>ZN524_HUMAN (Q96C55) Zinc finger protein 524|
          Length = 264

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 22/53 (41%), Positives = 27/53 (50%)
 Frame = +2

Query: 236 SPPNPRGREARLPRLRPSSVSARATRALNPTTRALPADSGDEPTMESVEIVQA 394
           SPP PRGR  R P    ++ S R  +A  P  R  P  SG EP +  V+ V A
Sbjct: 24  SPPVPRGRRGRRP--GGATSSNRTLKASLPRKRGRPPKSGQEPPLVQVQGVTA 74

>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein; Gene UL80 protein;
           Gene UL80.5 protein; C-terminal peptide]
          Length = 708

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
 Frame = +2

Query: 146 SCAVRPGSAPRAIDLHSASASPALARTVLQSPPNP---RGREARLPRL--RPSSVSARAT 310
           +C ++  SA R+ D  S +A+PA    V  S P+P        + P L   PS + A + 
Sbjct: 263 ACDIKAASAERSGDSRSQAATPAAGARVPSSSPSPPVEPPSPVQPPALPASPSVLPAESP 322

Query: 311 RALNPTTRALPADSGDEPTMESVEIVQAQPFAAINSALP 427
            +L+P+  A  A S   P   +V    A P A +  A P
Sbjct: 323 PSLSPSEPA-EAASMSHPLSAAVPAATAPPGATVAGASP 360

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +2

Query: 161 PGSAPRAIDLHSASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTRAL 340
           P SA R     SAS SP  A    Q PP+P    +      PS+  + A +A +PT    
Sbjct: 733 PRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRS------PSANWSPAKKAKSPTQSPS 786

Query: 341 PADSGDE 361
           PA + D+
Sbjct: 787 PARNSDQ 793

>COPC_XANCJ (Q56797) Copper resistance protein C precursor|
          Length = 127

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +2

Query: 287 SSVSARATRALNPTTRALPADSGDEPTMESVEIVQAQPFAAINSALPCDEGR--LGTPDR 460
           ++VSA AT  L+ T + LP+ SG E TM  +  ++  P      A P  +G+  + TPD+
Sbjct: 38  ATVSAPATINLSFTEKLLPSLSGAELTMTKMPGMEMPPMKVAAKAAPSADGKSLIVTPDK 97

>LPRE_MYCLE (Q9CC94) Putative lipoprotein lprE precursor|
          Length = 202

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
 Frame = +2

Query: 161 PGSAPRAIDLHSASASPALARTVLQSPPNPRGREARLPR---------LRPSSVSARA-T 310
           P   P A++L    ASP +AR V + P +PR  +   P           + S+V  +A T
Sbjct: 73  PPDDPCAVNL----ASPTIARVVSELPRDPRSAQPWNPEPLAGNYNECAQLSAVIIKANT 128

Query: 311 RALNPTTRAL 340
            A+NPTTRA+
Sbjct: 129 NAVNPTTRAV 138

>SALM_DROVI (P39806) Homeotic protein spalt-major|
          Length = 1402

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
 Frame = +2

Query: 140  NLSCAVRPGSA---PRAIDLHSASASPALARTVLQSPPNPRGREARLPRLRPSSVSARAT 310
            N++   RP SA   P +I   SASASP+ A T   S P P     R       SVS  + 
Sbjct: 1058 NINSHQRPHSAASNPNSIG--SASASPS-APTSPSSQPKPSCSPVRSSCSPVRSVSETSQ 1114

Query: 311  RALNPTTRALP---ADSGDEPTMESVEIVQAQPFAAINSALPC 430
             AL+ T RALP   A S        +  V+ +P A   S+  C
Sbjct: 1115 GALDLTPRALPPPLASSSSRSPYRQLLSVRRRPLARSVSSHRC 1157

>VL96_IRV1 (P22856) L96 protein|
          Length = 867

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
 Frame = +2

Query: 146 SCAVRPGSAPRAIDLHSASASP-ALARTVLQSPPNPRGREARLPRLRPSSVSAR------ 304
           S +VRP S   ++   S SA P + + +V    P+ R +    P +RP S S R      
Sbjct: 487 SPSVRPRSKSPSVRPKSPSARPRSKSPSVRSKSPSVRPKS---PSVRPKSPSVRPRSKSP 543

