ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl54b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 87.7 bits (44), Expect = 2e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 |||||||||||||||||||||||| | |||||||||||| | ||| ||||||||||||| Sbjct: 17217 cagggttgcgacgggtcggtgctgatcgactcgacggcgagcaacacggcggagaaggac 17276 Query: 289 gcgccgcc 296 |||||||| Sbjct: 17277 gcgccgcc 17284
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 2e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 |||||||||||||||||||||||| | |||||||||||| | ||| ||||||||||||| Sbjct: 25704874 cagggttgcgacgggtcggtgctgatcgactcgacggcgagcaacacggcggagaaggac 25704933 Query: 289 gcgccgcc 296 |||||||| Sbjct: 25704934 gcgccgcc 25704941
>tpe|BN000663.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx134 gene for class III peroxidase 134 precursor, exons 1-2 Length = 1524 Score = 87.7 bits (44), Expect = 2e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 |||||||||||||||||||||||| | |||||||||||| | ||| ||||||||||||| Sbjct: 742 cagggttgcgacgggtcggtgctgatcgactcgacggcgagcaacacggcggagaaggac 801 Query: 289 gcgccgcc 296 |||||||| Sbjct: 802 gcgccgcc 809
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 2e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 |||||||||||||||||||||||| | |||||||||||| | ||| ||||||||||||| Sbjct: 26023544 cagggttgcgacgggtcggtgctgatcgactcgacggcgagcaacacggcggagaaggac 26023603 Query: 289 gcgccgcc 296 |||||||| Sbjct: 26023604 gcgccgcc 26023611
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 85.7 bits (43), Expect = 8e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 1154877 caggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggac 1154818 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggt 323 ||||| || ||| ||||||| || || |||||||| Sbjct: 1154817 gcgcccccgaacacgagcctccgcggcttcgaggt 1154783 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacg 264 ||||| |||||||||||||||||| |||| |||||| Sbjct: 1171265 caggggtgcgacgggtcggtgctgctggagtcgacg 1171230 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 276 ggcggagaaggacgcgccgcccaactcgagcctgcgggggttcgaggtg 324 |||||||||||||||| || ||| ||||||| |||||||||||||| Sbjct: 1159396 ggcggagaaggacgcgataccgaacaagagcctgagggggttcgaggtg 1159348
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 85.7 bits (43), Expect = 8e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 58581 caggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggac 58522 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggt 323 ||||| || ||| ||||||| || || |||||||| Sbjct: 58521 gcgcccccgaacacgagcctccgcggcttcgaggt 58487 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacg 264 ||||| |||||||||||||||||| |||| |||||| Sbjct: 74969 caggggtgcgacgggtcggtgctgctggagtcgacg 74934 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 276 ggcggagaaggacgcgccgcccaactcgagcctgcgggggttcgaggtg 324 |||||||||||||||| || ||| ||||||| |||||||||||||| Sbjct: 63100 ggcggagaaggacgcgataccgaacaagagcctgagggggttcgaggtg 63052
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 85.7 bits (43), Expect = 8e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 1154875 caggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggac 1154816 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggt 323 ||||| || ||| ||||||| || || |||||||| Sbjct: 1154815 gcgcccccgaacacgagcctccgcggcttcgaggt 1154781 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacg 264 ||||| |||||||||||||||||| |||| |||||| Sbjct: 1171263 caggggtgcgacgggtcggtgctgctggagtcgacg 1171228 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 276 ggcggagaaggacgcgccgcccaactcgagcctgcgggggttcgaggtg 324 |||||||||||||||| || ||| ||||||| |||||||||||||| Sbjct: 1159394 ggcggagaaggacgcgataccgaacaagagcctgagggggttcgaggtg 1159346
>dbj|AK120013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-B02, full insert sequence Length = 2375 Score = 85.7 bits (43), Expect = 8e-14 Identities = 82/95 (86%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 984 caggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggac 1043 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggt 323 ||||| || ||| ||||||| || || |||||||| Sbjct: 1044 gcgcccccgaacacgagcctccgcggcttcgaggt 1078
>tpe|BN000562.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx33 gene for class III peroxidase 33 precursor, exons 1-3 Length = 3361 Score = 85.7 bits (43), Expect = 8e-14 Identities = 82/95 (86%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 766 caggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggac 825 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggt 323 ||||| || ||| ||||||| || || |||||||| Sbjct: 826 gcgcccccgaacacgagcctccgcggcttcgaggt 860
