>gb|AC091899.2| Homo sapiens chromosome 5 clone RP11-158D20, complete sequence
          Length = 139253

 Score = 44.1 bits (22), Expect = 0.019
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 5     aggaagggagggagtatgctat 26
             ||||||||||||||||||||||
Sbjct: 76041 aggaagggagggagtatgctat 76020

>gb|AC091877.2| Homo sapiens chromosome 5 clone CTD-3061E14, complete sequence
          Length = 147536

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     tttaggaagggagggagta 20
             |||||||||||||||||||
Sbjct: 94840 tttaggaagggagggagta 94822

>gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chromosome unknown, complete
              sequence
          Length = 182992

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atttaggaagggagggagt 19
              |||||||||||||||||||
Sbjct: 147303 atttaggaagggagggagt 147285

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 1       atttaggaagggagggagtatgctatt 27
               ||||||||| |||||||||||| ||||
Sbjct: 9891775 atttaggaacggagggagtatgttatt 9891801

>gb|AF279874.3| Homo sapiens chromosome 8 clone CTD-2351C9 map q21-q23, complete
             sequence
          Length = 109808

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     ttaggaagggagggagtatgcta 25
             ||||||| |||||||||||||||
Sbjct: 41790 ttaggaaaggagggagtatgcta 41812

>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0017I18
          Length = 146304

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 1     atttaggaagggagggagtatgctatt 27
             ||||||||| |||||||||||| ||||
Sbjct: 47222 atttaggaacggagggagtatgttatt 47248

>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0095I04
          Length = 138924

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 1     atttaggaagggagggagtatgctatt 27
             ||||||||| |||||||||||| ||||
Sbjct: 74462 atttaggaacggagggagtatgttatt 74488

>gb|AC167331.3| Mus musculus chromosome 1, clone RP23-301L19, complete sequence
          Length = 197718

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      atttaggaagggagggag 18
              ||||||||||||||||||
Sbjct: 175404 atttaggaagggagggag 175387

>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 1     atttaggaagggagggagtatg 22
             ||||||||| ||||||||||||
Sbjct: 57363 atttaggaacggagggagtatg 57342

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 1     atttaggaagggagggagtatg 22
             ||||||||| ||||||||||||
Sbjct: 41343 atttaggaacggagggagtatg 41322

>gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alternatively spliced
          Length = 60615

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     atttaggaagggagggag 18
             ||||||||||||||||||
Sbjct: 51326 atttaggaagggagggag 51309

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 1      atttaggaagggagggagtatg 22
              ||||||||| ||||||||||||
Sbjct: 148115 atttaggaacggagggagtatg 148094

>gb|AC164121.3| Mus musculus BAC clone RP24-406J12 from chromosome 12, complete
             sequence
          Length = 169925

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 5     aggaagggagggagtatgctat 26
             ||||||||| ||||||||||||
Sbjct: 64220 aggaagggaaggagtatgctat 64199

>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence
          Length = 178573

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 1     atttaggaagggagggag 18
             ||||||||||||||||||
Sbjct: 11963 atttaggaagggagggag 11980

>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence
          Length = 214405

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      aggaagggagggagtatg 22
              ||||||||||||||||||
Sbjct: 127957 aggaagggagggagtatg 127974

>emb|AL357137.7| Human DNA sequence from clone RP11-12L8 on chromosome 1 Contains a
             novel gene, the 5' end of the SLC22A15 gene for solute
             carrier family 22 (organic cation transporter), member 15
             and a CpG island, complete sequence
          Length = 100367

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 10    gggagggagtatgctattcctt 31
             |||||||| |||||||||||||
Sbjct: 13578 gggagggactatgctattcctt 13557

>gb|AC111460.6| Rattus norvegicus  BAC CH230-211F21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 218573

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     aggaagggagggagtatg 22
             ||||||||||||||||||
Sbjct: 20249 aggaagggagggagtatg 20266

>gb|AC161234.7| Mus musculus chromosome 1, clone RP24-392G9, complete sequence
          Length = 141914

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 1     atttaggaagggagggag 18
             ||||||||||||||||||
Sbjct: 93365 atttaggaagggagggag 93382