Query: 305 ATRALNPTTRALPADSGDEPTMESVEIVQAQPFAAINSALPCDEGRLGTPDRD 463
           + R  +P+ R  P D  + P++     V       I       E + G  DRD
Sbjct: 544 SVRPKSPSVRPPPPDPSNSPSITVDPSVTPPSSVKIKKRPELPEYKGGNADRD 596

>SFRS8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Suppressor of white|
            apricot protein homolog)
          Length = 951

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 152  AVRPGSAPRAIDLHSASASPALARTVLQSPPNPRG----REARLPRLRPSSVSARATRAL 319
            A RP +AP A   HSAS SP  +R    S    RG    +EA++     SSV ++ T+ L
Sbjct: 876  APRP-AAPAAHSAHSASVSPVESRG--SSQERSRGVSQEKEAQISSAIVSSVQSKITQDL 932

Query: 320  NPTTRALPADSGDEPTMES 376
                RA+ A S +  T  S
Sbjct: 933  MAKVRAMLAASKNLQTSAS 951

>PRM2_RAT (P11248) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 104

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +1

Query: 334 RSSCRLRRRANHGIRRDRPSSAVRCDKLR 420
           R SCR RRR   G RR R   + RC K R
Sbjct: 72  RHSCRHRRRHRRGCRRSRRRRSCRCRKCR 100

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 167 SAPRAIDLHSASASPALARTVLQSPPNPRGREARLP--RLRPSSVSARATR 313
           S P  ++ H+  + PAL   + Q P  P  R A LP    RP +VS   T+
Sbjct: 846 STPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQ 896

>KCT2_MOUSE (Q8K201) Keratinocytes-associated transmembrane protein 2 precursor|
          Length = 259

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +2

Query: 278 LRPSSVSARATRALNPTTRALP------ADSGDEPTMESVEIVQAQPFAAINSALPCDEG 439
           L P+S     + +  PT  A P      ADS ++P+ME  +++      A       D G
Sbjct: 81  LSPASAEKSGSSSAAPTPTAAPSAPEEEADSNEDPSMEEEDLLALNSSPATGKD-TLDNG 139

Query: 440 RLGTPDRDTT 469
             G PD D T
Sbjct: 140 DYGEPDYDWT 149

>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1139

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = +2

Query: 167 SAPRAIDLH-SASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTRALP 343
           ++P+A+ L    S +P  A  VLQ  P P+ +     +L+  +V    T +  P TR + 
Sbjct: 105 ASPQALALQVKVSPTPPRATPVLQPRPQPQPQPQPSAQLQQQTVMITPTFSTAPQTRIIQ 164

Query: 344 ADSGDEPTMESVEIVQAQPFAAINSA 421
                +    S +++QAQ  + + S+
Sbjct: 165 QPLIYQNAATSFQVLQAQVQSLVTSS 190

>TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-)|
           (Polyserase-1) (Polyserine protease 1) (Polyserase-I)
           [Contains: Serase-1; Serase-2; Serase-3]
          Length = 1061

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 227 VLQSPPNPRGREARLPRLRPSSVSARATRALNPTTRALPADSGDEPTME 373
           +  S P P   E+R+P        A     L+P+T A P + G  P M+
Sbjct: 453 ITPSTPWPTSPESRVPNTTAKPTVAPTPAPLHPSTAAKPQECGARPAMD 501

>YM44_CAEEL (P34520) Hypothetical protein K11H3.4|
          Length = 717

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +2

Query: 179 AIDLHSASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTRALPADSGD 358
           A+D  + S  P  ++ +LQ PP P+ R          ++ +   + L    R+LP   GD
Sbjct: 531 AVDSRNQSVPPVFSK-LLQEPPPPKKRNDEYVLRSKGNIRSSDEKRLTVGKRSLPFYYGD 589

