Clone Name | bastl53h09 |
---|---|
Clone Library Name | barley_pub |
>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9| Length = 378 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 264 KHPPPQNRPQGTQQPRTSDSXXXXXXXAESTRETK 160 KH PQ +PQ QP S S ++ST+ K Sbjct: 123 KHSLPQTQPQPQPQPSASSSSSSSSSSSKSTKPRK 157
>ALYS_ENTFA (P37710) Autolysin precursor (EC 3.2.1.-) (Peptidoglycan hydrolase)| (Beta-glycosidase) Length = 737 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 Query: 258 PPPQNRPQGTQQPRTSDSXXXXXXXAESTRETKETISDE 142 P + P T+QP T+DS ES++ET T S E Sbjct: 77 PTTETTPGTTEQP-TTDSSTTTESTTESSKETPTTPSTE 114
>RL15_BRUSU (Q8G090) 50S ribosomal protein L15| Length = 156 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 240 VYFEVAGVCVPAMEEPNAGGGAVAAPEVIAD 332 V FEVAG A+E+ GG++ PE A+ Sbjct: 126 VAFEVAGASKAAVEKIEKAGGSIKLPEAAAE 156
>RL15_BRUME (Q8YHM1) 50S ribosomal protein L15| Length = 156 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 240 VYFEVAGVCVPAMEEPNAGGGAVAAPEVIAD 332 V FEVAG A+E+ GG++ PE A+ Sbjct: 126 VAFEVAGASKAAVEKIEKAGGSIKLPEAAAE 156
>RL15_BRUAB (Q57CS7) 50S ribosomal protein L15| Length = 156 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 240 VYFEVAGVCVPAMEEPNAGGGAVAAPEVIAD 332 V FEVAG A+E+ GG++ PE A+ Sbjct: 126 VAFEVAGASKAAVEKIEKAGGSIKLPEAAAE 156
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 Query: 3 PSLSALQNPSHPPHQKPY 56 PSL+ +Q PSHPP P+ Sbjct: 365 PSLATVQTPSHPPPPYPF 382
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 Query: 3 PSLSALQNPSHPPHQKPY 56 PSL+ +Q PSHPP P+ Sbjct: 361 PSLATVQTPSHPPPPYPF 378
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +3 Query: 255 AGVCVPAMEEPNAGGGAVAAP-EVIAD 332 AG CVPA E P G V AP EV+ D Sbjct: 744 AGACVPAQECPCYAHGTVLAPGEVVHD 770 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,269,816 Number of Sequences: 219361 Number of extensions: 317441 Number of successful extensions: 1442 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1440 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)