ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX936460.6| Zebrafish DNA sequence from clone CH211-69N2 in ... 44 0.21
2gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Can... 42 0.85
3gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete se... 42 0.85
4gb|AC148238.4| Medicago truncatula clone mth2-4a11, complete seq... 42 0.85
5emb|AL115327.1|CNS01CBR Botrytis cinerea strain T4 cDNA library 42 0.85
6emb|AL111501.1|CNS019DH Botrytis cinerea strain T4 cDNA library 42 0.85
7gb|AF076998.1|AF076998 HIV-1 isolate VI961 from Democratic Repub... 42 0.85
8gb|AC163640.5| Mus musculus BAC clone RP24-182L3 from chromosome... 40 3.3
9gb|DQ223117.1| Alasmidonta heterodon microsatellite AheB104 sequ... 40 3.3
10gb|AC103612.5| Mus musculus chromosome 5, clone RP24-455E13, com... 40 3.3
11gb|AC160961.3| Mus musculus BAC clone RP24-288N19 from chromosom... 40 3.3
12ref|XM_847213.1| PREDICTED: Canis familiaris similar to sphingos... 40 3.3
13gb|AC125315.4| Mus musculus BAC clone RP24-370B21 from chromosom... 40 3.3
14gb|AC139356.17| Medicago truncatula clone mth2-12c11, complete s... 40 3.3
15emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chr... 40 3.3
16gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, comp... 40 3.3
17gb|AC130003.3| Homo sapiens 3 BAC RP11-705F7 (Roswell Park Cance... 40 3.3
18emb|BX064339.1|CNS09LT3 Single read from an extremity of a full-... 40 3.3
19emb|BX032893.1|CNS08XJL Single read from an extremity of a full-... 40 3.3
20emb|BX030441.1|CNS08VNH Single read from an extremity of a full-... 40 3.3
21emb|BX020588.1|CNS08O1S Single read from an extremity of a full-... 40 3.3
22emb|BX012879.1|CNS08I3N Single read from an extremity of a full-... 40 3.3
23emb|CR392008.7| Zebrafish DNA sequence from clone DKEY-97G11 in ... 40 3.3
24emb|CR855279.1| Human DNA sequence from clone XX-NCIH2171_16D15,... 40 3.3
25gb|AC093903.3| Homo sapiens BAC clone RP11-733C7 from 4, complet... 40 3.3
26gb|AC106878.3| Homo sapiens BAC clone RP11-648O9 from 4, complet... 40 3.3
27gb|AC151520.3| Medicago truncatula chromosome 2 BAC clone mte1-3... 40 3.3
28emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in... 40 3.3
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
31gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosom... 40 3.3
32dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
33gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 3.3
34emb|BX548006.10| Zebrafish DNA sequence from clone DKEY-127P11, ... 40 3.3
35dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
36ref|XM_312784.2| Anopheles gambiae str. PEST ENSANGP00000020450 ... 40 3.3
37gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete se... 40 3.3
38gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2... 40 3.3
39emb|BX649256.12| Zebrafish DNA sequence from clone DKEYP-92A5 in... 40 3.3
40emb|BX957285.9| Zebrafish DNA sequence from clone CH211-160M18 i... 40 3.3
41emb|AL049869.6|CNS0000P Human chromosome 14 DNA sequence BAC R-9... 40 3.3
42dbj|AP003155.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 3.3
43emb|CR456623.14| Zebrafish DNA sequence from clone DKEY-100N10 i... 40 3.3
44emb|AL837524.9| Zebrafish DNA sequence from clone DKEY-50P8, com... 40 3.3
45emb|CT009728.8| Mouse DNA sequence from clone RP23-57I20 on chro... 40 3.3
46gb|U21942.1|SMU21942 Streptococcus mutans galactokinase, galacto... 40 3.3
47gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 3.3 
>emb|BX936460.6| Zebrafish DNA sequence from clone CH211-69N2 in linkage group 9,
             complete sequence
          Length = 79327

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     atggatggatagatagattcca 22
             ||||||||||||||||||||||
Sbjct: 56412 atggatggatagatagattcca 56433
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>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180936

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   ggatctccggcaggaggattt 179
             |||||||||||||||||||||
Sbjct: 57910 ggatctccggcaggaggattt 57930
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>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence
          Length = 152468

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 182    tgctggttcttgctccatttt 202
              |||||||||||||||||||||
Sbjct: 143677 tgctggttcttgctccatttt 143657
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>gb|AC148238.4| Medicago truncatula clone mth2-4a11, complete sequence
          Length = 98424