Query: 359 EPTME-SVEIVQAQPFAAI 412
           E   + S++ + A  FA+I
Sbjct: 590 EDKKKTSLKKIIALEFASI 608

>Y228_TREPA (O83256) Hypothetical protein TP0228|
          Length = 271

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 308 TRALN---PTTRALPADSGDEPTMESVEIVQAQPFAAINSALP 427
           TR+L+    TTRALPA SG+EPT   +  V+      I  A P
Sbjct: 15  TRSLHLSIDTTRALPAHSGNEPTRTHLAAVRVSLLKTIPVAPP 57

>PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:|
           PP2-A; PP2-C; PP2-D; PP2-B (Protamine MP2)]
          Length = 107

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = +1

Query: 334 RSSCRLRRRANHGIRRDRPSSAVRCDKLR 420
           R SCR RRR   G RR R     RC K R
Sbjct: 75  RHSCRHRRRHRRGCRRSRRRRRCRCRKCR 103

>HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fragment)|
          Length = 152

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 236 SPPNPRGREARLPRLRPSSVSARATRA 316
           SPP PRGR  + P   P S  A+AT A
Sbjct: 80  SPPRPRGRPPKDPNAPPKSPKAKATPA 106

>NCA12_XENLA (P36335) Neural cell adhesion molecule 1-B precursor|
          Length = 1092

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
 Frame = +2

Query: 146  SCAVRPGSAPRAIDLHSASASPALAR--TVLQSPPNPRGREARL------PRLRPSSVSA 301
            S A  P +AP +  + S  A+P+ A   T    PP    + A L      P   PS   A
Sbjct: 850  STAPPPSTAPDSNTVQSVQATPSKAEVPTASSPPPTSSPKVAPLVDLSDTPTNNPSKAVA 909

Query: 302  RATRALNPTTRALPADSGDEPTMESVEIVQAQP 400
                ALNP+     A S  EP    ++ V   P
Sbjct: 910  NQAGALNPSA----ATSAAEPPTAIIKPVTTVP 938

>ZN692_HUMAN (Q9BU19) Zinc finger protein 692|
          Length = 519

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
 Frame = +2

Query: 143 LSCAVRPGSAPRA-IDLHSASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRAL 319
           ++C  + G  P A   L S  A PAL+ + L S   P       P+L  +  +A+ T AL
Sbjct: 233 VTCTPKEGETPPAPAALSSPLAVPALSASSLSSRAPPPAEVRVQPQLSRTPQAAQQTEAL 292

Query: 320 NPT---TRALPADSGDEPTMESVEIVQAQPFAAINSALPCD 433
             T    ++ P  + DE T +     +    AA    +PCD
Sbjct: 293 ASTGSQAQSAPTPAWDEDTAQIGP--KRIRKAAKRELMPCD 331

>PDE4A_MOUSE (O89084) cAMP-dependent 3',5'-cyclic phosphodiesterase 4A (EC|
           3.1.4.17)
          Length = 844

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
 Frame = +2

Query: 155 VRPGSAPRAIDLHSASASPALARTVLQSPPNPRGREARLP-RLRPSSVSARATRA----- 316
           + P +AP    L  +   P   +  L+ PP    R+ R P R++    S  A R+     
Sbjct: 1   MEPPAAPSERSLSLSLPGPREGQATLKPPPQHLWRQPRTPIRIQQRGYSDSAERSEPERS 60

Query: 317 -LNPTTRALPADSGDEPTMESVEI 385
              P  RA   D+GD P + +  +
Sbjct: 61  PHRPIERADAVDTGDRPGLRTTRM 84

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 167 SAPRAIDLHSASASPALARTVLQSPPNPRGREARLP--RLRPSSVS 298
           S P  ++ H+  + PAL   + Q P  P  R A LP    RP +VS
Sbjct: 848 STPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPTRPPAVS 893

>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)|
          Length = 176

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 236 SPPNPRGREARLPRLRPSSVSARAT 310
           SPP PRGR  + P   P S  A+AT
Sbjct: 104 SPPRPRGRPPKDPNAPPKSPKAKAT 128

