 tcgccgaccgccgccccgacctggt 1946995

>gb|AC186560.1| Gasterosteus aculeatus clone VMRC26-98C14, complete sequence
          Length = 92037

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   ggggggcggcggaagaggaga 190
             |||||||||||||||||||||
Sbjct: 18975 ggggggcggcggaagaggaga 18995

>gb|AC099669.2| Homo sapiens chromosome 3 clone RP11-944L7, complete sequence
          Length = 217035

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ccgcccgccgccagccgccagcggc 73
             |||||||||||| ||||||||||||
Sbjct: 67444 ccgcccgccgcccgccgccagcggc 67420

>gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87C-87C, BAC clone
             BACR02G11, complete sequence
          Length = 167239

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    gatccgcccgccgccagccgc 66
             |||||||||||||||||||||
Sbjct: 87826 gatccgcccgccgccagccgc 87846

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 39       cccctccgatccgcccgccgc 59
                |||||||||||||||||||||
Sbjct: 23553584 cccctccgatccgcccgccgc 23553564

>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    cccctccgatccgcccgccgc 59
             |||||||||||||||||||||
Sbjct: 16283 cccctccgatccgcccgccgc 16263

>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025A05
          Length = 154298

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     cccctccgatccgcccgccgc 59
              |||||||||||||||||||||
Sbjct: 116889 cccctccgatccgcccgccgc 116869

>gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34 of 118 of the complete
              sequence
          Length = 265467

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     gatccgcccgccgccagccgc 66
              |||||||||||||||||||||
Sbjct: 123426 gatccgcccgccgccagccgc 123446

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 57      cgccagccgccagcggcagat 77
               |||||||||||||||||||||
Sbjct: 1007105 cgccagccgccagcggcagat 1007125

>gb|AC174720.1| Gasterosteus aculeatus clone VMRC26-98K03, complete sequence
          Length = 92037

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   ggggggcggcggaagaggaga 190
             |||||||||||||||||||||
Sbjct: 18975 ggggggcggcggaagaggaga 18995

>ref|XM_493945.1| Oryza sativa (japonica cultivar-group), Ozsa8010 predicted mRNA
          Length = 3072

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   cgcccgccgccagccgccag 69
            ||||||||||||||||||||
Sbjct: 1271 cgcccgccgccagccgccag 1290

>ref|XM_482688.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 468

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  tctcgccgaccgccgccccg 96
           ||||||||||||||||||||
Sbjct: 370 tctcgccgaccgccgccccg 351

>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAa0068G15, complete sequence
          Length = 130161

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    ccgcccgccgccagccgcca 68
             ||||||||||||||||||||
Sbjct: 31755 ccgcccgccgccagccgcca 31736

>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   tggaggtaggggggcggcgg 181
             ||||||||||||||||||||
Sbjct: 27868 tggaggtaggggggcggcgg 27887

>ref|XM_455755.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F15015g predicted mRNA
          Length = 804

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 gattccggaggaggatggtc 213
           ||||||||||||||||||||
Sbjct: 552 gattccggaggaggatggtc 533

>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15,
              complete sequence
          Length = 146175

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     ccgcccgccgccagccgcca 68
              ||||||||||||||||||||
Sbjct: 117929 ccgcccgccgccagccgcca 117910

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ccgccagccgccagcggcag 75
              ||||||||||||||||||||
Sbjct: 974601 ccgccagccgccagcggcag 974582

>gb|AC127260.3| Mus musculus BAC clone RP24-315I3 from chromosome 3, complete sequence
          Length = 177195

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     ttcaaatctatcccctttcc 30
              ||||||||||||||||||||
Sbjct: 142306 ttcaaatctatcccctttcc 142325

>gb|AC125037.4| Mus musculus BAC clone RP23-332H20 from chromosome 3, complete sequence
          Length = 207842

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     ttcaaatctatcccctttcc 30
              ||||||||||||||||||||
Sbjct: 129173 ttcaaatctatcccctttcc 129154

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     gattccggaggaggatggtc 213
               ||||||||||||||||||||
Sbjct: 1390476 gattccggaggaggatggtc 1390457

>tpg|BK000747.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M166, complete sequence
          Length = 1122

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 44  ccgatccgcccgccgccagccgccagcg 71
           |||| |||||||||||| ||||||||||
Sbjct: 613 ccgagccgcccgccgcccgccgccagcg 586

>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 44    ccgatccgcccgccgccagccgccagcg 71
             |||| |||||||||||| ||||||||||
Sbjct: 70256 ccgagccgcccgccgcccgccgccagcg 70229

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 34      ccacccccctccgatccgcccgccgcca 61
               ||||| |||| |||||||||||||||||
Sbjct: 3384268 ccacctcccttcgatccgcccgccgcca 3384241

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 44      ccgatccgcccgccgccagccgccagcg 71
               |||| |||||||||||| ||||||||||
Sbjct: 6473974 ccgagccgcccgccgcccgccgccagcg 6474001



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      ccgcccgccgccagccgcca 68
               ||||||||||||||||||||
Sbjct: 1900099 ccgcccgccgccagccgcca 1900080

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 77       tctcgccgaccgccgccccg 96
                ||||||||||||||||||||
Sbjct: 21909892 tctcgccgaccgccgccccg 21909873

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 50      cgcccgccgccagccgccag 69
               ||||||||||||||||||||
Sbjct: 3558443 cgcccgccgccagccgccag 3558462

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      tggaggtaggggggcggcgg 181
                ||||||||||||||||||||
Sbjct: 27797451 tggaggtaggggggcggcgg 27797470

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 78      ctcgccgaccgccgccccgatctg 101
               |||||||||||||||| |||||||
Sbjct: 2045101 ctcgccgaccgccgcctcgatctg 2045124

>gb|AE004513.1| Pseudomonas aeruginosa PAO1, section 74 of 529 of the complete genome
          Length = 15470

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   ccagccgccagcggcagatc 78
            ||||||||||||||||||||
Sbjct: 2398 ccagccgccagcggcagatc 2379

>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0675A05
          Length = 131972

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    cgcccgccgccagccgccag 69
             ||||||||||||||||||||
Sbjct: 50280 cgcccgccgccagccgccag 50299

>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0409A07
          Length = 146663

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tctcgccgaccgccgccccg 96
              ||||||||||||||||||||
Sbjct: 110561 tctcgccgaccgccgccccg 110542

>dbj|AK109875.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B12, full
            insert sequence
          Length = 1765

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   cgcccgccgccagccgccag 69
            ||||||||||||||||||||
Sbjct: 1294 cgcccgccgccagccgccag 1313

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 44      ccgatccgcccgccgccagccgccagcg 71
               |||| |||||||||||| ||||||||||
Sbjct: 6540441 ccgagccgcccgccgcccgccgccagcg 6540468



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      ccgcccgccgccagccgcca 68
               ||||||||||||||||||||
Sbjct: 1897820 ccgcccgccgccagccgcca 1897801

>emb|AL365476.1|LMFLUNK02 Leishmania major Friedlin cosmid clones L8382, incomplete shotgun,
            assembled reads, with VERY preliminary annotation,
            complete sequence
          Length = 28334

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  tcaatgttggatgaggacga 253
            ||||||||||||||||||||
Sbjct: 9935 tcaatgttggatgaggacga 9954


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,144,262
Number of Sequences: 3902068
Number of extensions: 2144262
Number of successful extensions: 45892
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44917
Number of HSP's gapped (non-prelim): 970
length of query: 280
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 258
effective length of database: 17,147,199,772
effective search space: 4423977541176
effective search space used: 4423977541176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)