>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a
              ribosomal protein S2 (Rps2) pseudogene, a novel gene, an
              apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene,
              the Rtn4 gene for reticulon 4, the 3' end of the gene for a
              novel protein (C230094A16Rik) (MGC38936) and a CpG island,
              complete sequence
          Length = 212042

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      atttaggaagggagggag 18
              ||||||||||||||||||
Sbjct: 140125 atttaggaagggagggag 140108

>emb|AJ622814.1| Monoclea gottschei mitochondrial partial nad5 gene for NADH
           ubiquinone oxidoreductase subunit 5, exons 1-2
          Length = 2474

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 2   tttaggaagggagggagt 19
           ||||||||||||||||||
Sbjct: 343 tttaggaagggagggagt 360

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                      
Query: 1        atttaggaagggagggagtatg 22
                ||||||||| ||||||||||||
Sbjct: 16134168 atttaggaaaggagggagtatg 16134147



 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 1       atttaggaagggagggagtatg 22
               ||||||||| ||||||||||||
Sbjct: 3816535 atttaggaacggagggagtatg 3816556

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 1      atttaggaagggagggagtatg 22
              ||||||||| ||||||||||||
Sbjct: 395918 atttaggaaaggagggagtatg 395939

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 1       atttaggaagggagggagtatg 22
               ||||||||| ||||||||||||
Sbjct: 5170075 atttaggaaaggagggagtatg 5170054

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 1       atttaggaagggagggagtatg 22
               ||||||||| ||||||||||||
Sbjct: 3054099 atttaggaacggagggagtatg 3054078

>gb|AC147285.3| Pan troglodytes BAC clone RP43-81J3 from chromosome 7, complete sequence
          Length = 150761

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 1      atttaggaagggagggag 18
              ||||||||||||||||||
Sbjct: 117868 atttaggaagggagggag 117885

>gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D18, complete sequence
          Length = 149103

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      atttaggaagggagggag 18
              ||||||||||||||||||
Sbjct: 131584 atttaggaagggagggag 131567

>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 1     atttaggaagggagggagtatg 22
             ||||||||| ||||||||||||
Sbjct: 60957 atttaggaacggagggagtatg 60936

>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1715_A07
          Length = 130907

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 1     atttaggaagggagggagtatg 22
             ||||||||| ||||||||||||
Sbjct: 36789 atttaggaaaggagggagtatg 36768

>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0450B04
          Length = 153268

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 1      atttaggaagggagggagtatg 22
              ||||||||| ||||||||||||
Sbjct: 105432 atttaggaaaggagggagtatg 105453

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                      
Query: 1        atttaggaagggagggagtatg 22
                ||||||||| ||||||||||||
Sbjct: 16087401 atttaggaaaggagggagtatg 16087380



 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 1       atttaggaagggagggagtatg 22
               ||||||||| ||||||||||||
Sbjct: 3816509 atttaggaacggagggagtatg 3816530

>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 92728

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 1     atttaggaagggagggagtatg 22
             ||||||||| ||||||||||||
Sbjct: 23510 atttaggaacggagggagtatg 23489

>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 165955

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 1      atttaggaagggagggagtatg 22
              ||||||||| ||||||||||||
Sbjct: 109175 atttaggaaaggagggagtatg 109196

>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106,
             complete sequence
          Length = 103636

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 1     atttaggaagggagggagtatg 22
             ||||||||| ||||||||||||
Sbjct: 23606 atttaggaacggagggagtatg 23585

>emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chromosome 2, complete
              sequence
          Length = 187340

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      tttaggaagggagggagt 19
              ||||||||||||||||||
Sbjct: 137669 tttaggaagggagggagt 137686

>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds,
            cultivar:Igri
          Length = 11684

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 1    atttaggaagggagggagtatg 22
            ||||||||| ||||||||||||
Sbjct: 7545 atttaggaacggagggagtatg 7566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 338,353
Number of Sequences: 3902068
Number of extensions: 338353
Number of successful extensions: 118243
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117674
Number of HSP's gapped (non-prelim): 569
length of query: 41
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 21
effective length of database: 17,155,003,908
effective search space: 360255082068
effective search space used: 360255082068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)