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 182  tgctggttcttgctccatttt 202
            |||||||||||||||||||||
Sbjct: 8028 tgctggttcttgctccatttt 8008
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>emb|AL115327.1|CNS01CBR Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   atggatggatagatagattccaagt 25
           |||||||||||||||||| ||||||
Sbjct: 722 atggatggatagatagataccaagt 746
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>emb|AL111501.1|CNS019DH Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   atggatggatagatagattccaagt 25
           |||||||||||||||||| ||||||
Sbjct: 583 atggatggatagatagataccaagt 607
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>gb|AF076998.1|AF076998 HIV-1 isolate VI961 from Democratic Republic of the Congo, complete
            genome
          Length = 8990

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 91   caaggatcttttttcttttcctgga 115
            |||||||||||| ||||||||||||
Sbjct: 8496 caaggatcttttgtcttttcctgga 8472
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>gb|AC163640.5| Mus musculus BAC clone RP24-182L3 from chromosome 16, complete sequence
          Length = 168350

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atggatggatagatagattc 20
              ||||||||||||||||||||
Sbjct: 151115 atggatggatagatagattc 151096
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>gb|DQ223117.1| Alasmidonta heterodon microsatellite AheB104 sequence
          Length = 381

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atggatggatagatagattc 20
           ||||||||||||||||||||
Sbjct: 253 atggatggatagatagattc 234
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>gb|AC103612.5| Mus musculus chromosome 5, clone RP24-455E13, complete sequence
          Length = 152420

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 31691 atggatggatagatagattc 31710
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>gb|AC160961.3| Mus musculus BAC clone RP24-288N19 from chromosome 16, complete
            sequence
          Length = 157144

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    atggatggatagatagattc 20
            ||||||||||||||||||||
Sbjct: 4593 atggatggatagatagattc 4574
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>ref|XM_847213.1| PREDICTED: Canis familiaris similar to sphingosine kinase type
            1-interacting protein (LOC609866), mRNA
          Length = 4983

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  ttcttgctccattttgagcc 207
            ||||||||||||||||||||
Sbjct: 1521 ttcttgctccattttgagcc 1502
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>gb|AC125315.4| Mus musculus BAC clone RP24-370B21 from chromosome 19, complete
             sequence
          Length = 155192

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 47959 atggatggatagatagattc 47940
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>gb|AC139356.17| Medicago truncatula clone mth2-12c11, complete sequence
          Length = 120921

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     agcaaggatcttttttcttt 108
              ||||||||||||||||||||
Sbjct: 112397 agcaaggatcttttttcttt 112416
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>emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chromosome 1 Contains
              putative novel transcript, complete sequence
          Length = 174648

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     atcttttttcttttcctgga 115
              ||||||||||||||||||||
Sbjct: 153847 atcttttttcttttcctgga 153828
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>gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, complete sequence
          Length = 193599

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     gaagccaagaacagctccctccca 88
              |||| |||||||||||||||||||
Sbjct: 154952 gaaggcaagaacagctccctccca 154975
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>gb|AC130003.3| Homo sapiens 3 BAC RP11-705F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 129812

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 52684 atggatggatagatagattc 52703
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>emb|BX064339.1|CNS09LT3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC46CC10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 870

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 165 ccggcaggaggatttggtgctggt 188
           ||||||||||||| ||||||||||
Sbjct: 116 ccggcaggaggatgtggtgctggt 93
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>emb|BX032893.1|CNS08XJL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA49AC08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 772

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 165 ccggcaggaggatttggtgctggt 188
           ||||||||||||| ||||||||||
Sbjct: 90  ccggcaggaggatgtggtgctggt 67
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>emb|BX030441.1|CNS08VNH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA45BG05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 851

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 165 ccggcaggaggatttggtgctggt 188
           ||||||||||||| ||||||||||
Sbjct: 85  ccggcaggaggatgtggtgctggt 62
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>emb|BX020588.1|CNS08O1S Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA30BC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 976

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 165 ccggcaggaggatttggtgctggt 188
           ||||||||||||| ||||||||||
Sbjct: 110 ccggcaggaggatgtggtgctggt 87
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>emb|BX012879.1|CNS08I3N Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA2BE10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 890

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 165 ccggcaggaggatttggtgctggt 188
           ||||||||||||| ||||||||||
Sbjct: 90  ccggcaggaggatgtggtgctggt 67
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>emb|CR392008.7| Zebrafish DNA sequence from clone DKEY-97G11 in linkage group 5,
            complete sequence
          Length = 68693

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    atggatggatagatagattc 20
            ||||||||||||||||||||
Sbjct: 5143 atggatggatagatagattc 5162
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>emb|CR855279.1| Human DNA sequence from clone XX-NCIH2171_16D15, complete sequence
          Length = 122131

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    gaagccaagaacagctccctccca 88
             |||| |||||||||||||||||||
Sbjct: 35637 gaaggcaagaacagctccctccca 35660
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>gb|AC093903.3| Homo sapiens BAC clone RP11-733C7 from 4, complete sequence
          Length = 161280

