>EVI2B_MOUSE (Q8VD58) EVI2B protein precursor (Ecotropic viral integration site|
           2B protein)
          Length = 444

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +1

Query: 10  FTETQIPPSQIPSSGRRPKSENSXXXXXXXXXXXXXXXSTLTARGPRPLDPEPPSRKNTS 189
           +T TQ PPS  P+S  +P+ E++                T     P PL  EPPS K T+
Sbjct: 138 YTSTQQPPSPAPTSSGKPEVESTHNQPTKSTPTIYLQRDT-PPPPPPPLTSEPPSGKGTA 196

Query: 190 SR 195
            +
Sbjct: 197 HK 198

>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30|
          Length = 782

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 135 CPRSTPIGPRATIPQEHLVSP 197
           CPRSTPI P   IP  H+  P
Sbjct: 603 CPRSTPIPPATPIPHSHVYQP 623

>HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h)|
          Length = 315

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +1

Query: 1   KRPFTETQIPPSQIPSSGRRPKSENSXXXXXXXXXXXXXXXSTLTARGPRPLDPEPPSRK 180
           K+P   T+ P S  P S  R + +                 +TLT  GP P  P PP   
Sbjct: 189 KKPQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPPPPPPPPPPSP 248

Query: 181 NTSSR 195
            T+++
Sbjct: 249 TTAAK 253

>DOS_HUMAN (Q8N350) Protein Dos|
          Length = 725

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -3

Query: 230 LHDSASDNEATGRDEVFLRDG---GSGSNGRGP 141
           LH +ASD+ ++G D   +R G   GSGS G  P
Sbjct: 466 LHAAASDHSSSGNDRDSVRSGDSSGSGSGGAAP 498

>SRA1_HUMAN (Q9HD15) Steroid receptor RNA activator 1 (Steroid receptor RNA|
           activator protein) (SRAP)
          Length = 236

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 133 TARGPRPLDPEPPSRKNTSSRPVAS 207
           T+ GP P+ P PPS K   S PV S
Sbjct: 68  TSPGPPPMGPPPPSSKAPRSPPVGS 92

>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 142 GPRPLDPEPPSRKNTSSRPVASLSEAESW 228
           GPRP  P+PP R+  +SR    L EA +W
Sbjct: 18  GPRPGSPQPPPRRPWASR---VLQEATNW 43

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 124 STLTARGPRPLDPEPPSRKNTSSRPVASLSEAES 225
           + L A   RP  P PPSR+N    P+ + S   S
Sbjct: 302 AALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSS 335

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/75 (21%), Positives = 29/75 (38%)
 Frame = +1

Query: 1   KRPFTETQIPPSQIPSSGRRPKSENSXXXXXXXXXXXXXXXSTLTARGPRPLDPEPPSRK 180
           +RP    + PP ++P   R  +S +                S+ ++   R    +PP R 
Sbjct: 319 RRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRT 378

Query: 181 NTSSRPVASLSEAES 225
           ++  R    LS + S
Sbjct: 379 SSPPRKTRRLSPSAS 393

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/75 (21%), Positives = 29/75 (38%)
 Frame = +1

Query: 1   KRPFTETQIPPSQIPSSGRRPKSENSXXXXXXXXXXXXXXXSTLTARGPRPLDPEPPSRK 180
           +RP    + PP ++P   R  +S +                S+ ++   R    +PP R 
Sbjct: 319 RRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRT 378

Query: 181 NTSSRPVASLSEAES 225
           ++  R    LS + S
Sbjct: 379 SSPPRKTRRLSPSAS 393

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/75 (21%), Positives = 29/75 (38%)
 Frame = +1

Query: 1   KRPFTETQIPPSQIPSSGRRPKSENSXXXXXXXXXXXXXXXSTLTARGPRPLDPEPPSRK 180
           +RP    + PP ++P   R  +S +                S+ ++   R    +PP R 
Sbjct: 317 RRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRT 376

Query: 181 NTSSRPVASLSEAES 225
           ++  R    LS + S
Sbjct: 377 SSPPRKTRRLSPSAS 391

>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +3

Query: 126 HPHCPRSTPIGPRATIPQEHLVSPSSF 206
           HPH P   P G  A  P EH   P  F
Sbjct: 538 HPHGPADAPPGSPAPPPPEHRGGPEEF 564

>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 151 PLDPEPPSRKNTSSRPVASLSEAESW 228
           P  P+PP+R   S  PVA + +A  W
Sbjct: 409 PAMPQPPNRTFYSPNPVAPVRQAPQW 434


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.302    0.121    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,014,523
Number of Sequences: 219361
Number of extensions: 512148
Number of successful extensions: 1078
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)