>dbj|AK108713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-B05, full insert sequence Length = 1346 Score = 83.8 bits (42), Expect = 3e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 231 gggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgc 290 |||||||||||||||||||||| | |||||||||||| | ||| ||||||||||||||| Sbjct: 323 gggttgcgacgggtcggtgctgatcgactcgacggcgagcaacacggcggagaaggacgc 382 Query: 291 gccgcc 296 |||||| Sbjct: 383 gccgcc 388
>ref|NM_187572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgcgccg 294 ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||| Sbjct: 172 tgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggacgcgccc 231 Query: 295 cccaactcgagcctgcgggggttcgaggt 323 || ||| ||||||| || || |||||||| Sbjct: 232 ccgaacacgagcctccgcggcttcgaggt 260
>dbj|AK103660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H09, full insert sequence Length = 1506 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgcgccg 294 ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||| Sbjct: 394 tgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggacgcgccc 453 Query: 295 cccaactcgagcctgcgggggttcgaggt 323 || ||| ||||||| || || |||||||| Sbjct: 454 ccgaacacgagcctccgcggcttcgaggt 482
>dbj|AK073847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069F06, full insert sequence Length = 1491 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgcgccg 294 ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||| Sbjct: 394 tgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggacgcgccc 453 Query: 295 cccaactcgagcctgcgggggttcgaggt 323 || ||| ||||||| || || |||||||| Sbjct: 454 ccgaacacgagcctccgcggcttcgaggt 482
>dbj|AK060028.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F06, full insert sequence Length = 1147 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgcgccg 294 ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||| Sbjct: 98 tgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggacgcgccc 157 Query: 295 cccaactcgagcctgcgggggttcgaggt 323 || ||| ||||||| || || |||||||| Sbjct: 158 ccgaacacgagcctccgcggcttcgaggt 186
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||| | |||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 96950 caggggtgcgatgcgtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggac 97009 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggtg 324 || ||| ||| | |||||||| |||||||||||| Sbjct: 97010 gccgggccgaacaccagcctgcgtgggttcgaggtg 97045 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtg 249 |||||||||||||||||||||| Sbjct: 92319 tcagggttgcgacgggtcggtg 92340
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||| | |||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 21596 caggggtgcgatgcgtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggac 21655 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggtg 324 || ||| ||| | |||||||| |||||||||||| Sbjct: 21656 gccgggccgaacaccagcctgcgtgggttcgaggtg 21691 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtg 249 |||||||||||||||||||||| Sbjct: 16965 tcagggttgcgacgggtcggtg 16986
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||| | |||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 20381448 caggggtgcgatgcgtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggac 20381507 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggtg 324 || ||| ||| | |||||||| |||||||||||| Sbjct: 20381508 gccgggccgaacaccagcctgcgtgggttcgaggtg 20381543 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtg 249 |||||||||||||||||||||| Sbjct: 20376817 tcagggttgcgacgggtcggtg 20376838
>tpe|BN000657.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx128 gene for class III peroxidase 128 precursor, exons 1-3 Length = 1794 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||| | |||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 332 caggggtgcgatgcgtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggac 391 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggtg 324 || ||| ||| | |||||||| |||||||||||| Sbjct: 392 gccgggccgaacaccagcctgcgtgggttcgaggtg 427
