Clone Name | bastl54a03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17) | 30 | 4.1 | 2 | CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... | 28 | 9.2 |
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>OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17)| Length = 142 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -3 Query: 120 GERGREWSSWLVSRAPLWLAGERARADGRCCRLSDSE 10 G R WS R W +AR GRC L D E Sbjct: 84 GSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEE 120
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 4/25 (16%) Frame = +3 Query: 393 GNVLYDW----SGDDHCSWRGVLCD 455 G+ L+DW S D HCS+ GV CD Sbjct: 43 GHGLHDWIHSSSPDAHCSFSGVSCD 67 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,527,626 Number of Sequences: 219361 Number of extensions: 479719 Number of successful extensions: 1811 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1811 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)