ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl54a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17) 30 4.1
2CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 28 9.2

>OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17)|
          Length = 142

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -3

Query: 120 GERGREWSSWLVSRAPLWLAGERARADGRCCRLSDSE 10
           G R   WS     R   W    +AR  GRC  L D E
Sbjct: 84  GSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEE 120



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>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
 Frame = +3

Query: 393 GNVLYDW----SGDDHCSWRGVLCD 455
           G+ L+DW    S D HCS+ GV CD
Sbjct: 43  GHGLHDWIHSSSPDAHCSFSGVSCD 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,527,626
Number of Sequences: 219361
Number of extensions: 479719
Number of successful extensions: 1811
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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