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 79.8 bits (40), Expect = 5e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||| | |||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 20392720 caggggtgcgatgcgtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggac 20392779 Query: 289 gcgccgcccaactcgagcctgcgggggttcgaggtg 324 || ||| ||| | |||||||| |||||||||||| Sbjct: 20392780 gccgggccgaacaccagcctgcgtgggttcgaggtg 20392815 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtg 249 |||||||||||||||||||||| Sbjct: 20388089 tcagggttgcgacgggtcggtg 20388110
>ref|NM_197545.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0040D23.2), mRNA Length = 1204 Score = 75.8 bits (38), Expect = 8e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 243 gtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgcgccgcccaactc 302 |||||||||| | ||||||||| |||||||||||||||||||||||| ||| ||| | Sbjct: 297 gtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggacgccgggccgaacac 356 Query: 303 gagcctgcgggggttcgaggtg 324 |||||||| |||||||||||| Sbjct: 357 cagcctgcgtgggttcgaggtg 378
>dbj|AK105708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E05, full insert sequence Length = 1422 Score = 75.8 bits (38), Expect = 8e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 243 gtcggtgctggtggactcgacggcggggaaccaggcggagaaggacgcgccgcccaactc 302 |||||||||| | ||||||||| |||||||||||||||||||||||| ||| ||| | Sbjct: 406 gtcggtgctgatcgactcgacgaaggggaaccaggcggagaaggacgccgggccgaacac 465 Query: 303 gagcctgcgggggttcgaggtg 324 |||||||| |||||||||||| Sbjct: 466 cagcctgcgtgggttcgaggtg 487
>ref|XM_476367.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 254 tggactcgacggcggggaaccaggcggagaaggacgcgccgc 295 ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 324 tggactcgacgccggggaacaaggcggagaaggactcgccgc 365
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 254 tggactcgacggcggggaaccaggcggagaaggacgcgccgc 295 ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 259035 tggactcgacgccggggaacaaggcggagaaggactcgccgc 259076 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| | ||||||||||| || ||| ||||||||||||| Sbjct: 235325 caggggtgcgacgcgtcggtgctgattgactcgacggccggcaacgtggcggagaaggac 235384 Query: 289 gc 290 || Sbjct: 235385 gc 235386 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 26550487 agcctgcgggggttcgaggtgat 26550509
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 254 tggactcgacggcggggaaccaggcggagaaggacgcgccgc 295 ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 93899 tggactcgacgccggggaacaaggcggagaaggactcgccgc 93940 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| | ||||||||||| || ||| ||||||||||||| Sbjct: 70189 caggggtgcgacgcgtcggtgctgattgactcgacggccggcaacgtggcggagaaggac 70248 Query: 289 gc 290 || Sbjct: 70249 gc 70250
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 254 tggactcgacggcggggaaccaggcggagaaggacgcgccgc 295 ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 11034 tggactcgacgccggggaacaaggcggagaaggactcgccgc 11075
>dbj|AK108824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F05, full insert sequence Length = 1461 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 254 tggactcgacggcggggaaccaggcggagaaggacgcgccgc 295 ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 324 tggactcgacgccggggaacaaggcggagaaggactcgccgc 365
>tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx97 gene for class III peroxidase 97 precursor, exons 1-2 Length = 1107 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacggcggggaaccaggcggagaaggac 288 ||||| ||||||| |||||||||| | ||||||||||| || ||| ||||||||||||| Sbjct: 328 caggggtgcgacgcgtcggtgctgattgactcgacggccggcaacgtggcggagaaggac 387 Query: 289 gc 290 || Sbjct: 388 gc 389
>tpe|BN000624.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx95 gene for class III peroxidase 95 precursor, exons 1-3 Length = 2656 Score = 60.0 bits (30), Expect = 5e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 254 tggactcgacggcggggaaccaggcggagaaggacgcgccgc 295 ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 248 tggactcgacgccggggaacaaggcggagaaggactcgccgc 289
>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete sequence Length = 181910 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 172 gcatgcatgatgtaaatatgaact 195 |||||||||||||||||||||||| Sbjct: 67335 gcatgcatgatgtaaatatgaact 67312
>tpe|BN000564.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx35 gene for class III peroxidase 35 precursor, exons 1-2 Length = 1031 Score = 48.1 bits (24), Expect = 0.018 Identities = 33/36 (91%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcgacg 264 ||||| |||||||||||||||||| |||| |||||| Sbjct: 249 caggggtgcgacgggtcggtgctgctggagtcgacg 284
