>Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114|
          Length = 122

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 21/38 (55%), Positives = 22/38 (57%)
 Frame = -1

Query: 150 GEQSNTW*ILLHNDRKSRHRRIKKQRRYERLAATSQLS 37
           GEQ N W +L   D  SRHR  K  RRYE L A S LS
Sbjct: 66  GEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLLS 103

>PRGR_MOUSE (Q00175) Progesterone receptor (PR)|
          Length = 923

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 377 AQASHASLDSDLEAFSHNPAHGSFAPLAFQPSAMTNCVNQR 255
           A +S ++L+  L      P  GSFAPL  +P A  +C+  R
Sbjct: 446 ASSSGSALECILYKAEAPPTQGSFAPLPCKPPAAASCLLPR 486

>PTH_NANEQ (P61235) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -2

Query: 401 NVGRGERRAQASHASLDSDLEAFSHN 324
           ++G+G+  AQ +HASLD+ L+ + +N
Sbjct: 12  DIGKGKLCAQVAHASLDAALKVYRNN 37

>CEMA_SPIOL (Q9M3L4) Chloroplast envelope membrane protein|
          Length = 229

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 122 CFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFSDT 15
           CF ++G   I G+K  + +N+W+ +  Y   N SDT
Sbjct: 116 CFLILGGYSILGNKELILLNSWVQEFLY---NLSDT 148

>CEMA_ANTFO (Q85AP4) Chloroplast envelope membrane protein|
          Length = 508

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 131 GEFCFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFSDT 15
           G  CFT +G   I G K    +N+W+ ++ Y   + SDT
Sbjct: 392 GMICFTTLGALFILGKKRLSVLNSWIQESFY---SLSDT 427

>HXC11_HUMAN (O43248) Homeobox protein Hox-C11|
          Length = 304

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 146 NNPTLGEFCFTMIGRADIE-GSKSNVAMNAWLPQASYPCGNFSDTSSF 6
           N+  LG FC         + G + + A N +LP  +Y    FS  SSF
Sbjct: 3   NSVNLGNFCSPSRKERGADFGERGSCASNLYLPSCTYYMPEFSTVSSF 50

>BETA_RHILO (Q985M5) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)|
          Length = 550

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 416 GASAPNVGRGERRAQASHASLDSDLEAFSHNPAHGSFAP 300
           G SA +  RG+  +  SH   D DL+ F  + A  ++ P
Sbjct: 429 GQSAFDAFRGQEISPGSHVQSDDDLDVFIRDHAESAYHP 467


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,558,012
Number of Sequences: 219361
Number of extensions: 945967
Number of successful extensions: 2353
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2350
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)