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     tcttttttcttttcctggat 116
              ||||||||||||||||||||
Sbjct: 140598 tcttttttcttttcctggat 140617
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>gb|AC106878.3| Homo sapiens BAC clone RP11-648O9 from 4, complete sequence
          Length = 135342

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aggatcttttttcttttcct 112
             ||||||||||||||||||||
Sbjct: 50535 aggatcttttttcttttcct 50516
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>gb|AC151520.3| Medicago truncatula chromosome 2 BAC clone mte1-34o12, complete
            sequence
          Length = 105113

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   agcaaggatcttttttcttt 108
            ||||||||||||||||||||
Sbjct: 6773 agcaaggatcttttttcttt 6792
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>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      atggatggatagatagattc 20
              ||||||||||||||||||||
Sbjct: 121989 atggatggatagatagattc 122008
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 15      agattccaagtttccaaccc 34
               ||||||||||||||||||||
Sbjct: 7291409 agattccaagtttccaaccc 7291428
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 16       gattccaagtttccaacccc 35
                ||||||||||||||||||||
Sbjct: 29988395 gattccaagtttccaacccc 29988414
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>gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosome 13, complete
             sequence
          Length = 176209

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cagaagccaagaacagctcc 82
             ||||||||||||||||||||
Sbjct: 62965 cagaagccaagaacagctcc 62946
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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0480C01
          Length = 151100

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     gattccaagtttccaacccc 35
              ||||||||||||||||||||
Sbjct: 132953 gattccaagtttccaacccc 132972
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     tacttgtttgctccacgcag 65
              ||||||||||||||||||||
Sbjct: 841383 tacttgtttgctccacgcag 841364
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>emb|BX548006.10| Zebrafish DNA sequence from clone DKEY-127P11, complete sequence
          Length = 158134

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      atggatggatagatagattc 20
              ||||||||||||||||||||
Sbjct: 151472 atggatggatagatagattc 151491
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>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0062A09
          Length = 173541

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    agattccaagtttccaaccc 34
             ||||||||||||||||||||
Sbjct: 25372 agattccaagtttccaaccc 25391
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>ref|XM_312784.2| Anopheles gambiae str. PEST ENSANGP00000020450 (ENSANGG00000017961),
            mRNA
          Length = 1700

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 165  ccggcaggaggatttggtgctggt 188
            ||||||||||||| ||||||||||
Sbjct: 1603 ccggcaggaggatgtggtgctggt 1626
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>gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete sequence
          Length = 140935

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 35801 atggatggatagatagattc 35820
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>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence
          Length = 189949

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ttttttcttttcctggattt 118
             ||||||||||||||||||||
Sbjct: 19310 ttttttcttttcctggattt 19291
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>emb|BX649256.12| Zebrafish DNA sequence from clone DKEYP-92A5 in linkage group 22,
             complete sequence
          Length = 128446

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 14459 atggatggatagatagattc 14478
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>emb|BX957285.9| Zebrafish DNA sequence from clone CH211-160M18 in linkage group 10,
              complete sequence
          Length = 156078

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tagatagattccaagtttcc 29
              ||||||||||||||||||||
Sbjct: 111515 tagatagattccaagtttcc 111534
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>emb|AL049869.6|CNS0000P Human chromosome 14 DNA sequence BAC R-973N13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195840

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    ggatcttttttcttttcctg 113
             ||||||||||||||||||||
Sbjct: 67781 ggatcttttttcttttcctg 67800
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>dbj|AP003155.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-567F3, complete
             sequences
          Length = 157385

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 28114 atggatggatagatagattc 28095
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>emb|CR456623.14| Zebrafish DNA sequence from clone DKEY-100N10 in linkage group 12,
             complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 51657 atggatggatagatagattc 51676
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>emb|AL837524.9| Zebrafish DNA sequence from clone DKEY-50P8, complete sequence
          Length = 202158

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 41733 atggatggatagatagattc 41752
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>emb|CT009728.8| Mouse DNA sequence from clone RP23-57I20 on chromosome 13, complete
             sequence
          Length = 202072

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    cagaagccaagaacagctcc 82
             ||||||||||||||||||||
Sbjct: 34938 cagaagccaagaacagctcc 34957
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>gb|U21942.1|SMU21942 Streptococcus mutans galactokinase, galactose-1-P-uridyl transferase
            and UDP-galactose 4-epimerase genes, complete cds
          Length = 5259

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   tacttgtttgctccacgcag 65
            ||||||||||||||||||||
Sbjct: 3280 tacttgtttgctccacgcag 3261
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atggatggatagatagattc 20
             ||||||||||||||||||||
Sbjct: 35801 atggatggatagatagattc 35820


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,460,435
Number of Sequences: 3902068
Number of extensions: 4460435
Number of successful extensions: 117250
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117076
Number of HSP's gapped (non-prelim): 174
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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