>ref|XM_479280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1227 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 334 agcctgcgggggttcgaggtgat 356
>ref|XM_506502.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1340_C08.125 mRNA Length = 1231 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 334 agcctgcgggggttcgaggtgat 356
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 gactcgacggcggggaaccaggcggag 282 |||||||||||| |||||||||||||| Sbjct: 7031958 gactcgacggcgcggaaccaggcggag 7031932 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 28030773 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 28030817
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 95758 agcctgcgggggttcgaggtgat 95780
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 gactcgacggcggggaaccaggcggag 282 |||||||||||| |||||||||||||| Sbjct: 52745 gactcgacggcgcggaaccaggcggag 52719
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 gactcgacggcggggaaccaggcggag 282 |||||||||||| |||||||||||||| Sbjct: 91385 gactcgacggcgcggaaccaggcggag 91359
>dbj|AK102122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084O03, full insert sequence Length = 1231 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 334 agcctgcgggggttcgaggtgat 356
>dbj|AK073381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028K07, full insert sequence Length = 1227 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 334 agcctgcgggggttcgaggtgat 356
>dbj|AK070785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065D10, full insert sequence Length = 1739 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Plus Query: 256 gactcgacggcggggaaccaggcggag 282 |||||||||||| |||||||||||||| Sbjct: 553 gactcgacggcgcggaaccaggcggag 579
>tpe|BN000636.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx107 gene for class III peroxidase 107 precursor, exons 1-2 Length = 1067 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 agcctgcgggggttcgaggtgat 326 ||||||||||||||||||||||| Sbjct: 384 agcctgcgggggttcgaggtgat 406
>ref|NM_187575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggactcgacg 264 |||||||||||||||||| |||| |||||| Sbjct: 184 tgcgacgggtcggtgctgctggagtcgacg 213
>gb|AY857761.1| Triticum monococcum peroxidase 7 (POX7) mRNA, complete cds Length = 1319 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggactcgacg 264 |||||||||||||||||| ||||| ||||| Sbjct: 311 tgcgacgggtcggtgctgatggacgcgacg 340
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggac 258 ||||| |||||||||||||||||| ||||| Sbjct: 17880567 caggggtgcgacgggtcggtgctgatggac 17880538
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 229 cagggttgcgacgggtcggtgctggtggac 258 ||||| |||||||||||||||||| ||||| Sbjct: 31386 caggggtgcgacgggtcggtgctgatggac 31357
>gb|AY106450.1| Zea mays PCO105015 mRNA sequence Length = 1470 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaac 300 ||||||||||||||||| |||||||| Sbjct: 361 aggcggagaaggacgcggcgcccaac 386
>tpe|BN000656.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx127 gene for class III peroxidase 127 precursor, exons 1-3 Length = 1127 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtg 249 |||||||||||||||||||||| Sbjct: 286 tcagggttgcgacgggtcggtg 307
>tpe|BN000651.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx122 gene for class III peroxidase 122 precursor, exons 1-3 Length = 2745 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggac 258 ||||| |||||||||||||||||| ||||| Sbjct: 449 caggggtgcgacgggtcggtgctgatggac 478
>ref|NM_187573.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaactcgagcctgcgggggttcgaggtg 324 |||||||||||||||| || ||| ||||||| |||||||||||||| Sbjct: 258 ggcggagaaggacgcgataccgaacaagagcctgagggggttcgaggtg 306
>gb|AY508516.1| Zea mays disrupted peroxidase (pox3) gene, partial sequence; and transposon MITE, complete sequence Length = 1744 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY508163.1| Zea mays cultivar F324 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY508162.1| Zea mays cultivar F227 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY508161.1| Zea mays cultivar F226 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY508160.1| Zea mays cultivar F7012 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY508159.1| Zea mays cultivar Quebec28 disrupted peroxidase (pox3) gene, pox3-2 allele, exons 1 through 3; and transposon MITE, complete sequence Length = 1752 