>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1|
          Length = 1588

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
 Frame = -2

Query: 378 CLQDLLPSDG--SSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGRR 205
           C+   L S    +S ++KQ L   L+  PLT  S T+      +   RRT +TS   G  
Sbjct: 358 CISSFLQSSNELASSLKKQ-LPSFLAQTPLTLPSNTKTPPASARQSSRRTRSTS-GKGFE 415

Query: 204 TRTGVPCQS----LRKLSP-----WVLSLPLSFTSSAP------QLPTPPIRGSVERRSS 70
           T+  +   S    L  LSP     W  S P + ++S+P       LPT P+ G     ++
Sbjct: 416 TKISINLDSDIKLLNTLSPLETFFWCCSFPSTASTSSPFSYYPESLPT-PLLGRAVNTTA 474

Query: 69  VPTS 58
            PTS
Sbjct: 475 FPTS 478

>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 464

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 200 GQVSPVNHSGSYHHGCFRCLFLSPPQPLNCLR 105
           GQ++  NH+G     C+RCLF +PP    C R
Sbjct: 219 GQLTVYNHNGG---PCYRCLFPTPPPTSACQR 247

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = -2

Query: 240 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPT 61
           R TTT     RRT T  P +  ++ +    S   S TSS     T PI  S    S + T
Sbjct: 424 RRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVT 483

Query: 60  S 58
           S
Sbjct: 484 S 484

>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase)
          Length = 1327

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 38/141 (26%), Positives = 49/141 (34%)
 Frame = -2

Query: 450 LAPSPY*REGNLGP*RLGPLFVPDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQP 271
           LAP    R G   P   G    PD  +   P DG+S        C+++  P+ P      
Sbjct: 53  LAPFASPRHGLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVP------ 106

Query: 270 ASLWGQGLRRRTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRG 91
                        +TS A G       P  S    SP   S P S +SS+P  P   +  
Sbjct: 107 -----------AVSTSSAAGVAPN---PAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAE 152

Query: 90  SVERRSSVPTSPAGVGEEEEG 28
           S E      T+P G G    G
Sbjct: 153 SPEAAGVSSTAPLGPGAAGPG 173

>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)|
            (FEL protein)
          Length = 1210

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
 Frame = -2

Query: 297  LTPISRTQPASLWGQGLRRRTTTTSLAV---GRRTRTGVPCQSLRKLSPW---------V 154
            L P++ +Q     G G R      ++ V    R+ R  +P +  + LSP          +
Sbjct: 703  LVPLTESQGPPHSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQSLM 762

Query: 153  LSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGR 25
            + + L   S  PQ   PP +GS +R++     PAG     E R
Sbjct: 763  VKITLDLLSRIPQ---PPGKGSRQRKAEDKQPPAGKKHSSEKR 802

>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
 Frame = -1

Query: 406  KTWPPVCSRL----PSGFAPV---GWIFSSGEAKTGLLPL*STIDSDFQNPTCLSVGTRS 248
            K+WPPV SR     P  F P+     + SS  + +G+ P   T D   ++ T L      
Sbjct: 3638 KSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMPTDDYSEESDTDL------ 3691

Query: 247  SEKNDDDESGGGPPNEDRCP 188
            S+K+D   S    P +  CP
Sbjct: 3692 SQKSDGPASPVEGPKDPSCP 3711

>YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor|
          Length = 250

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 250 SSEKNDDDESGGGPPNEDRCPLSIT 176
           S E +DDD+   GP NE   PL +T
Sbjct: 128 SDENDDDDDDDEGPSNESSIPLVVT 152

>SH2D3_MOUSE (Q9QZS8) SH2 domain-containing protein 3C (SH2 domain-containing|
           Eph receptor-binding protein 1) (Cas/HEF1-associated
           signal transducer)
          Length = 854

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 11/130 (8%)
 Frame = -2

Query: 387 VPDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGR 208
           +PD    L P   S           +  P  TP +  QPAS     + RR++   L  G 
Sbjct: 395 IPDLHSPLSPISESPSSPAYSTVTRVHAPSATPSTSAQPAS----PVARRSSEPQLCPGN 450

Query: 207 ---------RTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLP-TPPIRGSVERRS-SVPT 61
                    R     P  +L K SP       S   S       PP+RGS E+ +   P 
Sbjct: 451 TPKPPGESDRAPHASPSHTLCKASPSPSLSSYSDPDSGHYCQLQPPVRGSREQAAGETPR 510

