Clone Name | bastl54d04 |
---|---|
Clone Library Name | barley_pub |
>CH10_PARDE (Q9Z463) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 95 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/49 (40%), Positives = 25/49 (51%) Frame = -2 Query: 160 VPDSWP*PQPAQGQ*DSFGAGATPPCGERSAAREVAGDRDEAGEWRDAE 14 +PDS +PA+G+ S G GA GE A AGDR G+W E Sbjct: 27 IPDSAK-EKPAEGEITSVGEGARKDSGELIAPAVKAGDRVLFGKWSGTE 74
>CH10_RHOCA (P95677) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 95 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 136 QPAQGQ*DSFGAGATPPCGERSAAREVAGDRDEAGEWRDAE 14 +PA+G+ + GAGA GE A GDR G+W E Sbjct: 34 KPAEGEVVAVGAGARKDSGELIAPAVAVGDRILFGKWSGTE 74
>CH101_RHOSH (P25969) 10 kDa chaperonin 1 (Protein Cpn10 1) (groES protein 1)| Length = 94 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -2 Query: 136 QPAQGQ*DSFGAGATPPCGERSAAREVAGDRDEAGEWRDAE 14 +PA+G+ S G GA GE A AGDR G+W E Sbjct: 33 KPAEGEVVSCGEGARKDSGELIAMSVKAGDRVLFGKWSGTE 73
>CH10_RHOPA (Q93MH2) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 95 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 136 QPAQGQ*DSFGAGATPPCGERSAAREVAGDRDEAGEWRDAE 14 +PA+G+ + G GA GE A AGDR G+W E Sbjct: 34 KPAEGEVVACGEGARKDSGELIAMSVKAGDRVLFGKWSGTE 74
>PGK_HELPY (P56154) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 402 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Frame = +1 Query: 166 QTIKSSSDRIVIAVED--VSDLWLNVKDS--FKQRLPVKKACLNNKARNPVLVENL 321 Q ++ S R++I V+ D LN+ D ++ LP + C++NKA++ +LV +L Sbjct: 15 QEVEVSHKRVLIRVDFNVPLDENLNITDDTRIRESLPTIQYCIDNKAKDIILVSHL 70
>LEU1_RHIME (Q9X7L2) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 558 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 94 TPPCGERSAAREVAGDRDEAGEWRDAEGRG 5 T P GE R VA + + GE R EG+G Sbjct: 449 TYPAGEHKGLRVVAAEITDGGETRQIEGKG 478
>ACDB_ARCFU (O29868) Acetyl-CoA decarbonylase/synthase complex beta subunit (EC| 2.3.1.-) (ACDS complex beta subunit) (ACDS complex acyltransferase) Length = 523 Score = 28.5 bits (62), Expect = 8.4 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = +1 Query: 220 DLWLNV-----KDSFKQRLPVKKACLNNKARNPVLVENLPAEFIQTTDSRLRSRFPQEQY 384 D+W+ + K K + + KA + +E + A +I TD L + E Sbjct: 129 DIWIRIGKNAIKKGLKSLIQIAKATMMLYKNELPFIEKIEAVYI--TDKDLVEKLLNELA 186 Query: 385 LF*FREPYATVVLVTCEDLDEF 450 + F E A V ++ ED+DEF Sbjct: 187 MPIFEERDARVEALSDEDVDEF 208 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,531,570 Number of Sequences: 219361 Number of extensions: 858776 Number of successful extensions: 2647 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2570 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2647 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)