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500812.1| Zea mays cultivar F271 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500811.1| Zea mays cultivar F66 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500810.1| Zea mays cultivar 212 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500809.1| Zea mays cultivar F120 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500808.1| Zea mays cultivar W117 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500807.1| Zea mays cultivar Mo17 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1428 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500806.1| Zea mays cultivar Lan496 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1436 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 376 ggcggagaaggacgcgccacccaac 400
>gb|AY500805.1| Zea mays cultivar MBS847 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500804.1| Zea mays cultivar F7025 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500803.1| Zea mays cultivar F4 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1427 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 379 ggcggagaaggacgcgccacccaac 403
>gb|AY500802.1| Zea mays cultivar F288 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1426 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500801.1| Zea mays cultivar F2 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1413 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 367 ggcggagaaggacgcgccacccaac 391
>gb|AY500800.1| Zea mays cultivar B73 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500799.1| Zea mays cultivar F1 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500798.1| Zea mays cultivar 16 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500797.1| Zea mays cultivar EP1 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 367 ggcggagaaggacgcgccacccaac 391
>gb|AY500796.1| Zea mays cultivar F286 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500795.1| Zea mays cultivar Du101 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1436 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500794.1| Zea mays cultivar F64 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500793.1| Zea mays cultivar F113 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 376 ggcggagaaggacgcgccacccaac 400
>gb|AY500792.1| Zea mays cultivar F564 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 367 ggcggagaaggacgcgccacccaac 391
>gb|AY500791.1| Zea mays cultivar B14 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500790.1| Zea mays cultivar Wis93-3520 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 367 ggcggagaaggacgcgccacccaac 391
>gb|AY500789.1| Zea mays cultivar W64A peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500788.1| Zea mays cultivar Wis94-443 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 367 ggcggagaaggacgcgccacccaac 391
>gb|AY500787.1| Zea mays cultivar DE811 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1422 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 377 ggcggagaaggacgcgccacccaac 401
>gb|AY500786.1| Zea mays cultivar RotalerSilomais peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500785.1| Zea mays cultivar NoordlanderVC145 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1436 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 376 ggcggagaaggacgcgccacccaac 400
>gb|AY500784.1| Zea mays cultivar RainbowFlint peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 368 ggcggagaaggacgcgccacccaac 392
>gb|AY500783.1| Zea mays cultivar PolarDent peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AY500782.1| Zea mays cultivar Sibiriacka peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1413 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 367 ggcggagaaggacgcgccacccaac 391
>gb|AY500781.1| Zea mays cultivar Quebec28 peroxidase (pox3) gene, pox3-1 allele, exons 1 through 3 and partial cds Length = 1426 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 378 ggcggagaaggacgcgccacccaac 402
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcg 261 |||||||||||||| ||||||||| | |||||| Sbjct: 41154 cagggttgcgacggctcggtgctgctcgactcg 41186
>emb|AJ401276.1|ZMA401276 Zea mays partial mRNA for peroxidase (pox3 gene) Length = 1294 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaac 300 |||||||||||||||||| |||||| Sbjct: 253 ggcggagaaggacgcgccacccaac 277
