ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BIOH_VIBVY (Q7MPY0) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s... 29 4.4
2BIOH_VIBVU (Q8DDU4) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s... 29 4.4
3V1BR_HUMAN (P47901) Vasopressin V1b receptor (V1bR) (AVPR V1b) (... 28 7.6
4NPT3_HUMAN (O00624) Sodium-dependent phosphate transport protein... 28 7.6

>BIOH_VIBVY (Q7MPY0) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 255

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 431 GHAAHLAAVELRHVVSQGVEHPPRR 357
           GH+AHL A  L  +  Q +EH P++
Sbjct: 51  GHSAHLHAASLEEIAQQLLEHAPKQ 75



to top

>BIOH_VIBVU (Q8DDU4) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 255

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 431 GHAAHLAAVELRHVVSQGVEHPPRR 357
           GH+AHL A  L  +  Q +EH P++
Sbjct: 51  GHSAHLHAASLEEIAQQLLEHAPKQ 75



to top

>V1BR_HUMAN (P47901) Vasopressin V1b receptor (V1bR) (AVPR V1b) (Vasopressin V3|
           receptor) (AVPR V3) (Antidiuretic hormone receptor 1b)
          Length = 424

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 9/65 (13%)
 Frame = -3

Query: 437 YAGHAAHLAAVELRHVVSQGVEHPPRR---------GHHPTLPNRSNAGPDENRCFTFTA 285
           Y G  +HL    LRH+   G   P  R           H TL  RS+     +   + T 
Sbjct: 338 YMGFNSHLLPRPLRHLACCGGPQPRMRRRLSDGSLSSRHTTLLTRSSCPATLSLSLSLTL 397

Query: 284 HGRPR 270
            GRPR
Sbjct: 398 SGRPR 402



to top

>NPT3_HUMAN (O00624) Sodium-dependent phosphate transport protein 3|
           (Sodium/phosphate cotransporter 3) (Na(+)/PI
           cotransporter 3) (Solute carrier family 18 member 2)
          Length = 436

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 309 LVWAGV*SVWERWVMPAARRVLNALADDMPEFDRRQMGCMAGI 437
           + W G  ++W +W  P  R  L  +A     F    + C+ G+
Sbjct: 160 MAWTGQFTIWAKWAPPLERSKLTTIAGSGSAFGSFIILCVGGL 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,744,277
Number of Sequences: 219361
Number of extensions: 897573
Number of successful extensions: 2437
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top