>ref|XM_468721.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1964

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 414 cagatgggctgcatggccggcat 436
           |||||||||||||||||||||||
Sbjct: 55  cagatgggctgcatggccggcat 77

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 414      cagatgggctgcatggccggcat 436
                |||||||||||||||||||||||
Sbjct: 17234766 cagatgggctgcatggccggcat 17234788

>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 414   cagatgggctgcatggccggcat 436
             |||||||||||||||||||||||
Sbjct: 67510 cagatgggctgcatggccggcat 67532

>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
              sequence
          Length = 153247

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 414    cagatgggctgcatggccggcat 436
              |||||||||||||||||||||||
Sbjct: 126131 cagatgggctgcatggccggcat 126153

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 414      cagatgggctgcatggccggcat 436
                |||||||||||||||||||||||
Sbjct: 17228307 cagatgggctgcatggccggcat 17228329

>dbj|AK101797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066F10, full
           insert sequence
          Length = 3310

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 414 cagatgggctgcatggccggcat 436
           |||||||||||||||||||||||
Sbjct: 406 cagatgggctgcatggccggcat 428

>dbj|AK099879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111J07, full
           insert sequence
          Length = 3203

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 414 cagatgggctgcatggccggcat 436
           |||||||||||||||||||||||
Sbjct: 341 cagatgggctgcatggccggcat 363

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 257     ccgctgccgcacagcgtggcc 277
               |||||||||||||||||||||
Sbjct: 1248465 ccgctgccgcacagcgtggcc 1248485

>gb|AC113318.8| Mus musculus chromosome 3, clone RP23-442I7, complete sequence
          Length = 213409

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 284   gggcagtgaatgtgaagcagcgatt 308
             |||||||||||||||||||| ||||
Sbjct: 86985 gggcagtgaatgtgaagcagagatt 86961

>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence
          Length = 150646

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 143   tctgcacctgcatccatccac 163
             |||||||||||||||||||||
Sbjct: 64571 tctgcacctgcatccatccac 64551

>dbj|AB063330.1| Paracoccus denitrificans genes for quinohemoprotein amine
            dehydrogenase 60 kDa, unknown, 9 kDa, 40 kDa subunits
          Length = 6273

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 251  cgggtgccgctgccgcacagc 271
            |||||||||||||||||||||
Sbjct: 5100 cgggtgccgctgccgcacagc 5120

>ref|XM_526905.1| PREDICTED: Pan troglodytes erbb2 interacting protein (LOC471527),
           mRNA
          Length = 5001

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 246 ccggccgggtgccgctgccg 265
           ||||||||||||||||||||
Sbjct: 239 ccggccgggtgccgctgccg 258

>gb|AC113945.26| Mus musculus chromosome 3, clone RP24-96D10, complete sequence
          Length = 144239

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ctcctctgctcacgaggctg 39
              ||||||||||||||||||||
Sbjct: 130719 ctcctctgctcacgaggctg 130700

>gb|AC186168.1| Ornithorhynchus anatinus chromosome UNK clone OABb-35C10, complete
              sequence
          Length = 133373

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 282    gtgggcagtgaatgtgaagcagcg 305
              |||||||| |||||||||||||||
Sbjct: 121422 gtgggcagggaatgtgaagcagcg 121445

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    tgccggagttcgaccgccgc 413
              ||||||||||||||||||||
Sbjct: 222694 tgccggagttcgaccgccgc 222713

>ref|XM_380981.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00805.1)
            partial mRNA
          Length = 1989

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    atccaacccaacccgtcttc 20
            ||||||||||||||||||||
Sbjct: 1440 atccaacccaacccgtcttc 1459

>gb|AC125096.3| Mus musculus BAC clone RP24-181K19 from chromosome 18, complete sequence
          Length = 154941

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tctgctcacgaggctgctgc 43
              ||||||||||||||||||||
Sbjct: 142234 tctgctcacgaggctgctgc 142215

>gb|AC131109.3| Mus musculus BAC clone RP23-362M7 from chromosome 18, complete sequence
          Length = 177690

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tctgctcacgaggctgctgc 43
             ||||||||||||||||||||
Sbjct: 52895 tctgctcacgaggctgctgc 52876

>emb|BX842641.1| Neurospora crassa DNA linkage group I BAC contig B22I21
          Length = 124321

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   catcccaagagcctgcaagacttc 138
             ||||||||||||||||||| ||||
Sbjct: 81203 catcccaagagcctgcaagtcttc 81226

>gb|AC008479.6| Homo sapiens chromosome 5 clone CTC-392L24, complete sequence
          Length = 176691

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tcctcctcccaactcacagc 111
             ||||||||||||||||||||
Sbjct: 34990 tcctcctcccaactcacagc 34971

>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence
          Length = 102653

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   aaccttctcctccttttcct 241
             ||||||||||||||||||||
Sbjct: 95670 aaccttctcctccttttcct 95689

>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence
          Length = 79677

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   aaccttctcctccttttcct 241
             ||||||||||||||||||||
Sbjct: 34203 aaccttctcctccttttcct 34184

>gb|AC142502.3| Mus musculus BAC clone RP24-530L11 from 3, complete sequence
          Length = 160259

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  ctcctctgctcacgaggctg 39
           ||||||||||||||||||||
Sbjct: 404 ctcctctgctcacgaggctg 385

>emb|AL805957.12| Mouse DNA sequence from clone RP23-259P7 on chromosome 4, complete
              sequence
          Length = 197911

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     gtcataagtagtaaaacatt 92
              ||||||||||||||||||||
Sbjct: 133412 gtcataagtagtaaaacatt 133431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,798,342
Number of Sequences: 3902068
Number of extensions: 2798342
Number of successful extensions: 63081
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62942
Number of HSP's gapped (non-prelim): 139
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)