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +2

Query: 137 HNLSCAVRPGSAPRAIDLHSASAS-PALARTV----LQSPPNPRGREARLPRLRPSSVSA 301
           H    A  PGSAPR     SA+AS PA  R      +++PP   G  A  P   P++  A
Sbjct: 373 HRPPAAPMPGSAPRPGPPASAAASGPARPRAAVAPCVRAPPPGPGPRAPAPGAEPAARPA 432

Query: 302 RATR 313
            A R
Sbjct: 433 DARR 436

>FTSKL_DEIRA (Q9RXB5) Hypothetical ftsK-like protein DR0400|
          Length = 980

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
 Frame = +2

Query: 158 RPGSAPRAIDLHSA-------SASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRA 316
           RP  +P   D  +        SA+P  +RT  +  P+P  R AR+   R      R T  
Sbjct: 307 RPAPSPPVYDAAAVPALDIDFSAAPRRSRTPAEQMPDPFARAARVRSAR------RTTTP 360

Query: 317 LNPTTRALPADSGDEPTMESVEIVQAQPFAAINSALP 427
           L P  + L  D+ + P          +P  A N A P
Sbjct: 361 LVPVPQQL--DAAEMPAPRPARTPPGRPATAGNVAPP 395

>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix|
            phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument
            protein UL32)
          Length = 1048

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 32/137 (23%)
 Frame = +2

Query: 155  VRPGSAPRAIDLHSASASPALARTVLQSPPNPRGREARLPRLRP---------------- 286
            V P ++P ++    +SASP+ A++   SP   RG    +P L+P                
Sbjct: 864  VSPATSPLSM---LSSASPSPAKSAPPSPVKGRGSRVGVPSLKPTLGGKAVVGRPPSVPV 920

Query: 287  ----------SSVSARATRALNPTTRALPADS------GDEPTMESVEIVQAQPFAAINS 418
                      SS +A  T      T   P  S       + P + S  I++    AA+ S
Sbjct: 921  SGSAPGRLSGSSRAASTTPTYPAVTTVYPPSSTAKSSVSNAPPVASPSILKPGASAALQS 980

Query: 419  ALPCDEGRLGTPDRDTT 469
                    +G+P + TT
Sbjct: 981  RRSTGTAAVGSPVKSTT 997

>MANS1_HUMAN (Q9H8J5) MANSC domain containing protein 1 precursor|
          Length = 431

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
 Frame = +2

Query: 176 RAIDLHSASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTRALPADSG 355
           RA     A A+ A+  T  Q+P + +G    +P    S+++       NPT  AL   + 
Sbjct: 289 RAAATLQAMATTAVLTTTFQAPTDSKGSLETIPFTEISNLTLNTGNVYNPT--ALSMSNV 346

Query: 356 DEPTME---SVEIVQAQPFAAINSALPCDEGRLGTP 454
           +  TM    S E  +A P ++   ++P  E + G P
Sbjct: 347 ESSTMNKTASWEGREASPGSSSQGSVP--ENQYGLP 380

>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate|
           regulatory protein algR3)
          Length = 352

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 158 RPGSAPRAIDLHSASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTR 334
           +P + P A     A+A PA+     +    P  + A  P  +P++ +A A  A  PT +
Sbjct: 136 KPATKPAA----KAAAKPAVKTVAAKPAAKPAAKPAAKPAAKPAAKTAAAKPAAKPTAK 190

>IAA5_ORYSA (Q59AF3) Auxin-responsive protein IAA5 (Indoleacetic acid-induced|
           protein 5)
          Length = 271

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = +2

Query: 182 IDLHSASASPALARTVLQSPPNPRGREARLPRL 280
           I L +A+ASP  + +   S PNP G EAR PRL
Sbjct: 11  IGLSAAAASPTPSSSSCSSSPNP-GGEARGPRL 42

>LIPA3_MOUSE (P60469) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1043

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
 Frame = +2

Query: 194 SASASPALARTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTR-----------AL 340
           S S  P+L  + L SP  P    +  PRL P S +   T   N  ++           A+
Sbjct: 501 SCSLPPSLTTSTLASPSPPSSGHST-PRLAPPSPAREGTDKTNHVSKEEAGVPRGEGPAV 559