Query: 60  SPAGVGEEEE 31
              G GE ++
Sbjct: 511 KARGSGERQK 520

>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
 Frame = -2

Query: 240 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSS--- 70
           RT      V R      P QS      W  + P S T  AP  P+P    + ER S+   
Sbjct: 77  RTGPPRATVHRPLAATSPAQSPETTPLWATAGPSSTTFQAPLGPSPTTPPAAERTSTTSQ 136

Query: 69  VPTSPA 52
            PT PA
Sbjct: 137 APTRPA 142

>NBEA_CHICK (Q9DDD5) Protein neurobeachin (Fragment)|
          Length = 793

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/77 (24%), Positives = 31/77 (40%)
 Frame = -2

Query: 246 RRRTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSV 67
           +R T  +    GR  R  +        SP     P  F  +     TP     ++  SS+
Sbjct: 684 QRETARSGSQAGRNIRQEIN-------SPTSTETPAVFPENIKDKETPTPVEDIQLESSI 736

Query: 66  PTSPAGVGEEEEGRFLS 16
           P + +G+GEE+    L+
Sbjct: 737 PHTDSGIGEEQMPNILN 753

>MURD_SYNP6 (Q5MZA8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 463

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +3

Query: 249 DLVPTERQVGFWKSESMVDQRGSKPVFASPLEKIHPTG-ANPEGSLEQTGGQVFKGLDSL 425
           + +PT R  GFW  E  V  RG +     P+E+    G  N +  L         G+++ 
Sbjct: 250 EALPTSRDRGFWIEEGWVIDRGDR---LFPVERFSMVGNHNQQNLLMAVAAARLAGIEAE 306

Query: 426 RVSKAM 443
            +++AM
Sbjct: 307 AIAEAM 312

>FUT5_ARATH (Q9SJP4) Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5)|
          Length = 533

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/68 (29%), Positives = 28/68 (41%)
 Frame = -2

Query: 231 TTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPA 52
           T ++    R+  G    SL  L PW+L  P +FT+     P PP   S        T P+
Sbjct: 444 TDNIVTSARSTFGYVSYSLGGLKPWLLYQPTNFTT-----PNPPCVRSKSMEPCYLTPPS 498

Query: 51  GVGEEEEG 28
              E + G
Sbjct: 499 HGCEADWG 506

>ELHA_APLCA (P01360) Atrial gland peptide A precursor (ELH-18) [Contains:|
           Atrial gland peptide A; Califin A; Califin A large
           subunit; Califin A small subunit]
          Length = 173

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 312 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 401
           G++P F +P  + +P G    G +EQ+ GQ
Sbjct: 54  GAQPYFMTPRLRFYPIGKRAAGEMEQSEGQ 83

>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding|
           factor 1) (Cellular transcription factor ILF-1)
          Length = 655

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -2

Query: 240 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQL--PTPPIRGSVERRSSV 67
           + T T+L+  +R +       ++ + P +  L ++   +   L  P P   G++   +S 
Sbjct: 146 KITFTALSSEKREKQEASESPVKAVQPHISPLTINIPDTMAHLISPLPSPTGTISAANSC 205

Query: 66  PTSPAGVG 43
           P+SP G G
Sbjct: 206 PSSPRGAG 213

>ELHL_APLCA (P01361) Atrial gland peptide B precursor (ELH-1L)|
          Length = 122

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 312 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 401
           G++P F +P  + +P G    G +EQ+ GQ
Sbjct: 54  GAQPYFMTPRLRFYPIGKRAAGGMEQSEGQ 83

>NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking regulator 2)|
          Length = 2936

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 144  PLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGRFL 19
            P +F  +  +  TP     ++  SSVP + +G+GEE+    L
Sbjct: 1635 PATFPDTVKEKETPTPGEDIQLESSVPHTDSGMGEEQVASIL 1676

>HUNB_DROMM (O46248) Protein hunchback (Fragments)|
          Length = 158

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = -2

Query: 372 QDLLPSDGSSQVEKQKLACSLSDPPL-TPISRTQPASLWGQGLRRRTTTTSLAVGRRTRT 196
           Q  LP+    Q  KQ+    L  P L  P+    PA++      R TTTT+ A    T  
Sbjct: 46  QSPLPNLQLEQYLKQQQQQPLMPPGLPNPMQTIMPANMRPSPTARTTTTTAAAAPTTTAA 105

Query: 195 GVPCQSLRKLSPWVLSLPLSFT 130
            +  Q+  KL    L+ P+  T
Sbjct: 106 AIAMQANDKLQ--ALTPPMDVT 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,307,524
Number of Sequences: 219361
Number of extensions: 1397278
Number of successful extensions: 5032
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5020
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)