>emb|Y14447.1|XLY14447 Xenopus laevis mRNA for thylacine 2 Length = 1726 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 tgtaaatatgaactgaaaaca 202 ||||||||||||||||||||| Sbjct: 1105 tgtaaatatgaactgaaaaca 1125
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcg 261 |||||||||||||| ||||||||| | |||||| Sbjct: 24438481 cagggttgcgacggctcggtgctgctcgactcg 24438513
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtgctg 252 |||||||||||||| |||||||||| Sbjct: 12538926 tcagggttgcgacgcgtcggtgctg 12538950 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctg 252 ||||||||||||| |||||||||| Sbjct: 42429402 cagggttgcgacgcgtcggtgctg 42429425 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 cccaactcgagcctgcgggggttcgaggtgat 326 |||||| ||||||| ||||| ||||||||||| Sbjct: 12500932 cccaacgcgagcctccggggcttcgaggtgat 12500963
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 75592 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 75636
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtgctg 252 |||||||||||||| |||||||||| Sbjct: 50536 tcagggttgcgacgcgtcggtgctg 50560 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 cccaactcgagcctgcgggggttcgaggtgat 326 |||||| ||||||| ||||| ||||||||||| Sbjct: 12542 cccaacgcgagcctccggggcttcgaggtgat 12573
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtgctg 252 |||||||||||||| |||||||||| Sbjct: 124541 tcagggttgcgacgcgtcggtgctg 124565 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 cccaactcgagcctgcgggggttcgaggtgat 326 |||||| ||||||| ||||| ||||||||||| Sbjct: 86547 cccaacgcgagcctccggggcttcgaggtgat 86578
>dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C11, full insert sequence Length = 5938 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtgctg 252 |||||||||||||| |||||||||| Sbjct: 4717 tcagggttgcgacgcgtcggtgctg 4741
>dbj|AK106002.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A02, full insert sequence Length = 1256 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 294 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 338
>dbj|AK071908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060N22, full insert sequence Length = 2952 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 298 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 342
>dbj|AK070917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065P13, full insert sequence Length = 1259 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 298 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 342
>dbj|AK064633.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H03, full insert sequence Length = 1164 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaactcgagcctgcgggggttcgaggtg 324 |||||||||||||||| || ||| ||||||| |||||||||||||| Sbjct: 312 ggcggagaaggacgcgataccgaacaagagcctgagggggttcgaggtg 360
>dbj|AK061308.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-A05, full insert sequence Length = 1248 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 303 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 347
>tpe|BN000618.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx89 gene for class III peroxidase 89 precursor, exons 1-4 Length = 11159 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 275 aggcggagaaggacgcgccgcccaactcgagcctgcgggggttcg 319 ||||||||||||||||| |||| ||| || ||||||||||||| Sbjct: 359 aggcggagaaggacgcggcgccgaacctgacgctgcgggggttcg 403
>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for class III peroxidase 74 precursor, exons 1-4 Length = 1311 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctggtggactcg 261 |||||||||||||| ||||||||| | |||||| Sbjct: 327 cagggttgcgacggctcggtgctgctcgactcg 359
>tpe|BN000563.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx34 gene for class III peroxidase 34 precursor, exons 1-4 Length = 1461 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 ggcggagaaggacgcgccgcccaactcgagcctgcgggggttcgaggtg 324 |||||||||||||||| || ||| ||||||| |||||||||||||| Sbjct: 373 ggcggagaaggacgcgataccgaacaagagcctgagggggttcgaggtg 421
>tpe|BN000543.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx14 gene for class III peroxidase 14 precursor, exons 1-3 Length = 5620 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 tcagggttgcgacgggtcggtgctg 252 |||||||||||||| |||||||||| Sbjct: 4654 tcagggttgcgacgcgtcggtgctg 4678
>emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chromosome X, complete sequence Length = 174151 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 tgcatgcatgatgtaaatatgaact 195 ||||||||||||||||| ||||||| Sbjct: 28264 tgcatgcatgatgtaaacatgaact 28240