Query: 341 PADSGDEPTMESVEIVQAQPFAAINSALPCD----EGRLGTPD 457
           P D+   PT  S  + +     A+ +  P D     G   TPD
Sbjct: 560 PGDT-PPPTPRSARLERMAQALALQAGSPEDGAPPRGSESTPD 601

>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 667

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +2

Query: 221 RTVLQSPPNPRGREARLPRLRPSSVSARATRALNPTTR 334
           RT L  PP    REA  P L  S+ +A AT A  PT R
Sbjct: 278 RTSLALPPPLPPREAPPPSLPDSNSTALATSAQTPTVR 315

>PDE4A_RAT (P54748) cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC|
           3.1.4.17) (DPDE2)
          Length = 844

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
 Frame = +2

Query: 155 VRPGSAPRAIDLHSASASPALARTVLQSPPNPRGREARLP-----RLRPSSVSARATRAL 319
           + P +AP    L  +   P   +  L+ PP    R+ R P     R  P S     T   
Sbjct: 1   MEPPAAPSERSLSLSLPGPREGQATLKPPPQHLWRQPRTPIRIQQRGYPDSAERSETERS 60

Query: 320 --NPTTRALPADSGDEPTMESVEI 385
              P  RA   D+GD P + +  +
Sbjct: 61  PHRPIERADAVDTGDRPGLRTTRM 84

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +2

Query: 200 SASPALARTVLQSPPNPRGREA---RLPRLRPSSVSARATRALNPTTRALPADSGDEPTM 370
           SA+PA +  + Q  P P    A    LP+ +P   +ARA   L P  + LP+ +   P  
Sbjct: 548 SAAPAPSPLLPQQQPTPSAAPAPSPLLPQQQPPPSAARAPSPLPPQQQPLPSATPAPPPA 607

Query: 371 ESV 379
           + +
Sbjct: 608 QQL 610

>NFRKB_HUMAN (Q6P4R8) Nuclear factor related to kappa-B-binding protein|
           (DNA-binding protein R kappa-B)
          Length = 1299

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 18/82 (21%)
 Frame = +2

Query: 188 LHSASASPALARTVLQSPPNPRGR------------------EARLPRLRPSSVSARATR 313
           +H A A+ A AR  LQ  P P  +                  E     L  SS+      
Sbjct: 662 IHQAQAAAAKARKALQQKPKPPSKVKSSSKESSIKVLSSGPSEQSQMSLSDSSMPPTPVT 721

Query: 314 ALNPTTRALPADSGDEPTMESV 379
            + PTT ALPA     P + +V
Sbjct: 722 PVTPTTPALPAIPISPPPVSAV 743

>YI23_BURCE (P24538) Insertion element IS402 hypothetical 9.6 kDa protein|
          Length = 87

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -1

Query: 342 GRARVVGFKALVALAETEDGRRRGRRASLPLGLGGDWRTVRASAGDADAEWRSMARGADP 163
           GRAR VGF  +  L +  +     R            R VR+ +G   A  R++AR +DP
Sbjct: 7   GRARSVGFGPVFGLPQRRESMMNRR------------RLVRSRSGPLRAALRAVARASDP 54

>NCA11_XENLA (P16170) Neural cell adhesion molecule 1-A precursor|
          Length = 1088

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
 Frame = +2

Query: 146  SCAVRPGSAPRAIDLHSASASP--ALARTVLQSPPNPRGREARL------PRLRPSSVSA 301
            S A  P +AP +  + S  A+P  A A T    PP    + A L      P   PS V A
Sbjct: 846  STAPPPTTAPDSNTIQSIQATPSKAEAPTTSSPPPTSSPKVAPLVDLSDTPTNNPSKVVA 905

Query: 302  RATRALNPTTRALPADSGDEPTMESVEIVQAQP 400
                 LNP+     A S  EP    ++ V   P
Sbjct: 906  NQAGPLNPSA----ATSAAEPPTVIIKPVTTVP 934


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,398,387
Number of Sequences: 219361
Number of extensions: 1065098
Number of successful extensions: 4078
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4072
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)