>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 1108

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 344 ADDENPEDFIDPETPSGQKKSLAPXMAKQYSPSTVEKSWYAWW 472
           A +ENPEDF+DPETP G++K L+  MAKQYSP+TVEKSWYAWW
Sbjct: 111 ASEENPEDFVDPETPLGERKRLSSQMAKQYSPATVEKSWYAWW 153

>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 1217

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 374 DPETPSGQKKSLAPXMAKQYSPSTVEKSWYAWW 472
           D  TPSG+KK +   +   YSP  VE +WY WW
Sbjct: 230 DIPTPSGEKKDVVSPLPDSYSPQYVEAAWYPWW 262

>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS) (Protein G7a)
          Length = 1263

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 374 DPETPSGQKKSLAPXMAKQYSPSTVEKSWYAWW 472
           D  TP G+KK ++  M   YSP  VE +WY WW
Sbjct: 280 DLPTPPGEKKDVSGAMPDSYSPQYVEAAWYPWW 312

>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 1264

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 374 DPETPSGQKKSLAPXMAKQYSPSTVEKSWYAWW 472
           D  TP G+KK ++  M   YSP  VE +WY WW
Sbjct: 281 DLPTPPGEKKDVSGTMPDSYSPQYVEAAWYPWW 313

>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS) (Protein G7a)
          Length = 1264

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 374 DPETPSGQKKSLAPXMAKQYSPSTVEKSWYAWW 472
           D  TP G+KK ++  M   YSP  VE +WY WW
Sbjct: 281 DLPTPPGEKKDVSGPMPDSYSPRYVEAAWYPWW 313

>SYV_YEAST (P07806) Valyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.9) (Valine--tRNA ligase) (ValRS)
          Length = 1104

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 365 DFIDPETPSGQKK---SLAPXMAKQYSPSTVEKSWYAWW 472
           +FID   P G+KK   SL     K Y+P+ VE SWY WW
Sbjct: 124 EFIDKTVP-GEKKILVSLDDPALKAYNPANVESSWYDWW 161

>SYV_SCHPO (O75005) Probable valyl-tRNA synthetase, mitochondrial precursor|
           (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)
          Length = 980

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = +2

Query: 365 DFIDPETPSGQKKSL----APXMAKQYSPSTVEKSWYAWW 472
           ++++  TP G+KK L    +P + K Y+P  VE +WY WW
Sbjct: 73  EYVEKTTP-GEKKVLQDLDSPAL-KSYNPKAVESAWYDWW 110

>SYV_NEUCR (P28350) Valyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.9) (Valine--tRNA ligase) (ValRS)
          Length = 1093

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 374 DPETPSGQKK---SLAPXMAKQYSPSTVEKSWYAWW 472
           +  TP+G+KK   S        Y+PS VE +WY WW
Sbjct: 118 EDSTPAGEKKVIQSFEHPHFSAYNPSAVEAAWYQWW 153

>SYV_DEHSC (Q3ZZG9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 880

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 413 PXMAKQYSPSTVEKSWYAWW 472
           P MAK Y  + VEK WY +W
Sbjct: 8   PEMAKAYEAAEVEKKWYQYW 27

>SYV_DEHE1 (Q3Z9C5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 880

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 413 PXMAKQYSPSTVEKSWYAWW 472
           P MAK Y  + VEK WY +W
Sbjct: 8   PEMAKAYEAAEVEKKWYQYW 27

>SYV_BACSK (Q5WEQ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 880

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 419 MAKQYSPSTVEKSWYAWW 472
           M  +Y PS  EK WY +W
Sbjct: 7   MPTKYDPSATEKKWYTYW 24

>SYV_THIDA (Q3SL86) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 912

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 419 MAKQYSPSTVEKSWYAWW 472
           +AK + P+ +EK WYA W
Sbjct: 3   LAKSFEPAEIEKRWYARW 20


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,280,737
Number of Sequences: 219361
Number of extensions: 384627
Number of successful extensions: 1268
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)