>ref|XM_450976.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggac 258 |||||||||||||||||| ||||| Sbjct: 407 tgcgacgggtcggtgctgatggac 430
>ref|NM_183812.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 cccaactcgagcctgcgggggttcgaggtgat 326 |||||| ||||||| ||||| ||||||||||| Sbjct: 262 cccaacgcgagcctccggggcttcgaggtgat 293
>gb|AC166565.2| Spironucleus vortens clone JGIBAWF-9L17, complete sequence Length = 36230 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 acgggtcggtgctggtggac 258 |||||||||||||||||||| Sbjct: 23452 acgggtcggtgctggtggac 23471
>emb|CR381676.9| Zebrafish DNA sequence from clone CH211-11J2 in linkage group 7, complete sequence Length = 200769 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tgaactgaaaacatggctga 209 |||||||||||||||||||| Sbjct: 26329 tgaactgaaaacatggctga 26310
>emb|AL713923.2| Human DNA sequence from clone RP11-143G3 on chromosome X Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 66834 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 taaatatgaactgaaaacat 203 |||||||||||||||||||| Sbjct: 33611 taaatatgaactgaaaacat 33592
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cggcggggaaccaggcggagaagg 286 |||||||||| ||||||||||||| Sbjct: 6463095 cggcggggaatcaggcggagaagg 6463118
>gb|AC022298.31|AC022298 Mus musculus BAC RP23-423C8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 112209 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaaggttggacagagcttc 35 |||||||||||||||||||| Sbjct: 19319 caaaggttggacagagcttc 19338
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctg 252 ||||||||||||| |||||||||| Sbjct: 88740 cagggttgcgacgcgtcggtgctg 88763
>dbj|AK069281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011F14, full insert sequence Length = 1415 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 tgcgacgggtcggtgctggtggac 258 |||||||||||||||||| ||||| Sbjct: 407 tgcgacgggtcggtgctgatggac 430
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gcgacgggtcggtgctggtg 255 |||||||||||||||||||| Sbjct: 1926253 gcgacgggtcggtgctggtg 1926272
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gcgacgggtcggtgctggtg 255 |||||||||||||||||||| Sbjct: 3444539 gcgacgggtcggtgctggtg 3444558
>dbj|AK058883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B11, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 cccaactcgagcctgcgggggttcgaggtgat 326 |||||| ||||||| ||||| ||||||||||| Sbjct: 61 cccaacgcgagcctccggggcttcgaggtgat 92
>gb|AY106495.1| Zea mays PCO063105 mRNA sequence Length = 1396 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctg 252 ||||| |||||||||||||||||| Sbjct: 349 cagggctgcgacgggtcggtgctg 372
>tpe|BN000550.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx21 gene for class III peroxidase 21 precursor, exons 1-2 Length = 1232 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cagggttgcgacgggtcggtgctg 252 ||||||||||||| |||||||||| Sbjct: 456 cagggttgcgacgcgtcggtgctg 479
>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for class III peroxidase 13 precursor, exons 1-3 Length = 9315 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 cccaactcgagcctgcgggggttcgaggtgat 326 |||||| ||||||| ||||| ||||||||||| Sbjct: 8431 cccaacgcgagcctccggggcttcgaggtgat 8462
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cggcggggaaccaggcggagaagg 286 |||||||||| ||||||||||||| Sbjct: 6462970 cggcggggaatcaggcggagaagg 6462993
>emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa0096K13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138508 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cggcggggaaccaggcggagaagg 286 |||||||||| ||||||||||||| Sbjct: 16235 cggcggggaatcaggcggagaagg 16258
>gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromosome unknown, complete sequence Length = 224517 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 taaatatgaactgaaaacat 203 |||||||||||||||||||| Sbjct: 196433 taaatatgaactgaaaacat 196452 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,032,137 Number of Sequences: 3902068 Number of extensions: 2032137 Number of successful extensions: 34781 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 34358 Number of HSP's gapped (non-prelim): 420 length of query: 326 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 304 effective length of database: 17,147,199,772 effective search space: 5212748730688 effective search space used: 5212748730688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
